RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 ANKRD44Q8N8A2 993 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 GRPEL1Q9HAV7 217 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 ATP10DQ9P241 1426 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 ACEP12821 1306 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 GBP4Q96PP9 640 aa19.86■□□□□ 0.77
DDX41-205ENST00000505081 DIP2BQ9P265 1576 aa19.86■□□□□ 0.77
DDX41-205ENST00000505081 MRE11P49959 708 aa19.86■□□□□ 0.77
DDX41-205ENST00000505081 ESF1Q9H501 851 aaKnown RBP19.85■□□□□ 0.77
DDX41-205ENST00000505081 AK9Q5TCS8 1911 aa19.85■□□□□ 0.77
DDX41-205ENST00000505081 SLC4A2P04920 1241 aa19.84■□□□□ 0.77
DDX41-205ENST00000505081 AKAP12Q02952 1782 aa19.84■□□□□ 0.77
DDX41-205ENST00000505081 ITSN1Q15811 1721 aa19.84■□□□□ 0.77
DDX41-205ENST00000505081 SDSP20132 328 aa19.84■□□□□ 0.77
DDX41-205ENST00000505081 G2E3Q7L622 706 aa19.84■□□□□ 0.77
DDX41-205ENST00000505081 RTL1A6NKG5 1358 aa19.83■□□□□ 0.77
DDX41-205ENST00000505081 F6X3S4 739 aa19.83■□□□□ 0.77
DDX41-205ENST00000505081 SLC4A10Q6U841 1118 aa19.82■□□□□ 0.76
DDX41-205ENST00000505081 USP26Q9BXU7 913 aa19.82■□□□□ 0.76
DDX41-205ENST00000505081 KIF24Q5T7B8 1368 aa19.82■□□□□ 0.76
DDX41-205ENST00000505081 REREQ9P2R6 1566 aa19.82■□□□□ 0.76
DDX41-205ENST00000505081 TECPR2O15040 1411 aa19.81■□□□□ 0.76
DDX41-205ENST00000505081 RPAP2Q8IXW5 612 aaPredicted RBP19.81■□□□□ 0.76
DDX41-205ENST00000505081 PEAK1Q9H792 1746 aa19.8■□□□□ 0.76
DDX41-205ENST00000505081 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
DDX41-205ENST00000505081 PKP1Q13835 747 aa19.79■□□□□ 0.76
DDX41-205ENST00000505081 SIRT1Q96EB6 747 aa19.79■□□□□ 0.76
DDX41-205ENST00000505081 MAP3K19Q56UN5 1328 aa19.79■□□□□ 0.76
DDX41-205ENST00000505081 MTHFSDQ2M296 383 aaKnown RBP19.79■□□□□ 0.76
DDX41-205ENST00000505081 OVOS2A0A0J9YW53 1432 aa19.79■□□□□ 0.76
DDX41-205ENST00000505081 TSHZ3Q63HK5 1081 aa19.79■□□□□ 0.76
DDX41-205ENST00000505081 OVOS2Q6IE36 1432 aa19.79■□□□□ 0.76
DDX41-205ENST00000505081 CRB1P82279 1406 aa19.78■□□□□ 0.76
DDX41-205ENST00000505081 RABEP1Q15276 862 aa19.78■□□□□ 0.76
DDX41-205ENST00000505081 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
DDX41-205ENST00000505081 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.78■□□□□ 0.76
DDX41-205ENST00000505081 RIMS1Q86UR5 1692 aaKnown RBP19.78■□□□□ 0.76
DDX41-205ENST00000505081 KIAA0232Q92628 1395 aa19.77■□□□□ 0.76
DDX41-205ENST00000505081 BAG4O95429 457 aaKnown RBP19.77■□□□□ 0.76
DDX41-205ENST00000505081 LTKP29376 864 aa19.77■□□□□ 0.76
DDX41-205ENST00000505081 TSPYL4Q9UJ04 414 aa19.77■□□□□ 0.76
DDX41-205ENST00000505081 PTPRCP08575 1304 aa19.76■□□□□ 0.75
DDX41-205ENST00000505081 NECTIN2Q92692 538 aa19.76■□□□□ 0.75
DDX41-205ENST00000505081 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
DDX41-205ENST00000505081 HDGFP51858 240 aaKnown RBP19.76■□□□□ 0.75
DDX41-205ENST00000505081 TNRQ92752 1358 aa19.76■□□□□ 0.75
DDX41-205ENST00000505081 USP6P35125 1406 aa19.75■□□□□ 0.75
DDX41-205ENST00000505081 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
DDX41-205ENST00000505081 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
DDX41-205ENST00000505081 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
DDX41-205ENST00000505081 ZGPATQ8N5A5 531 aaKnown RBP19.75■□□□□ 0.75
DDX41-205ENST00000505081 EXOC6BQ9Y2D4 811 aa19.75■□□□□ 0.75
DDX41-205ENST00000505081 PLEKHG3A1L390 1219 aa19.74■□□□□ 0.75
DDX41-205ENST00000505081 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
DDX41-205ENST00000505081 MCTP1Q6DN14 999 aa19.74■□□□□ 0.75
DDX41-205ENST00000505081 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
DDX41-205ENST00000505081 CHAMP1Q96JM3 812 aa19.74■□□□□ 0.75
DDX41-205ENST00000505081 DDX49Q9Y6V7 483 aaKnown RBP19.74■□□□□ 0.75
DDX41-205ENST00000505081 RTF1Q92541 710 aaKnown RBP19.73■□□□□ 0.75
DDX41-205ENST00000505081 GOLGA6L22H0YM25 854 aa19.71■□□□□ 0.75
DDX41-205ENST00000505081 CLCN1P35523 988 aa19.71■□□□□ 0.75
DDX41-205ENST00000505081 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
DDX41-205ENST00000505081 CASC1Q6TDU7 716 aa19.71■□□□□ 0.75
DDX41-205ENST00000505081 EYA1Q99502 592 aa19.71■□□□□ 0.75
DDX41-205ENST00000505081 RGPD1P0DJD0 1748 aa19.7■□□□□ 0.74
DDX41-205ENST00000505081 NCLP19338 710 aaKnown RBP19.7■□□□□ 0.74
DDX41-205ENST00000505081 PDE1AP54750 535 aa19.7■□□□□ 0.74
DDX41-205ENST00000505081 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
DDX41-205ENST00000505081 NUTM2GQ5VZR2 741 aa19.7■□□□□ 0.74
DDX41-205ENST00000505081 ISY1Q9ULR0 285 aaKnown RBP19.7■□□□□ 0.74
DDX41-205ENST00000505081 PTPRUQ92729 1446 aa19.69■□□□□ 0.74
DDX41-205ENST00000505081 CLEC17AQ6ZS10 378 aa19.69■□□□□ 0.74
DDX41-205ENST00000505081 HMMRO75330 724 aa19.69■□□□□ 0.74
DDX41-205ENST00000505081 AMPHP49418 695 aa19.69■□□□□ 0.74
DDX41-205ENST00000505081 FOXD4L5Q5VV16 416 aaPredicted RBP19.69■□□□□ 0.74
DDX41-205ENST00000505081 FOXD4L4Q8WXT5 416 aaPredicted RBP19.69■□□□□ 0.74
DDX41-205ENST00000505081 NAP1L5Q96NT1 182 aaPredicted RBP19.69■□□□□ 0.74
DDX41-205ENST00000505081 ERC2O15083 957 aa19.68■□□□□ 0.74
DDX41-205ENST00000505081 CYP2E1P05181 493 aaPredicted RBP19.68■□□□□ 0.74
DDX41-205ENST00000505081 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
DDX41-205ENST00000505081 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
DDX41-205ENST00000505081 PNMA6EA0A0J9YXQ4 647 aa19.68■□□□□ 0.74
DDX41-205ENST00000505081 ESPNB1AK53 854 aa19.68■□□□□ 0.74
DDX41-205ENST00000505081 KLHL40Q2TBA0 621 aa19.68■□□□□ 0.74
DDX41-205ENST00000505081 TOPAZ1Q8N9V7 1692 aa19.68■□□□□ 0.74
DDX41-205ENST00000505081 ARHGEF10O15013 1369 aa19.67■□□□□ 0.74
DDX41-205ENST00000505081 PTMSP20962 102 aa19.67■□□□□ 0.74
DDX41-205ENST00000505081 NGDNQ8NEJ9 315 aaKnown RBP19.67■□□□□ 0.74
DDX41-205ENST00000505081 ZDHHC9Q9Y397 364 aa19.67■□□□□ 0.74
DDX41-205ENST00000505081 ST18O60284 1047 aa19.67■□□□□ 0.74
DDX41-205ENST00000505081 CCT4P50991 539 aaKnown RBP19.67■□□□□ 0.74
DDX41-205ENST00000505081 CAVIN1Q6NZI2 390 aaKnown RBP19.67■□□□□ 0.74
DDX41-205ENST00000505081 REC8O95072 547 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 GNAI2P04899 355 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
DDX41-205ENST00000505081 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 SSH2Q76I76 1423 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 NUCB2P80303 420 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 LMBRD1Q9NUN5 540 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 AMOTL2Q9Y2J4 779 aa19.66■□□□□ 0.74
DDX41-205ENST00000505081 TRIM44Q96DX7 344 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms