RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PREX2Q70Z35 1606 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 MAST1Q9Y2H9 1570 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 CAMK4Q16566 473 aa9.24□□□□□ -0.93
NEDD9-208ENST00000504387 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
NEDD9-208ENST00000504387 PTPRTO14522 1441 aa9.24□□□□□ -0.93
NEDD9-208ENST00000504387 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
NEDD9-208ENST00000504387 CYP2E1P05181 493 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-208ENST00000504387 ERICH4A6NGS2 130 aa9.24□□□□□ -0.93
NEDD9-208ENST00000504387 FYB1O15117 783 aa9.24□□□□□ -0.93
NEDD9-208ENST00000504387 C16orf45Q96MC5 204 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-208ENST00000504387 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
NEDD9-208ENST00000504387 EIF2AK4Q9P2K8 1649 aaKnown RBP9.23□□□□□ -0.93
NEDD9-208ENST00000504387 FGD1P98174 961 aa9.23□□□□□ -0.93
NEDD9-208ENST00000504387 HS1BP3Q53T59 392 aa9.23□□□□□ -0.93
NEDD9-208ENST00000504387 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.23□□□□□ -0.93
NEDD9-208ENST00000504387 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
NEDD9-208ENST00000504387 C14orf37Q86TY3 774 aa9.23□□□□□ -0.93
NEDD9-208ENST00000504387 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
NEDD9-208ENST00000504387 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
NEDD9-208ENST00000504387 CWC22Q9HCG8 908 aaKnown RBP9.23□□□□□ -0.93
NEDD9-208ENST00000504387 TERF1P54274 439 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 ERC2O15083 957 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 REC8O95072 547 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 FAM173BQ6P4H8 233 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 IL1RAPL2Q9NP60 686 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 KCNA4P22459 653 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 MTERF4Q7Z6M4 381 aaKnown RBP9.22□□□□□ -0.93
NEDD9-208ENST00000504387 FERMT3Q86UX7 667 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 NME9Q86XW9 330 aa9.22□□□□□ -0.93
NEDD9-208ENST00000504387 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 RIMBP3CA6NJZ7 1639 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 RIMBP3BA6NNM3 1639 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 RIMBP3Q9UFD9 1639 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 MBD3O95983 291 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 LRMPQ12912 555 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 CHAF1AQ13111 956 aaPredicted RBP9.21□□□□□ -0.93
NEDD9-208ENST00000504387 MCM10Q7L590 875 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.93
NEDD9-208ENST00000504387 SYAP1Q96A49 352 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-208ENST00000504387 SYTL4Q96C24 671 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-208ENST00000504387 IFT57Q9NWB7 429 aa9.21□□□□□ -0.94
NEDD9-208ENST00000504387 ZMYM3Q14202 1370 aa9.21□□□□□ -0.94
NEDD9-208ENST00000504387 VPS37CA5D8V6 355 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-208ENST00000504387 AP5Z1O43299 807 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 CT47B1P0C2W7 299 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-208ENST00000504387 CYB5RLQ6IPT4 315 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 CKAP2LQ8IYA6 745 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 PTGS1P23219 599 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 CLEC17AQ6ZS10 378 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 LTV1Q96GA3 475 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-208ENST00000504387 DCTPP1Q9H773 170 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 IBTKQ9P2D0 1353 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-208ENST00000504387 IQSEC2Q5JU85 1478 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
NEDD9-208ENST00000504387 KDM5AP29375 1690 aaKnown RBP9.19□□□□□ -0.94
NEDD9-208ENST00000504387 MCM5P33992 734 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 UNC5CLQ8IV45 518 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 NRBP1Q9UHY1 535 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 NUTM1Q86Y26 1132 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 IL25Q9H293 177 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 ABCC11Q96J66 1382 aa9.19□□□□□ -0.94
NEDD9-208ENST00000504387 CLTCL1P53675 1640 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 MYOM1P52179 1685 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 BRD1O95696 1058 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 SLC4A2P04920 1241 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 CEP85Q6P2H3 762 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 CHMP4AQ9BY43 222 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
NEDD9-208ENST00000504387 FOSBP53539 338 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 HMGN5P82970 282 aaKnown RBP9.18□□□□□ -0.94
NEDD9-208ENST00000504387 LUZP1Q86V48 1076 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 A0A087WWV3 80 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 DNM1Q05193 864 aaKnown RBP9.18□□□□□ -0.94
NEDD9-208ENST00000504387 TCEANC2Q96MN5 208 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 KCNF1Q9H3M0 494 aa9.18□□□□□ -0.94
NEDD9-208ENST00000504387 IQGAP3Q86VI3 1631 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-208ENST00000504387 KCNJ4P48050 445 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 PDE1AP54750 535 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 GNAI1P63096 354 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 SULT6B1Q6IMI4 303 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 G2E3Q7L622 706 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
NEDD9-208ENST00000504387 ST7Q9NRC1 585 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 PLXNC1O60486 1568 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 PDE4CQ08493 712 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
NEDD9-208ENST00000504387 RTF1Q92541 710 aaKnown RBP9.17□□□□□ -0.94
NEDD9-208ENST00000504387 TRMT1Q9NXH9 659 aaKnown RBP9.17□□□□□ -0.94
NEDD9-208ENST00000504387 TFIP11Q9UBB9 837 aaKnown RBP9.17□□□□□ -0.94
NEDD9-208ENST00000504387 SPG7Q9UQ90 795 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms