RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
SH3RF1-205ENST00000511421 EYA1Q99502 592 aa15.89■□□□□ 0.13
SH3RF1-205ENST00000511421 RREB1Q92766 1687 aa15.89■□□□□ 0.13
SH3RF1-205ENST00000511421 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
SH3RF1-205ENST00000511421 PROM2Q8N271 834 aa15.89■□□□□ 0.13
SH3RF1-205ENST00000511421 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
SH3RF1-205ENST00000511421 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
SH3RF1-205ENST00000511421 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
SH3RF1-205ENST00000511421 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
SH3RF1-205ENST00000511421 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
SH3RF1-205ENST00000511421 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
SH3RF1-205ENST00000511421 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
SH3RF1-205ENST00000511421 NUP188Q5SRE5 1749 aa15.85■□□□□ 0.13
SH3RF1-205ENST00000511421 TXNRD1Q16881 649 aa15.84■□□□□ 0.13
SH3RF1-205ENST00000511421 CC2D1BQ5T0F9 858 aaKnown RBP15.83■□□□□ 0.13
SH3RF1-205ENST00000511421 NBPF14Q5TI25 921 aa15.83■□□□□ 0.13
SH3RF1-205ENST00000511421 NPC1L1Q9UHC9 1359 aa15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 IGSF1Q8N6C5 1336 aa15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 PCDH11XQ9BZA7 1347 aa15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 PCDH11YQ9BZA8 1340 aa15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 CYP27B1O15528 508 aa15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 PRIM1P49642 420 aaKnown RBP15.83■□□□□ 0.12
SH3RF1-205ENST00000511421 ANO8Q9HCE9 1232 aaPredicted RBP15.82■□□□□ 0.12
SH3RF1-205ENST00000511421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.81■□□□□ 0.12
SH3RF1-205ENST00000511421 BTAF1O14981 1849 aa15.8■□□□□ 0.12
SH3RF1-205ENST00000511421 MTHFSP49914 203 aa15.8■□□□□ 0.12
SH3RF1-205ENST00000511421 IL13P35225 146 aa15.79■□□□□ 0.12
SH3RF1-205ENST00000511421 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-205ENST00000511421 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
SH3RF1-205ENST00000511421 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
SH3RF1-205ENST00000511421 DOT1LQ8TEK3 1739 aa15.78■□□□□ 0.12
SH3RF1-205ENST00000511421 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
SH3RF1-205ENST00000511421 PLEKHG2Q9H7P9 1386 aa15.78■□□□□ 0.12
SH3RF1-205ENST00000511421 AEBP1Q8IUX7 1158 aa15.77■□□□□ 0.12
SH3RF1-205ENST00000511421 LRRC4BQ9NT99 713 aa15.77■□□□□ 0.12
SH3RF1-205ENST00000511421 CNGB1Q14028 1251 aaPredicted RBP15.76■□□□□ 0.11
SH3RF1-205ENST00000511421 LRP5O75197 1615 aa15.75■□□□□ 0.11
SH3RF1-205ENST00000511421 PHKG2P15735 406 aa15.75■□□□□ 0.11
SH3RF1-205ENST00000511421 SLC15A2Q16348 729 aa15.75■□□□□ 0.11
SH3RF1-205ENST00000511421 IFNL2Q8IZJ0 200 aa15.75■□□□□ 0.11
SH3RF1-205ENST00000511421 KDRP35968 1356 aa15.75■□□□□ 0.11
SH3RF1-205ENST00000511421 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
SH3RF1-205ENST00000511421 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
SH3RF1-205ENST00000511421 STK32BQ9NY57 414 aa15.74■□□□□ 0.11
SH3RF1-205ENST00000511421 PAPPAQ13219 1627 aa15.73■□□□□ 0.11
SH3RF1-205ENST00000511421 PLEKHO1Q53GL0 409 aaPredicted RBP15.73■□□□□ 0.11
SH3RF1-205ENST00000511421 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
SH3RF1-205ENST00000511421 PDGFDQ9GZP0 370 aaPredicted RBP15.73■□□□□ 0.11
SH3RF1-205ENST00000511421 TOGARAM1Q9Y4F4 1720 aa15.73■□□□□ 0.11
SH3RF1-205ENST00000511421 DIAPH1O60610 1272 aaKnown RBP15.72■□□□□ 0.11
SH3RF1-205ENST00000511421 KCNQ4P56696 695 aa15.72■□□□□ 0.11
SH3RF1-205ENST00000511421 ZNF827Q17R98 1081 aa15.71■□□□□ 0.11
SH3RF1-205ENST00000511421 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
SH3RF1-205ENST00000511421 PIGBQ92521 554 aa15.71■□□□□ 0.11
SH3RF1-205ENST00000511421 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.1
SH3RF1-205ENST00000511421 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
SH3RF1-205ENST00000511421 LY75O60449 1722 aa15.7■□□□□ 0.1
SH3RF1-205ENST00000511421 ZNF530Q6P9A1 599 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-205ENST00000511421 CCNL1Q9UK58 526 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-205ENST00000511421 CASZ1Q86V15 1759 aa15.69■□□□□ 0.1
SH3RF1-205ENST00000511421 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
SH3RF1-205ENST00000511421 ITGB4P16144 1822 aa15.68■□□□□ 0.1
SH3RF1-205ENST00000511421 HMOX1P09601 288 aa15.68■□□□□ 0.1
SH3RF1-205ENST00000511421 SPON1Q9HCB6 807 aa15.68■□□□□ 0.1
SH3RF1-205ENST00000511421 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
SH3RF1-205ENST00000511421 PPP2R1AP30153 589 aa15.67■□□□□ 0.1
SH3RF1-205ENST00000511421 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
SH3RF1-205ENST00000511421 DCAF5Q96JK2 942 aa15.67■□□□□ 0.1
SH3RF1-205ENST00000511421 TMOD3Q9NYL9 352 aa15.67■□□□□ 0.1
SH3RF1-205ENST00000511421 ERVV-2B6SEH9 535 aa15.67■□□□□ 0.1
SH3RF1-205ENST00000511421 KDM6AO15550 1401 aaPredicted RBP15.66■□□□□ 0.1
SH3RF1-205ENST00000511421 ZBTB7AO95365 584 aa15.66■□□□□ 0.1
SH3RF1-205ENST00000511421 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
SH3RF1-205ENST00000511421 ASAP1Q9ULH1 1129 aa15.65■□□□□ 0.1
SH3RF1-205ENST00000511421 ATG3Q9NT62 314 aa15.64■□□□□ 0.09
SH3RF1-205ENST00000511421 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
SH3RF1-205ENST00000511421 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 PTGER2P43116 358 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 LOC102724428A0A0B4J2F2 783 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 SIK1P57059 783 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 MTHFSDQ2M296 383 aaKnown RBP15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 MTFR1LQ9H019 292 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 TFCP2L1Q9NZI6 479 aa15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
SH3RF1-205ENST00000511421 CABP4P57796 275 aa15.61■□□□□ 0.09
SH3RF1-205ENST00000511421 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
SH3RF1-205ENST00000511421 HMGB2P26583 209 aaKnown RBP15.6■□□□□ 0.09
SH3RF1-205ENST00000511421 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
SH3RF1-205ENST00000511421 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
SH3RF1-205ENST00000511421 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
SH3RF1-205ENST00000511421 LGR6Q9HBX8 967 aa15.6■□□□□ 0.09
SH3RF1-205ENST00000511421 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
SH3RF1-205ENST00000511421 ZEB1P37275 1124 aaPredicted RBP15.59■□□□□ 0.09
SH3RF1-205ENST00000511421 ITPK1Q13572 414 aa15.59■□□□□ 0.09
SH3RF1-205ENST00000511421 LINC00116Q8NCU8 138 aa15.59■□□□□ 0.09
SH3RF1-205ENST00000511421 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
SH3RF1-205ENST00000511421 PPP1R1BQ9UD71 204 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms