RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 AMPHP49418 695 aa31.77■■■□□ 2.68
DHFR-203ENST00000505337 FAM83GA6ND36 823 aa31.75■■■□□ 2.67
DHFR-203ENST00000505337 IFT57Q9NWB7 429 aa31.75■■■□□ 2.67
DHFR-203ENST00000505337 RBM19Q9Y4C8 960 aaKnown RBP31.75■■■□□ 2.67
DHFR-203ENST00000505337 ATRNO75882 1429 aa31.75■■■□□ 2.67
DHFR-203ENST00000505337 ZNF853P0CG23 659 aa31.75■■■□□ 2.67
DHFR-203ENST00000505337 HOXC9P31274 260 aa31.75■■■□□ 2.67
DHFR-203ENST00000505337 BCL2L13Q9BXK5 485 aa31.75■■■□□ 2.67
DHFR-203ENST00000505337 TRPC5Q9UL62 973 aaPredicted RBP31.75■■■□□ 2.67
DHFR-203ENST00000505337 THUMPD2Q9BTF0 503 aaKnown RBP31.74■■■□□ 2.67
DHFR-203ENST00000505337 LRRC37A3O60309 1634 aa31.73■■■□□ 2.67
DHFR-203ENST00000505337 RBM6P78332 1123 aaKnown RBP31.73■■■□□ 2.67
DHFR-203ENST00000505337 FRAT1Q92837 279 aaPredicted RBP31.73■■■□□ 2.67
DHFR-203ENST00000505337 UNC5CLQ8IV45 518 aa31.72■■■□□ 2.67
DHFR-203ENST00000505337 PANK1Q8TE04 598 aa31.72■■■□□ 2.67
DHFR-203ENST00000505337 GNAI1P63096 354 aa31.71■■■□□ 2.67
DHFR-203ENST00000505337 RGPD2P0DJD1 1756 aa31.71■■■□□ 2.67
DHFR-203ENST00000505337 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.7■■■□□ 2.66
DHFR-203ENST00000505337 USP19O94966 1318 aa31.69■■■□□ 2.66
DHFR-203ENST00000505337 PLCH1Q4KWH8 1693 aa31.69■■■□□ 2.66
DHFR-203ENST00000505337 EYA1Q99502 592 aa31.69■■■□□ 2.66
DHFR-203ENST00000505337 SSH1Q8WYL5 1049 aa31.68■■■□□ 2.66
DHFR-203ENST00000505337 SMC4Q9NTJ3 1288 aa31.67■■■□□ 2.66
DHFR-203ENST00000505337 RLBP1P12271 317 aa31.66■■■□□ 2.66
DHFR-203ENST00000505337 CENPQQ7L2Z9 268 aaPredicted RBP31.66■■■□□ 2.66
DHFR-203ENST00000505337 ZNF428Q96B54 188 aa31.66■■■□□ 2.66
DHFR-203ENST00000505337 CFAP44Q96MT7 982 aa31.66■■■□□ 2.66
DHFR-203ENST00000505337 TNNQ9UQP3 1299 aa31.66■■■□□ 2.66
DHFR-203ENST00000505337 COG6Q9Y2V7 657 aa31.66■■■□□ 2.66
DHFR-203ENST00000505337 NWD2Q9ULI1 1742 aa31.66■■■□□ 2.66
DHFR-203ENST00000505337 ALDH1L2Q3SY69 923 aa31.65■■■□□ 2.66
DHFR-203ENST00000505337 ZKSCAN2Q63HK3 967 aa31.65■■■□□ 2.66
DHFR-203ENST00000505337 MBIPQ9NS73 344 aa31.65■■■□□ 2.66
DHFR-203ENST00000505337 KIAA0232Q92628 1395 aa31.64■■■□□ 2.66
DHFR-203ENST00000505337 COL14A1Q05707 1796 aaKnown RBP31.64■■■□□ 2.66
DHFR-203ENST00000505337 LAS1LQ9Y4W2 734 aaKnown RBP31.64■■■□□ 2.66
DHFR-203ENST00000505337 CAMTA1Q9Y6Y1 1673 aa31.64■■■□□ 2.66
DHFR-203ENST00000505337 RGS12O14924 1447 aa31.64■■■□□ 2.66
DHFR-203ENST00000505337 KCNH5Q8NCM2 988 aa31.63■■■□□ 2.65
DHFR-203ENST00000505337 ZC3H6P61129 1189 aaKnown RBP31.63■■■□□ 2.65
DHFR-203ENST00000505337 AAMPQ13685 434 aa31.63■■■□□ 2.65
DHFR-203ENST00000505337 BTG4Q9NY30 223 aa31.63■■■□□ 2.65
DHFR-203ENST00000505337 CLUAP1Q96AJ1 413 aa31.62■■■□□ 2.65
DHFR-203ENST00000505337 GJD4Q96KN9 370 aaPredicted RBP31.62■■■□□ 2.65
DHFR-203ENST00000505337 PRDM11Q9NQV5 511 aa31.62■■■□□ 2.65
DHFR-203ENST00000505337 KIF16BQ96L93 1317 aa31.61■■■□□ 2.65
DHFR-203ENST00000505337 GCP02774 474 aa31.61■■■□□ 2.65
DHFR-203ENST00000505337 DCTN1Q14203 1278 aa31.61■■■□□ 2.65
DHFR-203ENST00000505337 CRB1P82279 1406 aa31.6■■■□□ 2.65
DHFR-203ENST00000505337 BRPF1P55201 1214 aaPredicted RBP31.6■■■□□ 2.65
DHFR-203ENST00000505337 IP6K1Q92551 441 aa31.6■■■□□ 2.65
DHFR-203ENST00000505337 RGPD5Q99666 1765 aa31.6■■■□□ 2.65
DHFR-203ENST00000505337 NRAPQ86VF7 1730 aa31.59■■■□□ 2.65
DHFR-203ENST00000505337 CHRNA2Q15822 529 aa31.59■■■□□ 2.65
DHFR-203ENST00000505337 VPS72Q15906 364 aa31.59■■■□□ 2.65
DHFR-203ENST00000505337 MS4A1P11836 297 aa31.58■■■□□ 2.65
DHFR-203ENST00000505337 TCERG1O14776 1098 aaKnown RBP31.58■■■□□ 2.65
DHFR-203ENST00000505337 GLI3P10071 1580 aa31.57■■■□□ 2.65
DHFR-203ENST00000505337 CPDO75976 1380 aa31.57■■■□□ 2.64
DHFR-203ENST00000505337 VAMP4O75379 141 aa31.57■■■□□ 2.64
DHFR-203ENST00000505337 TRIM27P14373 513 aa31.57■■■□□ 2.64
DHFR-203ENST00000505337 MTHFSDQ2M296 383 aaKnown RBP31.57■■■□□ 2.64
DHFR-203ENST00000505337 DZIP1LQ8IYY4 767 aaKnown RBP31.57■■■□□ 2.64
DHFR-203ENST00000505337 VIRMAQ69YN4 1812 aaKnown RBP31.56■■■□□ 2.64
DHFR-203ENST00000505337 MVPQ14764 893 aaKnown RBP31.56■■■□□ 2.64
DHFR-203ENST00000505337 ATF7IPQ6VMQ6 1270 aa31.56■■■□□ 2.64
DHFR-203ENST00000505337 TSPYL6Q8N831 410 aa31.55■■■□□ 2.64
DHFR-203ENST00000505337 GAS2L2Q8NHY3 880 aa31.55■■■□□ 2.64
DHFR-203ENST00000505337 NCAPD2Q15021 1401 aa31.54■■■□□ 2.64
DHFR-203ENST00000505337 MCM10Q7L590 875 aa31.53■■■□□ 2.64
DHFR-203ENST00000505337 FTSJ3Q8IY81 847 aaKnown RBP31.53■■■□□ 2.64
DHFR-203ENST00000505337 NOB1Q9ULX3 412 aaKnown RBP31.53■■■□□ 2.64
DHFR-203ENST00000505337 LMO7Q8WWI1 1683 aa31.52■■■□□ 2.64
DHFR-203ENST00000505337 CHL1O00533 1208 aa31.52■■■□□ 2.64
DHFR-203ENST00000505337 TWISTNBQ3B726 338 aaPredicted RBP31.5■■■□□ 2.63
DHFR-203ENST00000505337 ARHGEF25Q86VW2 580 aa31.49■■■□□ 2.63
DHFR-203ENST00000505337 C8orf58Q8NAV2 365 aa31.49■■■□□ 2.63
DHFR-203ENST00000505337 IPO8O15397 1037 aaKnown RBP31.49■■■□□ 2.63
DHFR-203ENST00000505337 LTV1Q96GA3 475 aaPredicted RBP31.49■■■□□ 2.63
DHFR-203ENST00000505337 CCDC9Q9Y3X0 531 aaKnown RBP31.49■■■□□ 2.63
DHFR-203ENST00000505337 MRPL50Q8N5N7 158 aaKnown RBP31.48■■■□□ 2.63
DHFR-203ENST00000505337 COL18A1P39060 1754 aa31.48■■■□□ 2.63
DHFR-203ENST00000505337 HTATSF1O43719 755 aaKnown RBP31.47■■■□□ 2.63
DHFR-203ENST00000505337 IGHDP01880 384 aa31.46■■■□□ 2.63
DHFR-203ENST00000505337 MAP3K5Q99683 1374 aa31.45■■■□□ 2.63
DHFR-203ENST00000505337 ONECUT3O60422 494 aaPredicted RBP31.45■■■□□ 2.63
DHFR-203ENST00000505337 FAM208AQ9UK61 1670 aaKnown RBP31.44■■■□□ 2.62
DHFR-203ENST00000505337 SKAP1Q86WV1 359 aa31.44■■■□□ 2.62
DHFR-203ENST00000505337 RTF1Q92541 710 aaKnown RBP31.44■■■□□ 2.62
DHFR-203ENST00000505337 SPATA31A5Q5VU36 1347 aa31.44■■■□□ 2.62
DHFR-203ENST00000505337 SPATA31A7Q8IWB4 1347 aa31.44■■■□□ 2.62
DHFR-203ENST00000505337 ABCC6O95255 1503 aa31.44■■■□□ 2.62
DHFR-203ENST00000505337 ARHGAP45Q92619 1136 aa31.44■■■□□ 2.62
DHFR-203ENST00000505337 STRN4Q9NRL3 753 aa31.44■■■□□ 2.62
DHFR-203ENST00000505337 DDX19BQ9UMR2 479 aa31.43■■■□□ 2.62
DHFR-203ENST00000505337 PCDHB15Q9Y5E8 787 aa31.43■■■□□ 2.62
DHFR-203ENST00000505337 NBPF6Q5VWK0 638 aa31.42■■■□□ 2.62
DHFR-203ENST00000505337 NBPF4Q96M43 638 aa31.42■■■□□ 2.62
DHFR-203ENST00000505337 CACNA1FO60840 1977 aa31.42■■■□□ 2.62
DHFR-203ENST00000505337 ZBTB7CA1YPR0 619 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms