RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 BICD2Q8TD16 824 aa9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 TSPY26PQ9H489 355 aa9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 COL16A1Q07092 1604 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 HFM1A2PYH4 1435 aa9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-208ENST00000504948 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 SMARCA5O60264 1052 aaPredicted RBP9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 SASS6Q6UVJ0 657 aa9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 FMN2Q9NZ56 1722 aa9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 RLBP1P12271 317 aa9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 DUSP27Q5VZP5 1158 aa9.46□□□□□ -0.89
ATP2C1-208ENST00000504948 GOLGA6L19H0YKK7 550 aa9.46□□□□□ -0.9
ATP2C1-208ENST00000504948 NOB1Q9ULX3 412 aaKnown RBP9.46□□□□□ -0.9
ATP2C1-208ENST00000504948 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.9
ATP2C1-208ENST00000504948 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 NCOA3Q9Y6Q9 1424 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 RBSNQ9H1K0 784 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 TRPM3Q9HCF6 1732 aaPredicted RBP9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 NUCB2P80303 420 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 ZSCAN23Q3MJ62 389 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 DIAPH3Q9NSV4 1193 aa9.45□□□□□ -0.9
ATP2C1-208ENST00000504948 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 ZGPATQ8N5A5 531 aaKnown RBP9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 RIPK4P57078 832 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 DMRT2Q9Y5R5 561 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 NRDCO43847 1150 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 MTHFSP49914 203 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 OFD1O75665 1012 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 CCDC112Q8NEF3 446 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
ATP2C1-208ENST00000504948 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 PHF14O94880 888 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 PPARDQ03181 441 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 NAIPQ13075 1403 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 WNK3Q9BYP7 1800 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 MTERF4Q7Z6M4 381 aaKnown RBP9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 ARHGEF28Q8N1W1 1705 aaKnown RBP9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 PKP1Q13835 747 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 TAF7LQ5H9L4 462 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 AFAP1Q8N556 730 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 TMEM57Q8N5G2 664 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 STK3Q13188 491 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 ZSWIM4Q9H7M6 989 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
ATP2C1-208ENST00000504948 LTV1Q96GA3 475 aaPredicted RBP9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 PES1O00541 588 aaKnown RBP9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 KIF16BQ96L93 1317 aa9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 ADCY5O95622 1261 aa9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 SLFN5Q08AF3 891 aa9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 GIMAP6Q6P9H5 292 aa9.42□□□□□ -0.9
ATP2C1-208ENST00000504948 CCDC66A2RUB6 948 aa9.41□□□□□ -0.9
ATP2C1-208ENST00000504948 MNS1Q8NEH6 495 aa9.41□□□□□ -0.9
ATP2C1-208ENST00000504948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATP2C1-208ENST00000504948 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
ATP2C1-208ENST00000504948 MYOM2P54296 1465 aa9.4□□□□□ -0.9
ATP2C1-208ENST00000504948 HSP90AB3PQ58FF7 597 aa9.4□□□□□ -0.9
ATP2C1-208ENST00000504948 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
ATP2C1-208ENST00000504948 SMC3Q9UQE7 1217 aa9.4□□□□□ -0.9
ATP2C1-208ENST00000504948 FBLN1P23142 703 aa9.4□□□□□ -0.91
ATP2C1-208ENST00000504948 LMOD2Q6P5Q4 547 aa9.4□□□□□ -0.91
ATP2C1-208ENST00000504948 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.91
ATP2C1-208ENST00000504948 ZKSCAN5Q9Y2L8 839 aa9.4□□□□□ -0.91
ATP2C1-208ENST00000504948 CDC42BPGQ6DT37 1551 aa9.4□□□□□ -0.91
ATP2C1-208ENST00000504948 HTATSF1O43719 755 aaKnown RBP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 CHMP4CQ96CF2 233 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 SCAF11Q99590 1463 aaKnown RBP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 DYNC1I1O14576 645 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 CDC45O75419 566 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 ROBO1Q9Y6N7 1651 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 GGT6Q6P531 493 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 C10orf67Q8IYJ2 551 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 C16orf71Q8IYS4 520 aaPredicted RBP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 CCDC94Q9BW85 323 aaPredicted RBP9.39□□□□□ -0.91
ATP2C1-208ENST00000504948 ALS2Q96Q42 1657 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 TECPR2O15040 1411 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 ADGRB1O14514 1584 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 DLC1Q96QB1 1528 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 MVPQ14764 893 aaKnown RBP9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 PDILTQ8N807 584 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 ADAMTS13Q76LX8 1427 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 H3BQV1 296 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 NOC3LQ8WTT2 800 aaKnown RBP9.38□□□□□ -0.91
ATP2C1-208ENST00000504948 SSH1Q8WYL5 1049 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms