RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
GYPB-205ENST00000505583 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
GYPB-205ENST00000505583 DOT1LQ8TEK3 1739 aa8.32□□□□□ -1.08
GYPB-205ENST00000505583 CAPN15O75808 1086 aa8.31□□□□□ -1.08
GYPB-205ENST00000505583 HDGFL2Q7Z4V5 671 aaPredicted RBP8.31□□□□□ -1.08
GYPB-205ENST00000505583 LTV1Q96GA3 475 aaPredicted RBP8.31□□□□□ -1.08
GYPB-205ENST00000505583 FHDC1Q9C0D6 1143 aaPredicted RBP8.31□□□□□ -1.08
GYPB-205ENST00000505583 LY75O60449 1722 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 QSER1Q2KHR3 1735 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 KCNQ4P56696 695 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 IP6K1Q92551 441 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 SYT17Q9BSW7 474 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 MTFR1LQ9H019 292 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 TERF2IPQ9NYB0 399 aa8.3□□□□□ -1.08
GYPB-205ENST00000505583 MAP3K19Q56UN5 1328 aa8.29□□□□□ -1.08
GYPB-205ENST00000505583 MEGF6O75095 1541 aa8.29□□□□□ -1.08
GYPB-205ENST00000505583 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
GYPB-205ENST00000505583 DDX54Q8TDD1 881 aaKnown RBP8.29□□□□□ -1.08
GYPB-205ENST00000505583 NSD2O96028 1365 aa8.29□□□□□ -1.08
GYPB-205ENST00000505583 TONSLQ96HA7 1378 aa8.29□□□□□ -1.08
GYPB-205ENST00000505583 HOXC9P31274 260 aa8.28□□□□□ -1.08
GYPB-205ENST00000505583 AKT1S1Q96B36 256 aa8.28□□□□□ -1.08
GYPB-205ENST00000505583 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
GYPB-205ENST00000505583 CHD4Q14839 1912 aa8.28□□□□□ -1.08
GYPB-205ENST00000505583 UTRNP46939 3433 aa8.28□□□□□ -1.08
GYPB-205ENST00000505583 PRIM1P49642 420 aaKnown RBP8.27□□□□□ -1.09
GYPB-205ENST00000505583 RRS1Q15050 365 aaKnown RBP8.27□□□□□ -1.09
GYPB-205ENST00000505583 ARXQ96QS3 562 aa8.27□□□□□ -1.09
GYPB-205ENST00000505583 PNPLA7Q6ZV29 1317 aa8.27□□□□□ -1.09
GYPB-205ENST00000505583 KIF20BQ96Q89 1820 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 ANKRD36BQ8N2N9 1353 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 MKRN4PQ13434 485 aaPredicted RBP8.26□□□□□ -1.09
GYPB-205ENST00000505583 POLA2Q14181 598 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
GYPB-205ENST00000505583 SYTL4Q96C24 671 aaPredicted RBP8.26□□□□□ -1.09
GYPB-205ENST00000505583 COG3Q96JB2 828 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
GYPB-205ENST00000505583 FYB1O15117 783 aa8.25□□□□□ -1.09
GYPB-205ENST00000505583 AMPHP49418 695 aa8.25□□□□□ -1.09
GYPB-205ENST00000505583 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
GYPB-205ENST00000505583 TOGARAM1Q9Y4F4 1720 aa8.25□□□□□ -1.09
GYPB-205ENST00000505583 C5P01031 1676 aa8.24□□□□□ -1.09
GYPB-205ENST00000505583 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
GYPB-205ENST00000505583 SLC27A3Q5K4L6 730 aa8.24□□□□□ -1.09
GYPB-205ENST00000505583 ZCRB1Q8TBF4 217 aaKnown RBP8.24□□□□□ -1.09
GYPB-205ENST00000505583 ITGB4P16144 1822 aa8.24□□□□□ -1.09
GYPB-205ENST00000505583 TAF1LQ8IZX4 1826 aa8.24□□□□□ -1.09
GYPB-205ENST00000505583 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
GYPB-205ENST00000505583 KLHL34Q8N239 644 aa8.23□□□□□ -1.09
GYPB-205ENST00000505583 NLGN2Q8NFZ4 835 aa8.23□□□□□ -1.09
GYPB-205ENST00000505583 TFCP2L1Q9NZI6 479 aa8.23□□□□□ -1.09
GYPB-205ENST00000505583 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
GYPB-205ENST00000505583 USP47Q96K76 1375 aa8.22□□□□□ -1.09
GYPB-205ENST00000505583 COL23A1Q86Y22 540 aaPredicted RBP8.22□□□□□ -1.09
GYPB-205ENST00000505583 SLC16A10Q8TF71 515 aa8.22□□□□□ -1.09
GYPB-205ENST00000505583 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
GYPB-205ENST00000505583 CCNL1Q9UK58 526 aaPredicted RBP8.22□□□□□ -1.09
GYPB-205ENST00000505583 PKD1L3Q7Z443 1732 aa8.22□□□□□ -1.09
GYPB-205ENST00000505583 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
GYPB-205ENST00000505583 ABCB7O75027 752 aa8.21□□□□□ -1.1
GYPB-205ENST00000505583 INSRP06213 1382 aa8.21□□□□□ -1.1
GYPB-205ENST00000505583 MAP2P11137 1827 aaKnown RBP8.2□□□□□ -1.1
GYPB-205ENST00000505583 CYP27B1O15528 508 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.16e-7■■■□□ 14.8
GYPB-205ENST00000505583 TMF1P82094 1093 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 GPR162Q16538 588 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 SMIM5Q71RC9 77 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 C4BP0C0L5 1744 aa8.2□□□□□ -1.1
GYPB-205ENST00000505583 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 POLD1P28340 1107 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
GYPB-205ENST00000505583 RAPGEF4Q8WZA2 1011 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 CGNL1Q0VF96 1302 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 FLT4P35916 1363 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 SMG6Q86US8 1419 aaKnown RBP8.19□□□□□ -1.1
GYPB-205ENST00000505583 NSD3Q9BZ95 1437 aa8.19□□□□□ -1.1
GYPB-205ENST00000505583 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
GYPB-205ENST00000505583 GOLGB1Q14789 3259 aaKnown RBP8.18□□□□□ -1.1
GYPB-205ENST00000505583 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
GYPB-205ENST00000505583 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
GYPB-205ENST00000505583 PALLDQ8WX93 1383 aa8.18□□□□□ -1.1
GYPB-205ENST00000505583 NCAPD2Q15021 1401 aa8.18□□□□□ -1.1
GYPB-205ENST00000505583 SPDYE4A6NLX3 237 aa8.17□□□□□ -1.1
GYPB-205ENST00000505583 C1QTNF8P60827 252 aa8.17□□□□□ -1.1
GYPB-205ENST00000505583 KIF24Q5T7B8 1368 aa8.17□□□□□ -1.1
GYPB-205ENST00000505583 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
GYPB-205ENST00000505583 PIGBQ92521 554 aa8.16□□□□□ -1.1
GYPB-205ENST00000505583 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
GYPB-205ENST00000505583 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.1
GYPB-205ENST00000505583 EYA1Q99502 592 aa8.15□□□□□ -1.1
GYPB-205ENST00000505583 WASHC2AQ641Q2 1341 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 PHF14O94880 888 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms