RNA–Protein interactions for RNA: ENST00000511566.5

RACK1-225, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3 BASIC

Gene RACK1, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-225ENST00000511566 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
RACK1-225ENST00000511566 ITGB4P16144 1822 aa13.77□□□□□ -0.21
RACK1-225ENST00000511566 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
RACK1-225ENST00000511566 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
RACK1-225ENST00000511566 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
RACK1-225ENST00000511566 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
RACK1-225ENST00000511566 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
RACK1-225ENST00000511566 FYB1O15117 783 aa13.75□□□□□ -0.21
RACK1-225ENST00000511566 AMPHP49418 695 aa13.75□□□□□ -0.21
RACK1-225ENST00000511566 FHDC1Q9C0D6 1143 aaPredicted RBP13.75□□□□□ -0.21
RACK1-225ENST00000511566 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
RACK1-225ENST00000511566 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
RACK1-225ENST00000511566 INSRP06213 1382 aa13.74□□□□□ -0.21
RACK1-225ENST00000511566 FLT4P35916 1363 aa13.74□□□□□ -0.21
RACK1-225ENST00000511566 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
RACK1-225ENST00000511566 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
RACK1-225ENST00000511566 TMF1P82094 1093 aa13.74□□□□□ -0.21
RACK1-225ENST00000511566 DDX54Q8TDD1 881 aaKnown RBP13.74□□□□□ -0.21
RACK1-225ENST00000511566 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
RACK1-225ENST00000511566 SLC27A3Q5K4L6 730 aa13.73□□□□□ -0.21
RACK1-225ENST00000511566 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
RACK1-225ENST00000511566 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
RACK1-225ENST00000511566 MAP2P11137 1827 aaKnown RBP13.73□□□□□ -0.21
RACK1-225ENST00000511566 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
RACK1-225ENST00000511566 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
RACK1-225ENST00000511566 SYT17Q9BSW7 474 aa13.72□□□□□ -0.21
RACK1-225ENST00000511566 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
RACK1-225ENST00000511566 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
RACK1-225ENST00000511566 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.21
RACK1-225ENST00000511566 UBR3Q6ZT12 1888 aa13.71□□□□□ -0.21
RACK1-225ENST00000511566 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
RACK1-225ENST00000511566 KCNQ4P56696 695 aa13.7□□□□□ -0.22
RACK1-225ENST00000511566 ARXQ96QS3 562 aa13.7□□□□□ -0.22
RACK1-225ENST00000511566 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
RACK1-225ENST00000511566 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
RACK1-225ENST00000511566 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
RACK1-225ENST00000511566 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
RACK1-225ENST00000511566 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
RACK1-225ENST00000511566 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
RACK1-225ENST00000511566 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
RACK1-225ENST00000511566 SLC16A10Q8TF71 515 aa13.67□□□□□ -0.22
RACK1-225ENST00000511566 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
RACK1-225ENST00000511566 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
RACK1-225ENST00000511566 EMILIN1Q9Y6C2 1016 aa13.67□□□□□ -0.22
RACK1-225ENST00000511566 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
RACK1-225ENST00000511566 CYP27B1O15528 508 aa13.65□□□□□ -0.22
RACK1-225ENST00000511566 TATP17735 454 aaPredicted RBP13.65□□□□□ -0.22
RACK1-225ENST00000511566 ZNF784Q8NCA9 323 aaPredicted RBP13.64□□□□□ -0.23
RACK1-225ENST00000511566 TFCP2L1Q9NZI6 479 aa13.64□□□□□ -0.23
RACK1-225ENST00000511566 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
RACK1-225ENST00000511566 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
RACK1-225ENST00000511566 POLD1P28340 1107 aa13.62□□□□□ -0.23
RACK1-225ENST00000511566 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
RACK1-225ENST00000511566 NLGN2Q8NFZ4 835 aa13.62□□□□□ -0.23
RACK1-225ENST00000511566 ZNF831Q5JPB2 1677 aa13.62□□□□□ -0.23
RACK1-225ENST00000511566 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
RACK1-225ENST00000511566 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
RACK1-225ENST00000511566 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
RACK1-225ENST00000511566 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
RACK1-225ENST00000511566 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
RACK1-225ENST00000511566 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
RACK1-225ENST00000511566 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
RACK1-225ENST00000511566 KDRP35968 1356 aa13.58□□□□□ -0.23
RACK1-225ENST00000511566 CICQ96RK0 1608 aaPredicted RBP13.58□□□□□ -0.24
RACK1-225ENST00000511566 MSL1Q68DK7 614 aa13.58□□□□□ -0.24
RACK1-225ENST00000511566 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
RACK1-225ENST00000511566 EYA1Q99502 592 aa13.58□□□□□ -0.24
RACK1-225ENST00000511566 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
RACK1-225ENST00000511566 C4AP0C0L4 1744 aa13.58□□□□□ -0.24
RACK1-225ENST00000511566 KIF13BQ9NQT8 1826 aa13.57□□□□□ -0.24
RACK1-225ENST00000511566 CEP350Q5VT06 3117 aa13.56□□□□□ -0.24
RACK1-225ENST00000511566 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
RACK1-225ENST00000511566 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.243e-25■□□□□ 11.3
RACK1-225ENST00000511566 GPR162Q16538 588 aa13.56□□□□□ -0.24
RACK1-225ENST00000511566 PIGBQ92521 554 aa13.56□□□□□ -0.24
RACK1-225ENST00000511566 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
RACK1-225ENST00000511566 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
RACK1-225ENST00000511566 VIRMAQ69YN4 1812 aaKnown RBP13.55□□□□□ -0.24
RACK1-225ENST00000511566 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
RACK1-225ENST00000511566 SMARCC1Q92922 1105 aaPredicted RBP13.55□□□□□ -0.24
RACK1-225ENST00000511566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
RACK1-225ENST00000511566 TJP1Q07157 1748 aa13.55□□□□□ -0.24
RACK1-225ENST00000511566 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
RACK1-225ENST00000511566 SCN11AQ9UI33 1791 aa13.54□□□□□ -0.24
RACK1-225ENST00000511566 MSH5O43196 834 aa13.54□□□□□ -0.24
RACK1-225ENST00000511566 PHKG2P15735 406 aa13.54□□□□□ -0.24
RACK1-225ENST00000511566 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
RACK1-225ENST00000511566 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
RACK1-225ENST00000511566 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
RACK1-225ENST00000511566 SIK1P57059 783 aa13.53□□□□□ -0.24
RACK1-225ENST00000511566 AK7Q96M32 723 aa13.53□□□□□ -0.24
RACK1-225ENST00000511566 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
RACK1-225ENST00000511566 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
RACK1-225ENST00000511566 ITPK1Q13572 414 aa13.52□□□□□ -0.25
RACK1-225ENST00000511566 SMIM5Q71RC9 77 aa13.52□□□□□ -0.25
RACK1-225ENST00000511566 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.25
RACK1-225ENST00000511566 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
RACK1-225ENST00000511566 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
RACK1-225ENST00000511566 ADCY9O60503 1353 aa13.52□□□□□ -0.25
RACK1-225ENST00000511566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms