RNA–Protein interactions for RNA: ENST00000505072.5

ATP2C1-209, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 556 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-209ENST00000505072 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
ATP2C1-209ENST00000505072 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.36
ATP2C1-209ENST00000505072 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
ATP2C1-209ENST00000505072 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
ATP2C1-209ENST00000505072 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
ATP2C1-209ENST00000505072 IP6K1Q92551 441 aa17.31■□□□□ 0.36
ATP2C1-209ENST00000505072 FAM208AQ9UK61 1670 aaKnown RBP17.3■□□□□ 0.36
ATP2C1-209ENST00000505072 CD163L1Q9NR16 1453 aa17.3■□□□□ 0.36
ATP2C1-209ENST00000505072 USP47Q96K76 1375 aa17.28■□□□□ 0.36
ATP2C1-209ENST00000505072 FLAD1Q8NFF5 587 aa17.28■□□□□ 0.36
ATP2C1-209ENST00000505072 KIF3CO14782 793 aa17.27■□□□□ 0.36
ATP2C1-209ENST00000505072 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
ATP2C1-209ENST00000505072 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.36
ATP2C1-209ENST00000505072 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.36
ATP2C1-209ENST00000505072 ROCK2O75116 1388 aaKnown RBP17.27■□□□□ 0.35
ATP2C1-209ENST00000505072 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
ATP2C1-209ENST00000505072 APLP1P51693 650 aa17.26■□□□□ 0.35
ATP2C1-209ENST00000505072 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
ATP2C1-209ENST00000505072 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
ATP2C1-209ENST00000505072 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
ATP2C1-209ENST00000505072 C5P01031 1676 aa17.24■□□□□ 0.35
ATP2C1-209ENST00000505072 MEGF6O75095 1541 aa17.23■□□□□ 0.35
ATP2C1-209ENST00000505072 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
ATP2C1-209ENST00000505072 DNAJC5GQ8N7S2 189 aa17.22■□□□□ 0.35
ATP2C1-209ENST00000505072 HOXC9P31274 260 aa17.21■□□□□ 0.35
ATP2C1-209ENST00000505072 SLC12A5Q9H2X9 1139 aa17.21■□□□□ 0.35
ATP2C1-209ENST00000505072 A0A1W2PP64 1363 aa17.2■□□□□ 0.34
ATP2C1-209ENST00000505072 TAF1LQ8IZX4 1826 aa17.2■□□□□ 0.34
ATP2C1-209ENST00000505072 TERF2IPQ9NYB0 399 aa17.2■□□□□ 0.34
ATP2C1-209ENST00000505072 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
ATP2C1-209ENST00000505072 MAP3K19Q56UN5 1328 aa17.2■□□□□ 0.34
ATP2C1-209ENST00000505072 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
ATP2C1-209ENST00000505072 TOMM70O94826 608 aa17.19■□□□□ 0.34
ATP2C1-209ENST00000505072 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
ATP2C1-209ENST00000505072 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
ATP2C1-209ENST00000505072 RGPD2P0DJD1 1756 aa17.18■□□□□ 0.34
ATP2C1-209ENST00000505072 AMPHP49418 695 aa17.18■□□□□ 0.34
ATP2C1-209ENST00000505072 AK7Q96M32 723 aa17.17■□□□□ 0.34
ATP2C1-209ENST00000505072 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
ATP2C1-209ENST00000505072 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
ATP2C1-209ENST00000505072 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
ATP2C1-209ENST00000505072 COG3Q96JB2 828 aa17.16■□□□□ 0.34
ATP2C1-209ENST00000505072 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
ATP2C1-209ENST00000505072 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
ATP2C1-209ENST00000505072 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
ATP2C1-209ENST00000505072 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
ATP2C1-209ENST00000505072 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
ATP2C1-209ENST00000505072 SMARCC1Q92922 1105 aaPredicted RBP17.14■□□□□ 0.33
ATP2C1-209ENST00000505072 PUS7Q96PZ0 661 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-209ENST00000505072 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
ATP2C1-209ENST00000505072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 PHF14O94880 888 aa17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 FBLN1P23142 703 aa17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 SSFA2P28290 1259 aa17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
ATP2C1-209ENST00000505072 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
ATP2C1-209ENST00000505072 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
ATP2C1-209ENST00000505072 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
ATP2C1-209ENST00000505072 COL13A1Q5TAT6 717 aaPredicted RBP17.11■□□□□ 0.33
ATP2C1-209ENST00000505072 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
ATP2C1-209ENST00000505072 PCNTO95613 3336 aa17.11■□□□□ 0.33
ATP2C1-209ENST00000505072 KLRG1Q96E93 195 aa17.1■□□□□ 0.33
ATP2C1-209ENST00000505072 SIN3AQ96ST3 1273 aa17.1■□□□□ 0.33
ATP2C1-209ENST00000505072 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
ATP2C1-209ENST00000505072 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
ATP2C1-209ENST00000505072 PXDNLA1KZ92 1463 aa17.1■□□□□ 0.33
ATP2C1-209ENST00000505072 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
ATP2C1-209ENST00000505072 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
ATP2C1-209ENST00000505072 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
ATP2C1-209ENST00000505072 CYP27B1O15528 508 aa17.08■□□□□ 0.32
ATP2C1-209ENST00000505072 ITGB4P16144 1822 aa17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 TGFB2P61812 414 aa17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 LINC00116Q8NCU8 138 aa17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 BCS1LQ9Y276 419 aa17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
ATP2C1-209ENST00000505072 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-209ENST00000505072 MMP10P09238 476 aa17.06■□□□□ 0.32
ATP2C1-209ENST00000505072 PIGBQ92521 554 aa17.06■□□□□ 0.32
ATP2C1-209ENST00000505072 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
ATP2C1-209ENST00000505072 CAPN15O75808 1086 aa17.05■□□□□ 0.32
ATP2C1-209ENST00000505072 SIK1P57059 783 aa17.05■□□□□ 0.32
ATP2C1-209ENST00000505072 FSTL1Q12841 308 aa17.05■□□□□ 0.32
ATP2C1-209ENST00000505072 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
ATP2C1-209ENST00000505072 ARHGAP27Q6ZUM4 889 aa17.05■□□□□ 0.32
ATP2C1-209ENST00000505072 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
ATP2C1-209ENST00000505072 PRELPP51888 382 aa17.04■□□□□ 0.32
ATP2C1-209ENST00000505072 HTRA3P83110 453 aa17.04■□□□□ 0.32
ATP2C1-209ENST00000505072 C16orf71Q8IYS4 520 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-209ENST00000505072 TNS4Q8IZW8 715 aa17.04■□□□□ 0.32
ATP2C1-209ENST00000505072 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-209ENST00000505072 INSRP06213 1382 aa17.03■□□□□ 0.32
ATP2C1-209ENST00000505072 GNPATO15228 680 aa17.03■□□□□ 0.32
ATP2C1-209ENST00000505072 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
ATP2C1-209ENST00000505072 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
ATP2C1-209ENST00000505072 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
ATP2C1-209ENST00000505072 ITPK1Q13572 414 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms