RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 PLSCR1O15162 318 aa30.82■■■□□ 2.52
HMGB2-204ENST00000506267 ZCRB1Q8TBF4 217 aaKnown RBP30.81■■■□□ 2.52
HMGB2-204ENST00000506267 DDX54Q8TDD1 881 aaKnown RBP30.81■■■□□ 2.52
HMGB2-204ENST00000506267 NUP188Q5SRE5 1749 aa30.81■■■□□ 2.52
HMGB2-204ENST00000506267 SRCAPQ6ZRS2 3230 aa30.81■■■□□ 2.52
HMGB2-204ENST00000506267 EYA1Q99502 592 aa30.8■■■□□ 2.52
HMGB2-204ENST00000506267 EIF4A2Q14240 407 aaKnown RBP30.79■■■□□ 2.52
HMGB2-204ENST00000506267 RAPGEF4Q8WZA2 1011 aa30.79■■■□□ 2.52
HMGB2-204ENST00000506267 ACSBG1Q96GR2 724 aa30.79■■■□□ 2.52
HMGB2-204ENST00000506267 KAT6BQ8WYB5 2073 aa30.78■■■□□ 2.52
HMGB2-204ENST00000506267 TATP17735 454 aaPredicted RBP30.77■■■□□ 2.52
HMGB2-204ENST00000506267 PROM2Q8N271 834 aa30.75■■■□□ 2.51
HMGB2-204ENST00000506267 NPC1L1Q9UHC9 1359 aa30.74■■■□□ 2.51
HMGB2-204ENST00000506267 PSDA5PKW4 1024 aaPredicted RBP30.73■■■□□ 2.51
HMGB2-204ENST00000506267 BTAF1O14981 1849 aa30.73■■■□□ 2.51
HMGB2-204ENST00000506267 PKD1L3Q7Z443 1732 aa30.72■■■□□ 2.51
HMGB2-204ENST00000506267 CC2D1BQ5T0F9 858 aaKnown RBP30.71■■■□□ 2.51
HMGB2-204ENST00000506267 IGSF1Q8N6C5 1336 aa30.7■■■□□ 2.5
HMGB2-204ENST00000506267 R3HDM1Q15032 1099 aaKnown RBP30.69■■■□□ 2.5
HMGB2-204ENST00000506267 DOT1LQ8TEK3 1739 aa30.69■■■□□ 2.5
HMGB2-204ENST00000506267 CYP27B1O15528 508 aa30.67■■■□□ 2.5
HMGB2-204ENST00000506267 PCDH11XQ9BZA7 1347 aa30.67■■■□□ 2.5
HMGB2-204ENST00000506267 PCDH11YQ9BZA8 1340 aa30.67■■■□□ 2.5
HMGB2-204ENST00000506267 PRIM1P49642 420 aaKnown RBP30.65■■■□□ 2.5
HMGB2-204ENST00000506267 TXNRD1Q16881 649 aa30.65■■■□□ 2.5
HMGB2-204ENST00000506267 MTHFSP49914 203 aa30.64■■■□□ 2.5
HMGB2-204ENST00000506267 IL13P35225 146 aa30.63■■■□□ 2.49
HMGB2-204ENST00000506267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.63■■■□□ 2.493e-9■■□□□ 12
HMGB2-204ENST00000506267 NBPF14Q5TI25 921 aa30.62■■■□□ 2.49
HMGB2-204ENST00000506267 ANO8Q9HCE9 1232 aaPredicted RBP30.61■■■□□ 2.49
HMGB2-204ENST00000506267 PLEKHG2Q9H7P9 1386 aa30.61■■■□□ 2.49
HMGB2-204ENST00000506267 SPG7Q9UQ90 795 aa30.6■■■□□ 2.49
HMGB2-204ENST00000506267 NKX1-1Q15270 411 aaPredicted RBP30.59■■■□□ 2.49
HMGB2-204ENST00000506267 TOGARAM1Q9Y4F4 1720 aa30.59■■■□□ 2.49
HMGB2-204ENST00000506267 SYTL4Q96C24 671 aaPredicted RBP30.58■■■□□ 2.49
HMGB2-204ENST00000506267 AEBP1Q8IUX7 1158 aa30.57■■■□□ 2.48
HMGB2-204ENST00000506267 CNGB1Q14028 1251 aaPredicted RBP30.56■■■□□ 2.48
HMGB2-204ENST00000506267 KDRP35968 1356 aa30.55■■■□□ 2.48
HMGB2-204ENST00000506267 LRP5O75197 1615 aa30.55■■■□□ 2.48
HMGB2-204ENST00000506267 PAPPAQ13219 1627 aa30.55■■■□□ 2.48
HMGB2-204ENST00000506267 LRRC4BQ9NT99 713 aa30.54■■■□□ 2.48
HMGB2-204ENST00000506267 ITGB4P16144 1822 aa30.54■■■□□ 2.48
HMGB2-204ENST00000506267 LY75O60449 1722 aa30.53■■■□□ 2.48
HMGB2-204ENST00000506267 PHKG2P15735 406 aa30.53■■■□□ 2.48
HMGB2-204ENST00000506267 COL3A1P02461 1466 aaPredicted RBP30.52■■■□□ 2.48
HMGB2-204ENST00000506267 SULT6B1Q6IMI4 303 aa30.52■■■□□ 2.48
HMGB2-204ENST00000506267 IFNL2Q8IZJ0 200 aa30.51■■■□□ 2.47
HMGB2-204ENST00000506267 SLC27A3Q5K4L6 730 aa30.48■■■□□ 2.47
HMGB2-204ENST00000506267 DIAPH1O60610 1272 aaKnown RBP30.47■■■□□ 2.47
HMGB2-204ENST00000506267 SLC15A2Q16348 729 aa30.47■■■□□ 2.47
HMGB2-204ENST00000506267 PLEKHO1Q53GL0 409 aaPredicted RBP30.47■■■□□ 2.47
HMGB2-204ENST00000506267 CASZ1Q86V15 1759 aa30.46■■■□□ 2.47
HMGB2-204ENST00000506267 MPRIPQ6WCQ1 1025 aa30.46■■■□□ 2.47
HMGB2-204ENST00000506267 STK32BQ9NY57 414 aa30.46■■■□□ 2.47
HMGB2-204ENST00000506267 AMOTQ4VCS5 1084 aa30.45■■■□□ 2.47
HMGB2-204ENST00000506267 KCNQ4P56696 695 aa30.44■■■□□ 2.46
HMGB2-204ENST00000506267 PIGBQ92521 554 aa30.44■■■□□ 2.46
HMGB2-204ENST00000506267 PDGFDQ9GZP0 370 aaPredicted RBP30.44■■■□□ 2.46
HMGB2-204ENST00000506267 PPP2R1AP30153 589 aa30.42■■■□□ 2.46
HMGB2-204ENST00000506267 ZNF827Q17R98 1081 aa30.42■■■□□ 2.46
HMGB2-204ENST00000506267 HMOX1P09601 288 aa30.41■■■□□ 2.46
HMGB2-204ENST00000506267 ZNF530Q6P9A1 599 aaPredicted RBP30.41■■■□□ 2.46
HMGB2-204ENST00000506267 AKT1S1Q96B36 256 aa30.41■■■□□ 2.46
HMGB2-204ENST00000506267 PALLDQ8WX93 1383 aa30.39■■■□□ 2.45
HMGB2-204ENST00000506267 KDM6AO15550 1401 aaPredicted RBP30.39■■■□□ 2.45
HMGB2-204ENST00000506267 CCNL1Q9UK58 526 aaPredicted RBP30.38■■■□□ 2.45
HMGB2-204ENST00000506267 DCAF5Q96JK2 942 aa30.37■■■□□ 2.45
HMGB2-204ENST00000506267 HSP90AB1P08238 724 aaKnown RBP30.36■■■□□ 2.45
HMGB2-204ENST00000506267 TMOD3Q9NYL9 352 aa30.36■■■□□ 2.45
HMGB2-204ENST00000506267 ERVV-2B6SEH9 535 aa30.35■■■□□ 2.45
HMGB2-204ENST00000506267 SMARCC1Q92922 1105 aaPredicted RBP30.35■■■□□ 2.45
HMGB2-204ENST00000506267 QSER1Q2KHR3 1735 aa30.34■■■□□ 2.45
HMGB2-204ENST00000506267 TAF1LQ8IZX4 1826 aa30.33■■■□□ 2.45
HMGB2-204ENST00000506267 ASAP1Q9ULH1 1129 aa30.33■■■□□ 2.45
HMGB2-204ENST00000506267 TUBGCP6Q96RT7 1819 aa30.33■■■□□ 2.45
HMGB2-204ENST00000506267 C1orf141Q5JVX7 400 aa30.32■■■□□ 2.44
HMGB2-204ENST00000506267 SPON1Q9HCB6 807 aa30.32■■■□□ 2.44
HMGB2-204ENST00000506267 C5P01031 1676 aa30.31■■■□□ 2.44
HMGB2-204ENST00000506267 U2SURPO15042 1029 aaKnown RBP30.31■■■□□ 2.44
HMGB2-204ENST00000506267 ZEB1P37275 1124 aaPredicted RBP30.31■■■□□ 2.44
HMGB2-204ENST00000506267 CFAP53Q96M91 514 aa30.31■■■□□ 2.44
HMGB2-204ENST00000506267 DDX10Q13206 875 aaKnown RBP30.3■■■□□ 2.44
HMGB2-204ENST00000506267 ATG3Q9NT62 314 aa30.3■■■□□ 2.44
HMGB2-204ENST00000506267 SCN11AQ9UI33 1791 aa30.3■■■□□ 2.44
HMGB2-204ENST00000506267 MTHFSDQ2M296 383 aaKnown RBP30.29■■■□□ 2.44
HMGB2-204ENST00000506267 AKAP4Q5JQC9 854 aa30.29■■■□□ 2.44
HMGB2-204ENST00000506267 ZBTB7AO95365 584 aa30.28■■■□□ 2.44
HMGB2-204ENST00000506267 PNPLA7Q6ZV29 1317 aa30.27■■■□□ 2.44
HMGB2-204ENST00000506267 LOC102724428A0A0B4J2F2 783 aa30.25■■■□□ 2.43
HMGB2-204ENST00000506267 SIK1P57059 783 aa30.25■■■□□ 2.43
HMGB2-204ENST00000506267 VIRMAQ69YN4 1812 aaKnown RBP30.24■■■□□ 2.43
HMGB2-204ENST00000506267 ADAMTS7Q9UKP4 1686 aa30.24■■■□□ 2.43
HMGB2-204ENST00000506267 PTGER2P43116 358 aa30.24■■■□□ 2.43
HMGB2-204ENST00000506267 CABP4P57796 275 aa30.24■■■□□ 2.43
HMGB2-204ENST00000506267 TFCP2L1Q9NZI6 479 aa30.24■■■□□ 2.43
HMGB2-204ENST00000506267 MTFR1LQ9H019 292 aa30.23■■■□□ 2.43
HMGB2-204ENST00000506267 RSPH6AQ9H0K4 717 aa30.23■■■□□ 2.43
HMGB2-204ENST00000506267 LGR6Q9HBX8 967 aa30.23■■■□□ 2.43
HMGB2-204ENST00000506267 ATF5Q9Y2D1 282 aaPredicted RBP30.23■■■□□ 2.43
HMGB2-204ENST00000506267 C4BP0C0L5 1744 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms