RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
HOXC6-203ENST00000504315 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
HOXC6-203ENST00000504315 PAPPAQ13219 1627 aa18.85■□□□□ 0.61
HOXC6-203ENST00000504315 ITGB4P16144 1822 aa18.84■□□□□ 0.61
HOXC6-203ENST00000504315 WASHC2AQ641Q2 1341 aa18.84■□□□□ 0.61
HOXC6-203ENST00000504315 KCNQ2O43526 872 aa18.84■□□□□ 0.61
HOXC6-203ENST00000504315 PROM2Q8N271 834 aa18.83■□□□□ 0.6
HOXC6-203ENST00000504315 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
HOXC6-203ENST00000504315 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
HOXC6-203ENST00000504315 QSER1Q2KHR3 1735 aa18.81■□□□□ 0.6
HOXC6-203ENST00000504315 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
HOXC6-203ENST00000504315 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
HOXC6-203ENST00000504315 TOGARAM1Q9Y4F4 1720 aa18.8■□□□□ 0.6
HOXC6-203ENST00000504315 USHBP1Q8N6Y0 703 aa18.8■□□□□ 0.6
HOXC6-203ENST00000504315 DDX54Q8TDD1 881 aaKnown RBP18.8■□□□□ 0.6
HOXC6-203ENST00000504315 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
HOXC6-203ENST00000504315 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
HOXC6-203ENST00000504315 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
HOXC6-203ENST00000504315 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
HOXC6-203ENST00000504315 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
HOXC6-203ENST00000504315 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.6
HOXC6-203ENST00000504315 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
HOXC6-203ENST00000504315 AMER1Q5JTC6 1135 aaPredicted RBP18.77■□□□□ 0.6
HOXC6-203ENST00000504315 KNSTRNQ9Y448 316 aa18.76■□□□□ 0.59
HOXC6-203ENST00000504315 TAF1LQ8IZX4 1826 aa18.76■□□□□ 0.59
HOXC6-203ENST00000504315 PCDH11XQ9BZA7 1347 aa18.75■□□□□ 0.59
HOXC6-203ENST00000504315 PCDH11YQ9BZA8 1340 aa18.75■□□□□ 0.59
HOXC6-203ENST00000504315 EYA1Q99502 592 aa18.75■□□□□ 0.59
HOXC6-203ENST00000504315 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
HOXC6-203ENST00000504315 TNNT2P45379 298 aaPredicted RBP18.74■□□□□ 0.59
HOXC6-203ENST00000504315 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
HOXC6-203ENST00000504315 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
HOXC6-203ENST00000504315 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
HOXC6-203ENST00000504315 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
HOXC6-203ENST00000504315 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
HOXC6-203ENST00000504315 CYP27B1O15528 508 aa18.71■□□□□ 0.59
HOXC6-203ENST00000504315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.59
HOXC6-203ENST00000504315 COL24A1Q17RW2 1714 aa18.71■□□□□ 0.59
HOXC6-203ENST00000504315 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
HOXC6-203ENST00000504315 SLC15A2Q16348 729 aa18.7■□□□□ 0.58
HOXC6-203ENST00000504315 C5P01031 1676 aa18.69■□□□□ 0.58
HOXC6-203ENST00000504315 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-203ENST00000504315 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
HOXC6-203ENST00000504315 LRRC4BQ9NT99 713 aa18.69■□□□□ 0.58
HOXC6-203ENST00000504315 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
HOXC6-203ENST00000504315 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
HOXC6-203ENST00000504315 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
HOXC6-203ENST00000504315 SPON1Q9HCB6 807 aa18.66■□□□□ 0.58
HOXC6-203ENST00000504315 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
HOXC6-203ENST00000504315 KDRP35968 1356 aa18.65■□□□□ 0.58
HOXC6-203ENST00000504315 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
HOXC6-203ENST00000504315 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
HOXC6-203ENST00000504315 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
HOXC6-203ENST00000504315 PHKG2P15735 406 aa18.62■□□□□ 0.57
HOXC6-203ENST00000504315 IL13P35225 146 aa18.62■□□□□ 0.57
HOXC6-203ENST00000504315 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
HOXC6-203ENST00000504315 ZNF831Q5JPB2 1677 aa18.62■□□□□ 0.57
HOXC6-203ENST00000504315 UBR3Q6ZT12 1888 aa18.62■□□□□ 0.57
HOXC6-203ENST00000504315 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
HOXC6-203ENST00000504315 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
HOXC6-203ENST00000504315 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
HOXC6-203ENST00000504315 MTHFSP49914 203 aa18.6■□□□□ 0.57
HOXC6-203ENST00000504315 PTGER2P43116 358 aa18.59■□□□□ 0.57
HOXC6-203ENST00000504315 CC2D1BQ5T0F9 858 aaKnown RBP18.59■□□□□ 0.57
HOXC6-203ENST00000504315 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
HOXC6-203ENST00000504315 CCNL1Q9UK58 526 aaPredicted RBP18.59■□□□□ 0.57
HOXC6-203ENST00000504315 KCNQ4P56696 695 aa18.58■□□□□ 0.56
HOXC6-203ENST00000504315 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.56
HOXC6-203ENST00000504315 PIGBQ92521 554 aa18.58■□□□□ 0.56
HOXC6-203ENST00000504315 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
HOXC6-203ENST00000504315 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
HOXC6-203ENST00000504315 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
HOXC6-203ENST00000504315 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
HOXC6-203ENST00000504315 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
HOXC6-203ENST00000504315 SMARCC1Q92922 1105 aaPredicted RBP18.57■□□□□ 0.56
HOXC6-203ENST00000504315 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
HOXC6-203ENST00000504315 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
HOXC6-203ENST00000504315 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
HOXC6-203ENST00000504315 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
HOXC6-203ENST00000504315 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
HOXC6-203ENST00000504315 COL5A3P25940 1745 aaPredicted RBP18.56■□□□□ 0.56
HOXC6-203ENST00000504315 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
HOXC6-203ENST00000504315 CICQ96RK0 1608 aaPredicted RBP18.54■□□□□ 0.56
HOXC6-203ENST00000504315 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
HOXC6-203ENST00000504315 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
HOXC6-203ENST00000504315 TMOD3Q9NYL9 352 aa18.54■□□□□ 0.56
HOXC6-203ENST00000504315 ERVV-2B6SEH9 535 aa18.53■□□□□ 0.56
HOXC6-203ENST00000504315 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
HOXC6-203ENST00000504315 PPP1R1BQ9UD71 204 aaPredicted RBP18.53■□□□□ 0.56
HOXC6-203ENST00000504315 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
HOXC6-203ENST00000504315 MYH14Q7Z406 1995 aaKnown RBP18.52■□□□□ 0.56
HOXC6-203ENST00000504315 TFCP2L1Q9NZI6 479 aa18.52■□□□□ 0.56
HOXC6-203ENST00000504315 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
HOXC6-203ENST00000504315 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
HOXC6-203ENST00000504315 SIK1P57059 783 aa18.5■□□□□ 0.55
HOXC6-203ENST00000504315 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
HOXC6-203ENST00000504315 MRC1P22897 1456 aa18.5■□□□□ 0.55
HOXC6-203ENST00000504315 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
HOXC6-203ENST00000504315 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
HOXC6-203ENST00000504315 SIPA1L3O60292 1781 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms