RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 EIF4A2Q14240 407 aaKnown RBP32.93■■■□□ 2.86
SRPK1-210ENST00000508473 CC2D1BQ5T0F9 858 aaKnown RBP32.93■■■□□ 2.86
SRPK1-210ENST00000508473 EYA1Q99502 592 aa32.93■■■□□ 2.86
SRPK1-210ENST00000508473 CNGB1Q14028 1251 aaPredicted RBP32.92■■■□□ 2.86
SRPK1-210ENST00000508473 PLSCR1O15162 318 aa32.91■■■□□ 2.86
SRPK1-210ENST00000508473 R3HDM1Q15032 1099 aaKnown RBP32.89■■■□□ 2.86
SRPK1-210ENST00000508473 NCAPD2Q15021 1401 aa32.85■■■□□ 2.85
SRPK1-210ENST00000508473 NHSQ6T4R5 1651 aa32.85■■■□□ 2.85
SRPK1-210ENST00000508473 RREB1Q92766 1687 aa32.85■■■□□ 2.85
SRPK1-210ENST00000508473 SHANK3Q9BYB0 1731 aa32.83■■■□□ 2.85
SRPK1-210ENST00000508473 KAT6BQ8WYB5 2073 aa32.83■■■□□ 2.85
SRPK1-210ENST00000508473 PROM2Q8N271 834 aa32.83■■■□□ 2.85
SRPK1-210ENST00000508473 SYTL4Q96C24 671 aaPredicted RBP32.83■■■□□ 2.85
SRPK1-210ENST00000508473 PRIM1P49642 420 aaKnown RBP32.82■■■□□ 2.84
SRPK1-210ENST00000508473 NBPF14Q5TI25 921 aa32.82■■■□□ 2.84
SRPK1-210ENST00000508473 NUP188Q5SRE5 1749 aa32.82■■■□□ 2.84
SRPK1-210ENST00000508473 PCDH11XQ9BZA7 1347 aa32.8■■■□□ 2.84
SRPK1-210ENST00000508473 PCDH11YQ9BZA8 1340 aa32.8■■■□□ 2.84
SRPK1-210ENST00000508473 TXNRD1Q16881 649 aa32.8■■■□□ 2.84
SRPK1-210ENST00000508473 MTHFSP49914 203 aa32.79■■■□□ 2.84
SRPK1-210ENST00000508473 CYP27B1O15528 508 aa32.78■■■□□ 2.84
SRPK1-210ENST00000508473 IGSF1Q8N6C5 1336 aa32.77■■■□□ 2.84
SRPK1-210ENST00000508473 RGPD3A6NKT7 1758 aaPredicted RBP32.77■■■□□ 2.84
SRPK1-210ENST00000508473 RGPD4Q7Z3J3 1758 aa32.77■■■□□ 2.84
SRPK1-210ENST00000508473 NPC1L1Q9UHC9 1359 aa32.76■■■□□ 2.83
SRPK1-210ENST00000508473 SPG7Q9UQ90 795 aa32.76■■■□□ 2.83
SRPK1-210ENST00000508473 ANO8Q9HCE9 1232 aaPredicted RBP32.74■■■□□ 2.83
SRPK1-210ENST00000508473 BTAF1O14981 1849 aa32.74■■■□□ 2.83
SRPK1-210ENST00000508473 DOT1LQ8TEK3 1739 aa32.73■■■□□ 2.83
SRPK1-210ENST00000508473 IL13P35225 146 aa32.72■■■□□ 2.83
SRPK1-210ENST00000508473 AEBP1Q8IUX7 1158 aa32.71■■■□□ 2.83
SRPK1-210ENST00000508473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.7■■■□□ 2.834e-9■■□□□ 13.9
SRPK1-210ENST00000508473 PKD1L3Q7Z443 1732 aa32.7■■■□□ 2.83
SRPK1-210ENST00000508473 SULT6B1Q6IMI4 303 aa32.68■■■□□ 2.82
SRPK1-210ENST00000508473 PHKG2P15735 406 aa32.64■■■□□ 2.82
SRPK1-210ENST00000508473 NKX1-1Q15270 411 aaPredicted RBP32.64■■■□□ 2.82
SRPK1-210ENST00000508473 MPRIPQ6WCQ1 1025 aa32.64■■■□□ 2.82
SRPK1-210ENST00000508473 IFNL2Q8IZJ0 200 aa32.64■■■□□ 2.82
SRPK1-210ENST00000508473 LRRC4BQ9NT99 713 aa32.64■■■□□ 2.82
SRPK1-210ENST00000508473 STK32BQ9NY57 414 aa32.64■■■□□ 2.82
SRPK1-210ENST00000508473 DIAPH1O60610 1272 aaKnown RBP32.62■■■□□ 2.81
SRPK1-210ENST00000508473 KCNQ4P56696 695 aa32.62■■■□□ 2.81
SRPK1-210ENST00000508473 PLEKHO1Q53GL0 409 aaPredicted RBP32.62■■■□□ 2.81
SRPK1-210ENST00000508473 SRCAPQ6ZRS2 3230 aa32.6■■■□□ 2.81
SRPK1-210ENST00000508473 HMOX1P09601 288 aa32.59■■■□□ 2.81
SRPK1-210ENST00000508473 SLC15A2Q16348 729 aa32.59■■■□□ 2.81
SRPK1-210ENST00000508473 SLC27A3Q5K4L6 730 aa32.58■■■□□ 2.81
SRPK1-210ENST00000508473 ZNF530Q6P9A1 599 aaPredicted RBP32.58■■■□□ 2.81
SRPK1-210ENST00000508473 KDRP35968 1356 aa32.58■■■□□ 2.81
SRPK1-210ENST00000508473 PLEKHG2Q9H7P9 1386 aa32.58■■■□□ 2.81
SRPK1-210ENST00000508473 TOGARAM1Q9Y4F4 1720 aa32.57■■■□□ 2.81
SRPK1-210ENST00000508473 AMOTQ4VCS5 1084 aa32.57■■■□□ 2.8
SRPK1-210ENST00000508473 PDGFDQ9GZP0 370 aaPredicted RBP32.57■■■□□ 2.8
SRPK1-210ENST00000508473 PIGBQ92521 554 aa32.56■■■□□ 2.8
SRPK1-210ENST00000508473 CCNL1Q9UK58 526 aaPredicted RBP32.55■■■□□ 2.8
SRPK1-210ENST00000508473 ZNF827Q17R98 1081 aa32.54■■■□□ 2.8
SRPK1-210ENST00000508473 LRP5O75197 1615 aa32.53■■■□□ 2.8
SRPK1-210ENST00000508473 PPP2R1AP30153 589 aa32.53■■■□□ 2.8
SRPK1-210ENST00000508473 COL3A1P02461 1466 aaPredicted RBP32.53■■■□□ 2.8
SRPK1-210ENST00000508473 U2SURPO15042 1029 aaKnown RBP32.52■■■□□ 2.8
SRPK1-210ENST00000508473 TMOD3Q9NYL9 352 aa32.52■■■□□ 2.8
SRPK1-210ENST00000508473 PAPPAQ13219 1627 aa32.51■■■□□ 2.8
SRPK1-210ENST00000508473 PALLDQ8WX93 1383 aa32.51■■■□□ 2.79
SRPK1-210ENST00000508473 HSP90AB1P08238 724 aaKnown RBP32.5■■■□□ 2.79
SRPK1-210ENST00000508473 C1orf141Q5JVX7 400 aa32.5■■■□□ 2.79
SRPK1-210ENST00000508473 ITGB4P16144 1822 aa32.49■■■□□ 2.79
SRPK1-210ENST00000508473 CFAP53Q96M91 514 aa32.49■■■□□ 2.79
SRPK1-210ENST00000508473 SMARCC1Q92922 1105 aaPredicted RBP32.48■■■□□ 2.79
SRPK1-210ENST00000508473 AKT1S1Q96B36 256 aa32.48■■■□□ 2.79
SRPK1-210ENST00000508473 DCAF5Q96JK2 942 aa32.48■■■□□ 2.79
SRPK1-210ENST00000508473 LY75O60449 1722 aa32.48■■■□□ 2.79
SRPK1-210ENST00000508473 ZBTB7AO95365 584 aa32.47■■■□□ 2.79
SRPK1-210ENST00000508473 DDX10Q13206 875 aaKnown RBP32.47■■■□□ 2.79
SRPK1-210ENST00000508473 SPON1Q9HCB6 807 aa32.47■■■□□ 2.79
SRPK1-210ENST00000508473 ZEB1P37275 1124 aaPredicted RBP32.45■■■□□ 2.79
SRPK1-210ENST00000508473 ASAP1Q9ULH1 1129 aa32.45■■■□□ 2.79
SRPK1-210ENST00000508473 KDM6AO15550 1401 aaPredicted RBP32.44■■■□□ 2.78
SRPK1-210ENST00000508473 CASZ1Q86V15 1759 aa32.43■■■□□ 2.78
SRPK1-210ENST00000508473 ERVV-2B6SEH9 535 aa32.43■■■□□ 2.78
SRPK1-210ENST00000508473 TFCP2L1Q9NZI6 479 aa32.42■■■□□ 2.78
SRPK1-210ENST00000508473 ATF5Q9Y2D1 282 aaPredicted RBP32.42■■■□□ 2.78
SRPK1-210ENST00000508473 CABP4P57796 275 aa32.41■■■□□ 2.78
SRPK1-210ENST00000508473 ATG3Q9NT62 314 aa32.41■■■□□ 2.78
SRPK1-210ENST00000508473 MTHFSDQ2M296 383 aaKnown RBP32.4■■■□□ 2.78
SRPK1-210ENST00000508473 AKAP4Q5JQC9 854 aa32.4■■■□□ 2.78
SRPK1-210ENST00000508473 NUDCQ9Y266 331 aa32.38■■■□□ 2.77
SRPK1-210ENST00000508473 PNPLA7Q6ZV29 1317 aa32.37■■■□□ 2.77
SRPK1-210ENST00000508473 LOC102724428A0A0B4J2F2 783 aa32.37■■■□□ 2.77
SRPK1-210ENST00000508473 SIK1P57059 783 aa32.37■■■□□ 2.77
SRPK1-210ENST00000508473 PPP1R1BQ9UD71 204 aaPredicted RBP32.36■■■□□ 2.77
SRPK1-210ENST00000508473 U2AF1L5P0DN76 240 aaPredicted RBP32.34■■■□□ 2.77
SRPK1-210ENST00000508473 U2AF1Q01081 240 aaKnown RBP eCLIP32.34■■■□□ 2.77
SRPK1-210ENST00000508473 NFATC2IPQ8NCF5 419 aa32.34■■■□□ 2.77
SRPK1-210ENST00000508473 MTFR1LQ9H019 292 aa32.34■■■□□ 2.77
SRPK1-210ENST00000508473 LGR6Q9HBX8 967 aa32.34■■■□□ 2.77
SRPK1-210ENST00000508473 PRKAR2BP31323 418 aa32.32■■■□□ 2.76
SRPK1-210ENST00000508473 ATP6V1AP38606 617 aa32.31■■■□□ 2.76
SRPK1-210ENST00000508473 RBM42Q9BTD8 480 aaKnown RBP32.31■■■□□ 2.76
SRPK1-210ENST00000508473 C5P01031 1676 aa32.31■■■□□ 2.76
SRPK1-210ENST00000508473 RNMTO43148 476 aaKnown RBP32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms