RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 KRT28Q7Z3Y7 464 aa28.27■■■□□ 2.12
RNF4-207ENST00000506706 KIAA0232Q92628 1395 aa28.26■■■□□ 2.11
RNF4-207ENST00000506706 SLIT3O75094 1523 aa28.26■■■□□ 2.11
RNF4-207ENST00000506706 DCCP43146 1447 aa28.25■■■□□ 2.11
RNF4-207ENST00000506706 ANP32AP39687 249 aaKnown RBP28.24■■■□□ 2.11
RNF4-207ENST00000506706 GCP02774 474 aa28.23■■■□□ 2.11
RNF4-207ENST00000506706 HSPA2P54652 639 aa28.23■■■□□ 2.11
RNF4-207ENST00000506706 MSH5O43196 834 aa28.23■■■□□ 2.11
RNF4-207ENST00000506706 LMOD2Q6P5Q4 547 aa28.22■■■□□ 2.11
RNF4-207ENST00000506706 MST1RQ04912 1400 aa28.22■■■□□ 2.11
RNF4-207ENST00000506706 ZBTB40Q9NUA8 1239 aa28.22■■■□□ 2.11
RNF4-207ENST00000506706 ZBTB7CA1YPR0 619 aa28.21■■■□□ 2.11
RNF4-207ENST00000506706 GNAT3A8MTJ3 354 aa28.21■■■□□ 2.11
RNF4-207ENST00000506706 USP19O94966 1318 aa28.2■■■□□ 2.11
RNF4-207ENST00000506706 ARHGEF25Q86VW2 580 aa28.2■■■□□ 2.1
RNF4-207ENST00000506706 CHMP4BQ9H444 224 aaKnown RBP28.2■■■□□ 2.1
RNF4-207ENST00000506706 FAM161AQ3B820 660 aa28.19■■■□□ 2.1
RNF4-207ENST00000506706 API5Q9BZZ5 524 aaKnown RBP28.19■■■□□ 2.1
RNF4-207ENST00000506706 HDAC1Q13547 482 aaPredicted RBP28.19■■■□□ 2.1
RNF4-207ENST00000506706 USHBP1Q8N6Y0 703 aa28.19■■■□□ 2.1
RNF4-207ENST00000506706 TSPYL4Q9UJ04 414 aa28.19■■■□□ 2.1
RNF4-207ENST00000506706 LRRC37A3O60309 1634 aa28.18■■■□□ 2.1
RNF4-207ENST00000506706 ABCC4O15439 1325 aa28.18■■■□□ 2.1
RNF4-207ENST00000506706 KRT24Q2M2I5 525 aa28.18■■■□□ 2.1
RNF4-207ENST00000506706 MAP3K5Q99683 1374 aa28.18■■■□□ 2.1
RNF4-207ENST00000506706 NBPF6Q5VWK0 638 aa28.17■■■□□ 2.1
RNF4-207ENST00000506706 NBPF4Q96M43 638 aa28.17■■■□□ 2.1
RNF4-207ENST00000506706 CADPS2Q86UW7 1296 aa28.16■■■□□ 2.1
RNF4-207ENST00000506706 MIS18AQ9NYP9 233 aa28.15■■■□□ 2.1
RNF4-207ENST00000506706 MSH6P52701 1360 aa28.15■■■□□ 2.1
RNF4-207ENST00000506706 ALS2Q96Q42 1657 aa28.15■■■□□ 2.1
RNF4-207ENST00000506706 PDZRN3Q9UPQ7 1066 aa28.14■■■□□ 2.1
RNF4-207ENST00000506706 PLEKHG5O94827 1062 aa28.13■■■□□ 2.09
RNF4-207ENST00000506706 ZBTB7BO15156 539 aaPredicted RBP28.12■■■□□ 2.09
RNF4-207ENST00000506706 C8orf34Q49A92 452 aa28.12■■■□□ 2.09
RNF4-207ENST00000506706 RGPD2P0DJD1 1756 aa28.12■■■□□ 2.09
RNF4-207ENST00000506706 KDM4FA0A1W2PPD8 638 aa28.11■■■□□ 2.09
RNF4-207ENST00000506706 IL17REQ8NFR9 667 aa28.11■■■□□ 2.09
RNF4-207ENST00000506706 NPM2Q86SE8 214 aaKnown RBP28.1■■■□□ 2.09
RNF4-207ENST00000506706 IPO9Q96P70 1041 aaKnown RBP28.1■■■□□ 2.09
RNF4-207ENST00000506706 BABAM1Q9NWV8 329 aa28.1■■■□□ 2.09
RNF4-207ENST00000506706 LMTK3Q96Q04 1460 aa28.1■■■□□ 2.09
RNF4-207ENST00000506706 LRRC59Q96AG4 307 aaKnown RBP28.09■■■□□ 2.09
RNF4-207ENST00000506706 ANKRD24Q8TF21 1146 aa28.08■■■□□ 2.09
RNF4-207ENST00000506706 PTPRCP08575 1304 aa28.07■■■□□ 2.08
RNF4-207ENST00000506706 NPHP3Q7Z494 1330 aa28.07■■■□□ 2.08
RNF4-207ENST00000506706 TAF7Q15545 349 aaPredicted RBP28.07■■■□□ 2.08
RNF4-207ENST00000506706 NCAPD2Q15021 1401 aa28.07■■■□□ 2.08
RNF4-207ENST00000506706 MED1Q15648 1581 aaPredicted RBP28.06■■■□□ 2.08
RNF4-207ENST00000506706 STRCQ7RTU9 1775 aa28.06■■■□□ 2.08
RNF4-207ENST00000506706 SMC5Q8IY18 1101 aa28.06■■■□□ 2.08
RNF4-207ENST00000506706 ERICH6Q7L0X2 663 aa28.04■■■□□ 2.08
RNF4-207ENST00000506706 DDX17Q92841 729 aaKnown RBP28.04■■■□□ 2.08
RNF4-207ENST00000506706 XIRP1Q702N8 1843 aaKnown RBP28.04■■■□□ 2.08
RNF4-207ENST00000506706 SLC4A2P04920 1241 aa28.04■■■□□ 2.08
RNF4-207ENST00000506706 PLEKHO1Q53GL0 409 aaPredicted RBP28.04■■■□□ 2.08
RNF4-207ENST00000506706 INTS3Q68E01 1043 aaKnown RBP28.03■■■□□ 2.08
RNF4-207ENST00000506706 RGS12O14924 1447 aa28.03■■■□□ 2.08
RNF4-207ENST00000506706 SOS1Q07889 1333 aaPredicted RBP28.03■■■□□ 2.08
RNF4-207ENST00000506706 CAMTA1Q9Y6Y1 1673 aa28.03■■■□□ 2.08
RNF4-207ENST00000506706 AMOTQ4VCS5 1084 aa28.03■■■□□ 2.08
RNF4-207ENST00000506706 AXIN2Q9Y2T1 843 aa28.03■■■□□ 2.08
RNF4-207ENST00000506706 VIRMAQ69YN4 1812 aaKnown RBP28.02■■■□□ 2.08
RNF4-207ENST00000506706 CEMIPQ8WUJ3 1361 aa28.02■■■□□ 2.08
RNF4-207ENST00000506706 ZC3H6P61129 1189 aaKnown RBP28.01■■■□□ 2.07
RNF4-207ENST00000506706 TNS3Q68CZ2 1445 aa28.01■■■□□ 2.07
RNF4-207ENST00000506706 LMO7Q8WWI1 1683 aa28■■■□□ 2.07
RNF4-207ENST00000506706 AKAP4Q5JQC9 854 aa28■■■□□ 2.07
RNF4-207ENST00000506706 NOP58Q9Y2X3 529 aaKnown RBP28■■■□□ 2.07
RNF4-207ENST00000506706 RGPD5Q99666 1765 aa28■■■□□ 2.07
RNF4-207ENST00000506706 ZNF530Q6P9A1 599 aaPredicted RBP27.99■■■□□ 2.07
RNF4-207ENST00000506706 ANP32EQ9BTT0 268 aa27.98■■■□□ 2.07
RNF4-207ENST00000506706 STK31Q9BXU1 1019 aa27.98■■■□□ 2.07
RNF4-207ENST00000506706 C1orf115Q9H7X2 142 aa27.98■■■□□ 2.07
RNF4-207ENST00000506706 PXDNQ92626 1479 aa27.98■■■□□ 2.07
RNF4-207ENST00000506706 CCDC30Q5VVM6 783 aa27.98■■■□□ 2.07
RNF4-207ENST00000506706 ERBB3P21860 1342 aa27.97■■■□□ 2.07
RNF4-207ENST00000506706 ZBTB47Q9UFB7 747 aaPredicted RBP27.96■■■□□ 2.07
RNF4-207ENST00000506706 LGR6Q9HBX8 967 aa27.95■■■□□ 2.07
RNF4-207ENST00000506706 SPATA31A3Q5VYP0 1347 aa27.95■■■□□ 2.06
RNF4-207ENST00000506706 GCC1Q96CN9 775 aa27.95■■■□□ 2.06
RNF4-207ENST00000506706 FAM208AQ9UK61 1670 aaKnown RBP27.94■■■□□ 2.06
RNF4-207ENST00000506706 NUCB1Q02818 461 aa27.94■■■□□ 2.06
RNF4-207ENST00000506706 C1orf141Q5JVX7 400 aa27.94■■■□□ 2.06
RNF4-207ENST00000506706 G2E3Q7L622 706 aa27.93■■■□□ 2.06
RNF4-207ENST00000506706 BRINP3Q76B58 766 aa27.92■■■□□ 2.06
RNF4-207ENST00000506706 TEFQ10587 303 aa27.91■■■□□ 2.06
RNF4-207ENST00000506706 CACNA1FO60840 1977 aa27.91■■■□□ 2.06
RNF4-207ENST00000506706 SIRT2Q8IXJ6 389 aa27.91■■■□□ 2.06
RNF4-207ENST00000506706 ZNF335Q9H4Z2 1342 aaPredicted RBP27.91■■■□□ 2.06
RNF4-207ENST00000506706 COL18A1P39060 1754 aa27.91■■■□□ 2.06
RNF4-207ENST00000506706 KDM3BQ7LBC6 1761 aa27.9■■■□□ 2.06
RNF4-207ENST00000506706 CABLES1Q8TDN4 633 aa27.9■■■□□ 2.06
RNF4-207ENST00000506706 DDRGK1Q96HY6 314 aa27.9■■■□□ 2.06
RNF4-207ENST00000506706 OVOS2A0A0G2JMS6 1433 aa27.9■■■□□ 2.06
RNF4-207ENST00000506706 MPRIPQ6WCQ1 1025 aa27.9■■■□□ 2.06
RNF4-207ENST00000506706 ABCC6O95255 1503 aa27.9■■■□□ 2.06
RNF4-207ENST00000506706 CRYBG1Q9Y4K1 1723 aa27.89■■■□□ 2.06
RNF4-207ENST00000506706 CHD1LQ86WJ1 897 aa27.89■■■□□ 2.06
RNF4-207ENST00000506706 RNMTO43148 476 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms