RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 HOXC9P31274 260 aa25.37■■□□□ 1.65
CLDND1-217ENST00000508071 MAP3K19Q56UN5 1328 aa25.37■■□□□ 1.65
CLDND1-217ENST00000508071 KCNQ4P56696 695 aa25.36■■□□□ 1.65
CLDND1-217ENST00000508071 ZCRB1Q8TBF4 217 aaKnown RBP25.36■■□□□ 1.65
CLDND1-217ENST00000508071 LY75O60449 1722 aa25.36■■□□□ 1.65
CLDND1-217ENST00000508071 RGPD2P0DJD1 1756 aa25.36■■□□□ 1.65
CLDND1-217ENST00000508071 GOLGB1Q14789 3259 aaKnown RBP25.35■■□□□ 1.65
CLDND1-217ENST00000508071 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
CLDND1-217ENST00000508071 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
CLDND1-217ENST00000508071 C1QTNF8P60827 252 aa25.34■■□□□ 1.65
CLDND1-217ENST00000508071 SHANK3Q9BYB0 1731 aa25.34■■□□□ 1.65
CLDND1-217ENST00000508071 NSD2O96028 1365 aa25.32■■□□□ 1.64
CLDND1-217ENST00000508071 CCNL1Q9UK58 526 aaPredicted RBP25.32■■□□□ 1.64
CLDND1-217ENST00000508071 FBLN1P23142 703 aa25.31■■□□□ 1.64
CLDND1-217ENST00000508071 MEGF6O75095 1541 aa25.31■■□□□ 1.64
CLDND1-217ENST00000508071 ST20-MTHFSA0A0A6YYL1 179 aa25.3■■□□□ 1.64
CLDND1-217ENST00000508071 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
CLDND1-217ENST00000508071 TESK2Q96S53 571 aa25.3■■□□□ 1.64
CLDND1-217ENST00000508071 MSH5O43196 834 aa25.29■■□□□ 1.64
CLDND1-217ENST00000508071 RTL1A6NKG5 1358 aa25.29■■□□□ 1.64
CLDND1-217ENST00000508071 USP47Q96K76 1375 aa25.29■■□□□ 1.64
CLDND1-217ENST00000508071 NLGN2Q8NFZ4 835 aa25.28■■□□□ 1.64
CLDND1-217ENST00000508071 RRS1Q15050 365 aaKnown RBP25.26■■□□□ 1.63
CLDND1-217ENST00000508071 NBPF6Q5VWK0 638 aa25.26■■□□□ 1.63
CLDND1-217ENST00000508071 NBPF4Q96M43 638 aa25.26■■□□□ 1.63
CLDND1-217ENST00000508071 CGNL1Q0VF96 1302 aa25.26■■□□□ 1.63
CLDND1-217ENST00000508071 GIGYF1O75420 1035 aaPredicted RBP25.25■■□□□ 1.63
CLDND1-217ENST00000508071 RAPGEF4Q8WZA2 1011 aa25.25■■□□□ 1.63
CLDND1-217ENST00000508071 SMG6Q86US8 1419 aaKnown RBP25.25■■□□□ 1.63
CLDND1-217ENST00000508071 USHBP1Q8N6Y0 703 aa25.24■■□□□ 1.63
CLDND1-217ENST00000508071 COL23A1Q86Y22 540 aaPredicted RBP25.23■■□□□ 1.63
CLDND1-217ENST00000508071 GRIN3BO60391 1043 aa25.22■■□□□ 1.63
CLDND1-217ENST00000508071 TATP17735 454 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-217ENST00000508071 HMGB2P26583 209 aaKnown RBP25.21■■□□□ 1.63
CLDND1-217ENST00000508071 GGNBP2Q9H3C7 697 aa25.21■■□□□ 1.63
CLDND1-217ENST00000508071 C5P01031 1676 aa25.2■■□□□ 1.63
CLDND1-217ENST00000508071 FYB1O15117 783 aa25.2■■□□□ 1.62
CLDND1-217ENST00000508071 MSL1Q68DK7 614 aa25.19■■□□□ 1.62
CLDND1-217ENST00000508071 PCDH11XQ9BZA7 1347 aa25.18■■□□□ 1.62
CLDND1-217ENST00000508071 PCDH11YQ9BZA8 1340 aa25.18■■□□□ 1.62
CLDND1-217ENST00000508071 YBX3P16989 372 aaKnown RBP eCLIP25.18■■□□□ 1.62
CLDND1-217ENST00000508071 TMF1P82094 1093 aa25.16■■□□□ 1.62
CLDND1-217ENST00000508071 FLAD1Q8NFF5 587 aa25.16■■□□□ 1.62
CLDND1-217ENST00000508071 TAF1LQ8IZX4 1826 aa25.15■■□□□ 1.62
CLDND1-217ENST00000508071 KIF20BQ96Q89 1820 aa25.15■■□□□ 1.62
CLDND1-217ENST00000508071 HSP90AB2PQ58FF8 381 aa25.15■■□□□ 1.62
CLDND1-217ENST00000508071 INSRP06213 1382 aa25.15■■□□□ 1.62
CLDND1-217ENST00000508071 PALLDQ8WX93 1383 aa25.15■■□□□ 1.62
CLDND1-217ENST00000508071 MPRIPQ6WCQ1 1025 aa25.14■■□□□ 1.62
CLDND1-217ENST00000508071 FLT4P35916 1363 aa25.14■■□□□ 1.61
CLDND1-217ENST00000508071 CD2APQ9Y5K6 639 aa25.13■■□□□ 1.61
CLDND1-217ENST00000508071 KIF24Q5T7B8 1368 aa25.12■■□□□ 1.61
CLDND1-217ENST00000508071 ITGB4P16144 1822 aa25.1■■□□□ 1.61
CLDND1-217ENST00000508071 SMARCC1Q92922 1105 aaPredicted RBP25.1■■□□□ 1.61
CLDND1-217ENST00000508071 CEP350Q5VT06 3117 aa25.1■■□□□ 1.61
CLDND1-217ENST00000508071 CYP27B1O15528 508 aa25.09■■□□□ 1.61
CLDND1-217ENST00000508071 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
CLDND1-217ENST00000508071 AK7Q96M32 723 aa25.09■■□□□ 1.61
CLDND1-217ENST00000508071 C4BP0C0L5 1744 aa25.09■■□□□ 1.61
CLDND1-217ENST00000508071 TOGARAM1Q9Y4F4 1720 aa25.08■■□□□ 1.61
CLDND1-217ENST00000508071 ATP10DQ9P241 1426 aa25.07■■□□□ 1.6
CLDND1-217ENST00000508071 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
CLDND1-217ENST00000508071 UBR3Q6ZT12 1888 aa25.04■■□□□ 1.6
CLDND1-217ENST00000508071 EMILIN1Q9Y6C2 1016 aa25.04■■□□□ 1.6
CLDND1-217ENST00000508071 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
CLDND1-217ENST00000508071 PHF14O94880 888 aa25.03■■□□□ 1.6
CLDND1-217ENST00000508071 PIGBQ92521 554 aa25.03■■□□□ 1.6
CLDND1-217ENST00000508071 GPBP1L1Q9HC44 474 aaPredicted RBP25.02■■□□□ 1.6
CLDND1-217ENST00000508071 SPG7Q9UQ90 795 aa25.02■■□□□ 1.6
CLDND1-217ENST00000508071 PPM1GO15355 546 aaPredicted RBP25.01■■□□□ 1.59
CLDND1-217ENST00000508071 AMIGO3Q86WK7 504 aa25.01■■□□□ 1.59
CLDND1-217ENST00000508071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25■■□□□ 1.59
CLDND1-217ENST00000508071 NKX1-1Q15270 411 aaPredicted RBP25■■□□□ 1.59
CLDND1-217ENST00000508071 NCAPD2Q15021 1401 aa24.99■■□□□ 1.59
CLDND1-217ENST00000508071 CARD14Q9BXL6 1004 aa24.99■■□□□ 1.59
CLDND1-217ENST00000508071 IGSF1Q8N6C5 1336 aa24.98■■□□□ 1.59
CLDND1-217ENST00000508071 LOC102724428A0A0B4J2F2 783 aa24.98■■□□□ 1.59
CLDND1-217ENST00000508071 SSFA2P28290 1259 aa24.98■■□□□ 1.59
CLDND1-217ENST00000508071 SIK1P57059 783 aa24.98■■□□□ 1.59
CLDND1-217ENST00000508071 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
CLDND1-217ENST00000508071 MAP2P11137 1827 aaKnown RBP24.98■■□□□ 1.59
CLDND1-217ENST00000508071 TMOD3Q9NYL9 352 aa24.97■■□□□ 1.59
CLDND1-217ENST00000508071 ADCY9O60503 1353 aa24.96■■□□□ 1.59
CLDND1-217ENST00000508071 ANKRD26Q9UPS8 1709 aa24.96■■□□□ 1.59
CLDND1-217ENST00000508071 LINC00116Q8NCU8 138 aa24.96■■□□□ 1.59
CLDND1-217ENST00000508071 ZNF526Q8TF50 670 aaPredicted RBP24.96■■□□□ 1.59
CLDND1-217ENST00000508071 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.58
CLDND1-217ENST00000508071 WWC3Q9ULE0 1092 aa24.95■■□□□ 1.58
CLDND1-217ENST00000508071 EYA1Q99502 592 aa24.94■■□□□ 1.58
CLDND1-217ENST00000508071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.58
CLDND1-217ENST00000508071 GNPATO15228 680 aa24.93■■□□□ 1.58
CLDND1-217ENST00000508071 IFNL2Q8IZJ0 200 aa24.92■■□□□ 1.58
CLDND1-217ENST00000508071 ASAP1Q9ULH1 1129 aa24.92■■□□□ 1.58
CLDND1-217ENST00000508071 ATP6V1AP38606 617 aa24.91■■□□□ 1.58
CLDND1-217ENST00000508071 IFFO2Q5TF58 517 aa24.91■■□□□ 1.58
CLDND1-217ENST00000508071 PHKG2P15735 406 aa24.9■■□□□ 1.58
CLDND1-217ENST00000508071 ITPK1Q13572 414 aa24.9■■□□□ 1.58
CLDND1-217ENST00000508071 HSPA6P17066 643 aa24.88■■□□□ 1.57
CLDND1-217ENST00000508071 ATG3Q9NT62 314 aa24.87■■□□□ 1.57
CLDND1-217ENST00000508071 POLKQ9UBT6 870 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms