RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 GPRASP1Q5JY77 1395 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 PAIP2Q9BPZ3 127 aaKnown RBP9.78□□□□□ -0.84
HTT-208ENST00000510626 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
HTT-208ENST00000510626 STX1AQ16623 288 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.77□□□□□ -0.84
HTT-208ENST00000510626 CCDC57Q2TAC2 916 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 FSD1Q9BTV5 496 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 PPP1R12BO60237 982 aaPredicted RBP9.77□□□□□ -0.85
HTT-208ENST00000510626 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 SPC24Q8NBT2 197 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 WIZO95785 1651 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 ATF7IPQ6VMQ6 1270 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 HOOK3Q86VS8 718 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.851e-6■■■■□ 22.2
HTT-208ENST00000510626 CCDC94Q9BW85 323 aaPredicted RBP9.77□□□□□ -0.85
HTT-208ENST00000510626 ZSCAN25Q6NSZ9 544 aa9.77□□□□□ -0.85
HTT-208ENST00000510626 HMGB3O15347 200 aaKnown RBP9.77□□□□□ -0.85
HTT-208ENST00000510626 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
HTT-208ENST00000510626 STAMBPO95630 424 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 CCDC175P0C221 793 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 ANKRD50Q9ULJ7 1429 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 U3KPZ7 1027 aaPredicted RBP9.76□□□□□ -0.85
HTT-208ENST00000510626 SPATS2Q86XZ4 545 aaKnown RBP9.76□□□□□ -0.85
HTT-208ENST00000510626 DNAI2Q9GZS0 605 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 TSPYL4Q9UJ04 414 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 DAPK1P53355 1430 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 GTF2A1P52655 376 aaPredicted RBP9.76□□□□□ -0.85
HTT-208ENST00000510626 GABPB1Q06547 395 aaPredicted RBP9.76□□□□□ -0.85
HTT-208ENST00000510626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.76□□□□□ -0.85
HTT-208ENST00000510626 SH2D4BQ5SQS7 431 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 GGT6Q6P531 493 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 KLHL40Q2TBA0 621 aa9.76□□□□□ -0.85
HTT-208ENST00000510626 CTDP1Q9Y5B0 961 aaPredicted RBP9.76□□□□□ -0.85
HTT-208ENST00000510626 CCDC38Q502W7 563 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 EHBP1L1Q8N3D4 1523 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 PPP2R1AP30153 589 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 POTEJP0CG39 1038 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 CKAP4Q07065 602 aaKnown RBP9.75□□□□□ -0.85
HTT-208ENST00000510626 GTF2E1P29083 439 aaPredicted RBP9.75□□□□□ -0.85
HTT-208ENST00000510626 SOX12O15370 315 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 NKTRP30414 1462 aaKnown RBP9.75□□□□□ -0.85
HTT-208ENST00000510626 MAP2K1Q02750 393 aaPredicted RBP9.75□□□□□ -0.85
HTT-208ENST00000510626 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 UBE2HP62256 183 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 USP25Q9UHP3 1055 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.857e-7■■■■■ 490.4
HTT-208ENST00000510626 PPFIA3O75145 1194 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 PDE4CQ08493 712 aa9.75□□□□□ -0.85
HTT-208ENST00000510626 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
HTT-208ENST00000510626 RPAP2Q8IXW5 612 aaPredicted RBP9.74□□□□□ -0.85
HTT-208ENST00000510626 IFI16Q16666 785 aaKnown RBP9.74□□□□□ -0.85
HTT-208ENST00000510626 FMNL3Q8IVF7 1028 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 CCDC196A0A1B0GTZ2 297 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 MYO1BO43795 1136 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 YEATS4O95619 227 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 HSPA4P34932 840 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 CPSF2Q9P2I0 782 aaKnown RBP9.74□□□□□ -0.85
HTT-208ENST00000510626 C6orf163Q5TEZ5 329 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 NSRP1Q9H0G5 558 aaKnown RBP9.74□□□□□ -0.85
HTT-208ENST00000510626 ARFGAP3Q9NP61 516 aa9.74□□□□□ -0.85
HTT-208ENST00000510626 OPA1O60313 960 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 CEP112Q8N8E3 955 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 MIPOL1Q8TD10 442 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 BMP2KLQ5H9B9 411 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 CLIP2Q9UDT6 1046 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 ANKRD18BA2A2Z9 1011 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 ERICH4A6NGS2 130 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
HTT-208ENST00000510626 SYCE3A1L190 88 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 FCHSD2O94868 740 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 FAM114A1Q8IWE2 563 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
HTT-208ENST00000510626 LRRFIP2Q9Y608 721 aaKnown RBP9.73□□□□□ -0.85
HTT-208ENST00000510626 CCDC158Q5M9N0 1113 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 POTEDQ86YR6 584 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 CFAP57Q96MR6 1250 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 OGFRQ9NZT2 677 aa9.73□□□□□ -0.85
HTT-208ENST00000510626 TRIM21P19474 475 aaKnown RBP9.73□□□□□ -0.85
HTT-208ENST00000510626 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 SNX21Q969T3 373 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 PIP4K2BP78356 416 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 A0A1B0GUA9 196 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 SURF6O75683 361 aaKnown RBP9.72□□□□□ -0.85
HTT-208ENST00000510626 TMCO5BA8MYB1 307 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 TNNT1P13805 278 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 PAFAH1B1P43034 410 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 CENPHQ9H3R5 247 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 HMG20BQ9P0W2 317 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 TOP1P11387 765 aaKnown RBP9.72□□□□□ -0.85
HTT-208ENST00000510626 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
HTT-208ENST00000510626 TBC1D32Q96NH3 1257 aa9.72□□□□□ -0.85
HTT-208ENST00000510626 MNAT1P51948 309 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms