RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 LTKP29376 864 aa13.53□□□□□ -0.24
SNF8-211ENST00000512243 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
SNF8-211ENST00000512243 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
SNF8-211ENST00000512243 SLC10A3P09131 477 aa13.52□□□□□ -0.25
SNF8-211ENST00000512243 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
SNF8-211ENST00000512243 SETD1AO15047 1707 aaKnown RBP13.51□□□□□ -0.25
SNF8-211ENST00000512243 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
SNF8-211ENST00000512243 CFHP08603 1231 aa13.51□□□□□ -0.25
SNF8-211ENST00000512243 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
SNF8-211ENST00000512243 PHOX2BQ99453 314 aa13.51□□□□□ -0.25
SNF8-211ENST00000512243 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
SNF8-211ENST00000512243 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
SNF8-211ENST00000512243 BCANQ96GW7 911 aa13.5□□□□□ -0.25
SNF8-211ENST00000512243 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
SNF8-211ENST00000512243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNF8-211ENST00000512243 PRR14Q9BWN1 585 aa13.49□□□□□ -0.25
SNF8-211ENST00000512243 PCDHB3Q9Y5E6 796 aa13.49□□□□□ -0.25
SNF8-211ENST00000512243 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
SNF8-211ENST00000512243 PRAG1Q86YV5 1406 aa13.48□□□□□ -0.25
SNF8-211ENST00000512243 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
SNF8-211ENST00000512243 TRPM1Q7Z4N2 1603 aa13.48□□□□□ -0.25
SNF8-211ENST00000512243 KMT5BQ4FZB7 885 aa13.47□□□□□ -0.25
SNF8-211ENST00000512243 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
SNF8-211ENST00000512243 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
SNF8-211ENST00000512243 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
SNF8-211ENST00000512243 MAP2K5Q13163 448 aa13.46□□□□□ -0.25
SNF8-211ENST00000512243 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
SNF8-211ENST00000512243 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.26
SNF8-211ENST00000512243 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
SNF8-211ENST00000512243 DDX11L8A8MPP1 907 aa13.44□□□□□ -0.26
SNF8-211ENST00000512243 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
SNF8-211ENST00000512243 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
SNF8-211ENST00000512243 ACTN4O43707 911 aaKnown RBP13.43□□□□□ -0.26
SNF8-211ENST00000512243 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
SNF8-211ENST00000512243 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
SNF8-211ENST00000512243 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
SNF8-211ENST00000512243 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
SNF8-211ENST00000512243 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
SNF8-211ENST00000512243 ZPR1O75312 459 aa13.42□□□□□ -0.26
SNF8-211ENST00000512243 RGS20O76081 388 aa13.42□□□□□ -0.26
SNF8-211ENST00000512243 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
SNF8-211ENST00000512243 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
SNF8-211ENST00000512243 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
SNF8-211ENST00000512243 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
SNF8-211ENST00000512243 IRF6O14896 467 aa13.4□□□□□ -0.26
SNF8-211ENST00000512243 CFAP70Q5T0N1 1121 aa13.4□□□□□ -0.26
SNF8-211ENST00000512243 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
SNF8-211ENST00000512243 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
SNF8-211ENST00000512243 TLL1O43897 1013 aa13.39□□□□□ -0.27
SNF8-211ENST00000512243 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
SNF8-211ENST00000512243 ROCK2O75116 1388 aaKnown RBP13.39□□□□□ -0.27
SNF8-211ENST00000512243 METP08581 1390 aa13.39□□□□□ -0.27
SNF8-211ENST00000512243 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
SNF8-211ENST00000512243 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
SNF8-211ENST00000512243 ARHGEF28Q8N1W1 1705 aaKnown RBP13.38□□□□□ -0.27
SNF8-211ENST00000512243 CPS1P31327 1500 aa13.38□□□□□ -0.27
SNF8-211ENST00000512243 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
SNF8-211ENST00000512243 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
SNF8-211ENST00000512243 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
SNF8-211ENST00000512243 YTHDC2Q9H6S0 1430 aaKnown RBP13.37□□□□□ -0.27
SNF8-211ENST00000512243 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
SNF8-211ENST00000512243 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
SNF8-211ENST00000512243 GPRASP1Q5JY77 1395 aa13.35□□□□□ -0.27
SNF8-211ENST00000512243 DLC1Q96QB1 1528 aa13.35□□□□□ -0.27
SNF8-211ENST00000512243 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
SNF8-211ENST00000512243 PTCH1Q13635 1447 aa13.35□□□□□ -0.27
SNF8-211ENST00000512243 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
SNF8-211ENST00000512243 TECPR2O15040 1411 aa13.34□□□□□ -0.27
SNF8-211ENST00000512243 KCNA6P17658 529 aa13.34□□□□□ -0.27
SNF8-211ENST00000512243 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
SNF8-211ENST00000512243 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
SNF8-211ENST00000512243 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
SNF8-211ENST00000512243 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
SNF8-211ENST00000512243 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
SNF8-211ENST00000512243 XIRP1Q702N8 1843 aaKnown RBP13.33□□□□□ -0.28
SNF8-211ENST00000512243 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
SNF8-211ENST00000512243 LTBP4Q8N2S1 1624 aa13.32□□□□□ -0.28
SNF8-211ENST00000512243 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
SNF8-211ENST00000512243 STK26Q9P289 416 aa13.32□□□□□ -0.28
SNF8-211ENST00000512243 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
SNF8-211ENST00000512243 NR1I2O75469 434 aa13.31□□□□□ -0.28
SNF8-211ENST00000512243 FUT2Q10981 343 aa13.31□□□□□ -0.28
SNF8-211ENST00000512243 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
SNF8-211ENST00000512243 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
SNF8-211ENST00000512243 GCGRP47871 477 aa13.3□□□□□ -0.28
SNF8-211ENST00000512243 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
SNF8-211ENST00000512243 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
SNF8-211ENST00000512243 ROBO2Q9HCK4 1378 aa13.3□□□□□ -0.28
SNF8-211ENST00000512243 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
SNF8-211ENST00000512243 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
SNF8-211ENST00000512243 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
SNF8-211ENST00000512243 GGCXP38435 758 aa13.28□□□□□ -0.28
SNF8-211ENST00000512243 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
SNF8-211ENST00000512243 SCUBE3Q8IX30 993 aa13.28□□□□□ -0.28
SNF8-211ENST00000512243 IRX2Q9BZI1 471 aaPredicted RBP13.28□□□□□ -0.28
SNF8-211ENST00000512243 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
SNF8-211ENST00000512243 USP47Q96K76 1375 aa13.27□□□□□ -0.29
SNF8-211ENST00000512243 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.29
SNF8-211ENST00000512243 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
SNF8-211ENST00000512243 ZMYND10O75800 440 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms