RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
SMAD5-206ENST00000509962 TFCP2L1Q9NZI6 479 aa20.72■□□□□ 0.91
SMAD5-206ENST00000509962 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
SMAD5-206ENST00000509962 KCNQ4P56696 695 aa20.71■□□□□ 0.91
SMAD5-206ENST00000509962 RAPGEF4Q8WZA2 1011 aa20.71■□□□□ 0.91
SMAD5-206ENST00000509962 RTL1A6NKG5 1358 aa20.71■□□□□ 0.91
SMAD5-206ENST00000509962 USP47Q96K76 1375 aa20.71■□□□□ 0.91
SMAD5-206ENST00000509962 RGPD2P0DJD1 1756 aa20.7■□□□□ 0.9
SMAD5-206ENST00000509962 POLD1P28340 1107 aa20.7■□□□□ 0.9
SMAD5-206ENST00000509962 CGNL1Q0VF96 1302 aa20.7■□□□□ 0.9
SMAD5-206ENST00000509962 USHBP1Q8N6Y0 703 aa20.69■□□□□ 0.9
SMAD5-206ENST00000509962 SMG6Q86US8 1419 aaKnown RBP20.69■□□□□ 0.9
SMAD5-206ENST00000509962 TATP17735 454 aaPredicted RBP20.68■□□□□ 0.9
SMAD5-206ENST00000509962 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
SMAD5-206ENST00000509962 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
SMAD5-206ENST00000509962 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
SMAD5-206ENST00000509962 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
SMAD5-206ENST00000509962 MEGF6O75095 1541 aa20.66■□□□□ 0.9
SMAD5-206ENST00000509962 GPR162Q16538 588 aa20.65■□□□□ 0.9
SMAD5-206ENST00000509962 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.9
SMAD5-206ENST00000509962 MAP3K5Q99683 1374 aa20.64■□□□□ 0.89
SMAD5-206ENST00000509962 MSH5O43196 834 aa20.64■□□□□ 0.89
SMAD5-206ENST00000509962 NSD2O96028 1365 aa20.63■□□□□ 0.89
SMAD5-206ENST00000509962 INSRP06213 1382 aa20.63■□□□□ 0.89
SMAD5-206ENST00000509962 HMGB2P26583 209 aaKnown RBP20.63■□□□□ 0.89
SMAD5-206ENST00000509962 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
SMAD5-206ENST00000509962 FLT4P35916 1363 aa20.62■□□□□ 0.89
SMAD5-206ENST00000509962 QSER1Q2KHR3 1735 aa20.62■□□□□ 0.89
SMAD5-206ENST00000509962 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
SMAD5-206ENST00000509962 LY75O60449 1722 aa20.61■□□□□ 0.89
SMAD5-206ENST00000509962 SHANK3Q9BYB0 1731 aa20.61■□□□□ 0.89
SMAD5-206ENST00000509962 KIF24Q5T7B8 1368 aa20.61■□□□□ 0.89
SMAD5-206ENST00000509962 PCDH11XQ9BZA7 1347 aa20.61■□□□□ 0.89
SMAD5-206ENST00000509962 PCDH11YQ9BZA8 1340 aa20.61■□□□□ 0.89
SMAD5-206ENST00000509962 PPM1GO15355 546 aaPredicted RBP20.6■□□□□ 0.89
SMAD5-206ENST00000509962 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
SMAD5-206ENST00000509962 CHD4Q14839 1912 aa20.6■□□□□ 0.89
SMAD5-206ENST00000509962 COL23A1Q86Y22 540 aaPredicted RBP20.59■□□□□ 0.89
SMAD5-206ENST00000509962 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
SMAD5-206ENST00000509962 TIMELESSQ9UNS1 1208 aa20.59■□□□□ 0.89
SMAD5-206ENST00000509962 KIF20BQ96Q89 1820 aa20.58■□□□□ 0.89
SMAD5-206ENST00000509962 EMILIN1Q9Y6C2 1016 aa20.58■□□□□ 0.89
SMAD5-206ENST00000509962 CYP27B1O15528 508 aa20.56■□□□□ 0.88
SMAD5-206ENST00000509962 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
SMAD5-206ENST00000509962 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
SMAD5-206ENST00000509962 FLAD1Q8NFF5 587 aa20.55■□□□□ 0.88
SMAD5-206ENST00000509962 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
SMAD5-206ENST00000509962 COL24A1Q17RW2 1714 aa20.54■□□□□ 0.88
SMAD5-206ENST00000509962 NLGN2Q8NFZ4 835 aa20.54■□□□□ 0.88
SMAD5-206ENST00000509962 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
SMAD5-206ENST00000509962 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
SMAD5-206ENST00000509962 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
SMAD5-206ENST00000509962 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
SMAD5-206ENST00000509962 MSL1Q68DK7 614 aa20.52■□□□□ 0.88
SMAD5-206ENST00000509962 GRIN3BO60391 1043 aa20.5■□□□□ 0.87
SMAD5-206ENST00000509962 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
SMAD5-206ENST00000509962 PIGBQ92521 554 aa20.5■□□□□ 0.87
SMAD5-206ENST00000509962 EYA1Q99502 592 aa20.5■□□□□ 0.87
SMAD5-206ENST00000509962 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
SMAD5-206ENST00000509962 AK7Q96M32 723 aa20.49■□□□□ 0.87
SMAD5-206ENST00000509962 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
SMAD5-206ENST00000509962 C5P01031 1676 aa20.48■□□□□ 0.87
SMAD5-206ENST00000509962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.48■□□□□ 0.874e-12■□□□□ 9.3
SMAD5-206ENST00000509962 POLKQ9UBT6 870 aa20.48■□□□□ 0.87
SMAD5-206ENST00000509962 ITGB4P16144 1822 aa20.47■□□□□ 0.87
SMAD5-206ENST00000509962 TNNT2P45379 298 aaPredicted RBP20.46■□□□□ 0.87
SMAD5-206ENST00000509962 IFNL2Q8IZJ0 200 aa20.46■□□□□ 0.87
SMAD5-206ENST00000509962 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
SMAD5-206ENST00000509962 CD2APQ9Y5K6 639 aa20.46■□□□□ 0.87
SMAD5-206ENST00000509962 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
SMAD5-206ENST00000509962 C1QTNF8P60827 252 aa20.45■□□□□ 0.86
SMAD5-206ENST00000509962 TAF1LQ8IZX4 1826 aa20.45■□□□□ 0.86
SMAD5-206ENST00000509962 UTRNP46939 3433 aa20.44■□□□□ 0.86
SMAD5-206ENST00000509962 PHF14O94880 888 aa20.44■□□□□ 0.86
SMAD5-206ENST00000509962 YBX3P16989 372 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMAD5-206ENST00000509962 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
SMAD5-206ENST00000509962 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
SMAD5-206ENST00000509962 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
SMAD5-206ENST00000509962 SIK1P57059 783 aa20.43■□□□□ 0.86
SMAD5-206ENST00000509962 TOGARAM1Q9Y4F4 1720 aa20.42■□□□□ 0.86
SMAD5-206ENST00000509962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.42■□□□□ 0.86
SMAD5-206ENST00000509962 PHKG2P15735 406 aa20.42■□□□□ 0.86
SMAD5-206ENST00000509962 ASAP1Q9ULH1 1129 aa20.42■□□□□ 0.86
SMAD5-206ENST00000509962 C4BP0C0L5 1744 aa20.41■□□□□ 0.86
SMAD5-206ENST00000509962 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
SMAD5-206ENST00000509962 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
SMAD5-206ENST00000509962 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMAD5-206ENST00000509962 EIF4A2Q14240 407 aaKnown RBP20.41■□□□□ 0.86
SMAD5-206ENST00000509962 GIGYF1O75420 1035 aaPredicted RBP20.4■□□□□ 0.86
SMAD5-206ENST00000509962 SSFA2P28290 1259 aa20.4■□□□□ 0.86
SMAD5-206ENST00000509962 SMIM5Q71RC9 77 aa20.4■□□□□ 0.86
SMAD5-206ENST00000509962 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
SMAD5-206ENST00000509962 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.85
SMAD5-206ENST00000509962 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.85
SMAD5-206ENST00000509962 PANK3Q9H999 370 aa20.39■□□□□ 0.85
SMAD5-206ENST00000509962 ATG3Q9NT62 314 aa20.38■□□□□ 0.85
SMAD5-206ENST00000509962 GNPATO15228 680 aa20.37■□□□□ 0.85
SMAD5-206ENST00000509962 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
SMAD5-206ENST00000509962 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
SMAD5-206ENST00000509962 ITPK1Q13572 414 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms