RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 DZIP3Q86Y13 1208 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-226ENST00000508635 SCARF2Q96GP6 870 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-226ENST00000508635 C1QTNF2Q9BXJ5 285 aa6.29□□□□□ -1.4
UBE2D3-226ENST00000508635 PROSER2Q86WR7 435 aaPredicted RBP6.28□□□□□ -1.4
UBE2D3-226ENST00000508635 WWC1Q8IX03 1113 aa6.28□□□□□ -1.4
UBE2D3-226ENST00000508635 SLC10A4Q96EP9 437 aa6.28□□□□□ -1.4
UBE2D3-226ENST00000508635 ZNF330Q9Y3S2 320 aaPredicted RBP6.28□□□□□ -1.4
UBE2D3-226ENST00000508635 POM121CA8CG34 1229 aa6.27□□□□□ -1.41
UBE2D3-226ENST00000508635 MARSP56192 900 aaKnown RBP6.27□□□□□ -1.41
UBE2D3-226ENST00000508635 RAB15P59190 212 aa6.27□□□□□ -1.41
UBE2D3-226ENST00000508635 WASHC4Q2M389 1173 aa6.27□□□□□ -1.41
UBE2D3-226ENST00000508635 VASH1Q7L8A9 365 aaPredicted RBP6.27□□□□□ -1.41
UBE2D3-226ENST00000508635 ZMYND15Q9H091 742 aa6.27□□□□□ -1.41
UBE2D3-226ENST00000508635 A6NJR5 290 aa6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 BTBD11A6QL63 1104 aa6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 FSHRP23945 695 aa6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 MRPL14Q6P1L8 145 aaKnown RBP6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 TRMT44Q8IYL2 757 aaKnown RBP6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 KLF16Q9BXK1 252 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
UBE2D3-226ENST00000508635 PRDM2Q13029 1718 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 PPFIA3O75145 1194 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 GRM5P41594 1212 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 EIF4G2P78344 907 aaKnown RBP eCLIP6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 Q8N3U1 123 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 FNBP4Q8N3X1 1017 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 SVOPQ8N4V2 548 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 CDK15Q96Q40 435 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 KCTD15Q96SI1 283 aaPredicted RBP6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 TIMELESSQ9UNS1 1208 aa6.25□□□□□ -1.41
UBE2D3-226ENST00000508635 ADH1CP00326 375 aa6.24□□□□□ -1.41
UBE2D3-226ENST00000508635 SEMA3FQ13275 785 aa6.24□□□□□ -1.41
UBE2D3-226ENST00000508635 ZNF777Q9ULD5 760 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-226ENST00000508635 TOPBP1Q92547 1522 aa6.24□□□□□ -1.41
UBE2D3-226ENST00000508635 TRAK2O60296 914 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 GIGYF1O75420 1035 aaPredicted RBP6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 NR3C2P08235 984 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 NNTQ13423 1086 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 MPNDQ8N594 471 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 CNTNAP3BQ96NU0 1288 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 CNTNAP3Q9BZ76 1288 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 MAP4K5Q9Y4K4 846 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 ABCC8Q09428 1581 aa6.23□□□□□ -1.41
UBE2D3-226ENST00000508635 IFT140Q96RY7 1462 aa6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 MAN1A2O60476 641 aa6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 NBPF20Q3BBV1 942 aa6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 INTS6LQ5JSJ4 861 aaKnown RBP6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 HDGFL1Q5TGJ6 251 aa6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 CEP126Q9P2H0 1117 aa6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 CDV3Q9UKY7 258 aaKnown RBP6.22□□□□□ -1.41
UBE2D3-226ENST00000508635 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 K7ELQ4 463 aaPredicted RBP6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 NR5A1Q13285 461 aa6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 ADAMTS19Q8TE59 1207 aa6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 PURBQ96QR8 312 aaKnown RBP6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 SPOCK3Q9BQ16 436 aa6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 ALG2Q9H553 416 aa6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 DNMBPQ6XZF7 1577 aa6.21□□□□□ -1.42
UBE2D3-226ENST00000508635 SUPT5HO00267 1087 aaKnown RBP6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 ARHGEF15O94989 841 aa6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 WDR4P57081 412 aaKnown RBP6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 MCCD1P59942 119 aaPredicted RBP6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 KRT76Q01546 638 aa6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 CCDC116Q8IYX3 515 aa6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 GLMNQ92990 594 aa6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 TMPRSS4Q9NRS4 437 aa6.2□□□□□ -1.42
UBE2D3-226ENST00000508635 ARID3CA6NKF2 412 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 SOBPA7XYQ1 873 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 ESPNB1AK53 854 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 PIK3CDO00329 1044 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 TIMP2P16035 220 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 SOX11P35716 441 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 PLA2G4EQ3MJ16 856 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 TSGA10IPQ3SY00 556 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 SLFNL1Q499Z3 407 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 PPP1R26Q5T8A7 1209 aaPredicted RBP6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 RNF135Q8IUD6 432 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 GALNT6Q8NCL4 622 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 CALR3Q96L12 384 aaKnown RBP6.19□□□□□ -1.42
UBE2D3-226ENST00000508635 SLURP2P0DP57 97 aa6.18□□□□□ -1.42
UBE2D3-226ENST00000508635 ITPKCQ96DU7 683 aa6.18□□□□□ -1.42
UBE2D3-226ENST00000508635 ZFAND3Q9H8U3 227 aa6.18□□□□□ -1.42
UBE2D3-226ENST00000508635 POLA1P09884 1462 aaPredicted RBP6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 ZIC2O95409 532 aaPredicted RBP6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 DHX9Q08211 1270 aaKnown RBP6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 RNF20Q5VTR2 975 aa6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 CYLDQ9NQC7 956 aa6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 EMILIN1Q9Y6C2 1016 aa6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 TARBP1Q13395 1621 aaKnown RBP6.17□□□□□ -1.42
UBE2D3-226ENST00000508635 AQRO60306 1485 aaKnown RBP eCLIP6.16□□□□□ -1.422e-7■■■□□ 15.8
UBE2D3-226ENST00000508635 EIF4G3O43432 1585 aaKnown RBP6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 PHF20L1A8MW92 1017 aa6.16□□□□□ -1.42
UBE2D3-226ENST00000508635 SKIP12755 728 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms