RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 WASHC2AQ641Q2 1341 aa23.2■■□□□ 1.3
MATR3-208ENST00000504045 ACSBG1Q96GR2 724 aa23.2■■□□□ 1.3
MATR3-208ENST00000504045 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
MATR3-208ENST00000504045 KNSTRNQ9Y448 316 aa23.18■■□□□ 1.3
MATR3-208ENST00000504045 PKD1L3Q7Z443 1732 aa23.17■■□□□ 1.3
MATR3-208ENST00000504045 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
MATR3-208ENST00000504045 PLSCR1O15162 318 aa23.16■■□□□ 1.3
MATR3-208ENST00000504045 R3HDM1Q15032 1099 aaKnown RBP23.16■■□□□ 1.3
MATR3-208ENST00000504045 AMER1Q5JTC6 1135 aaPredicted RBP23.16■■□□□ 1.3
MATR3-208ENST00000504045 MORC1Q86VD1 984 aa23.15■■□□□ 1.3
MATR3-208ENST00000504045 ZCRB1Q8TBF4 217 aaKnown RBP23.15■■□□□ 1.3
MATR3-208ENST00000504045 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.3
MATR3-208ENST00000504045 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
MATR3-208ENST00000504045 PROM2Q8N271 834 aa23.13■■□□□ 1.29
MATR3-208ENST00000504045 EYA1Q99502 592 aa23.13■■□□□ 1.29
MATR3-208ENST00000504045 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
MATR3-208ENST00000504045 EIF4A2Q14240 407 aaKnown RBP23.12■■□□□ 1.29
MATR3-208ENST00000504045 LRP5O75197 1615 aa23.11■■□□□ 1.29
MATR3-208ENST00000504045 ITGB4P16144 1822 aa23.11■■□□□ 1.29
MATR3-208ENST00000504045 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
MATR3-208ENST00000504045 TXNRD1Q16881 649 aa23.08■■□□□ 1.28
MATR3-208ENST00000504045 LY75O60449 1722 aa23.07■■□□□ 1.28
MATR3-208ENST00000504045 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
MATR3-208ENST00000504045 CC2D1BQ5T0F9 858 aaKnown RBP23.06■■□□□ 1.28
MATR3-208ENST00000504045 NBPF14Q5TI25 921 aa23.06■■□□□ 1.28
MATR3-208ENST00000504045 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
MATR3-208ENST00000504045 CYP27B1O15528 508 aa23.05■■□□□ 1.28
MATR3-208ENST00000504045 PRIM1P49642 420 aaKnown RBP23.05■■□□□ 1.28
MATR3-208ENST00000504045 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
MATR3-208ENST00000504045 PCDH11XQ9BZA7 1347 aa23.05■■□□□ 1.28
MATR3-208ENST00000504045 PCDH11YQ9BZA8 1340 aa23.05■■□□□ 1.28
MATR3-208ENST00000504045 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
MATR3-208ENST00000504045 IGSF1Q8N6C5 1336 aa23.03■■□□□ 1.28
MATR3-208ENST00000504045 CNGB1Q14028 1251 aaPredicted RBP23.02■■□□□ 1.28
MATR3-208ENST00000504045 NPC1L1Q9UHC9 1359 aa22.99■■□□□ 1.27
MATR3-208ENST00000504045 TUBGCP6Q96RT7 1819 aa22.99■■□□□ 1.27
MATR3-208ENST00000504045 MTHFSP49914 203 aa22.98■■□□□ 1.27
MATR3-208ENST00000504045 AEBP1Q8IUX7 1158 aa22.98■■□□□ 1.27
MATR3-208ENST00000504045 LRRC4BQ9NT99 713 aa22.98■■□□□ 1.27
MATR3-208ENST00000504045 SPG7Q9UQ90 795 aa22.98■■□□□ 1.27
MATR3-208ENST00000504045 IL13P35225 146 aa22.97■■□□□ 1.27
MATR3-208ENST00000504045 PDGFDQ9GZP0 370 aaPredicted RBP22.97■■□□□ 1.27
MATR3-208ENST00000504045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.272e-9■■□□□ 14.4
MATR3-208ENST00000504045 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
MATR3-208ENST00000504045 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
MATR3-208ENST00000504045 KCNQ4P56696 695 aa22.95■■□□□ 1.26
MATR3-208ENST00000504045 NKX1-1Q15270 411 aaPredicted RBP22.94■■□□□ 1.26
MATR3-208ENST00000504045 STK32BQ9NY57 414 aa22.94■■□□□ 1.26
MATR3-208ENST00000504045 SLC15A2Q16348 729 aa22.93■■□□□ 1.26
MATR3-208ENST00000504045 QSER1Q2KHR3 1735 aa22.93■■□□□ 1.26
MATR3-208ENST00000504045 PHKG2P15735 406 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 MPRIPQ6WCQ1 1025 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 COL3A1P02461 1466 aaPredicted RBP22.92■■□□□ 1.26
MATR3-208ENST00000504045 C5P01031 1676 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 KDRP35968 1356 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 ZNF827Q17R98 1081 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 SULT6B1Q6IMI4 303 aa22.92■■□□□ 1.26
MATR3-208ENST00000504045 IFNL2Q8IZJ0 200 aa22.91■■□□□ 1.26
MATR3-208ENST00000504045 SLC27A3Q5K4L6 730 aa22.89■■□□□ 1.26
MATR3-208ENST00000504045 SCN11AQ9UI33 1791 aa22.88■■□□□ 1.25
MATR3-208ENST00000504045 PIGBQ92521 554 aa22.87■■□□□ 1.25
MATR3-208ENST00000504045 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
MATR3-208ENST00000504045 CCNL1Q9UK58 526 aaPredicted RBP22.87■■□□□ 1.25
MATR3-208ENST00000504045 PALLDQ8WX93 1383 aa22.86■■□□□ 1.25
MATR3-208ENST00000504045 DIAPH1O60610 1272 aaKnown RBP22.86■■□□□ 1.25
MATR3-208ENST00000504045 HMOX1P09601 288 aa22.86■■□□□ 1.25
MATR3-208ENST00000504045 ZNF530Q6P9A1 599 aaPredicted RBP22.86■■□□□ 1.25
MATR3-208ENST00000504045 AKT1S1Q96B36 256 aa22.86■■□□□ 1.25
MATR3-208ENST00000504045 KDM6AO15550 1401 aaPredicted RBP22.85■■□□□ 1.25
MATR3-208ENST00000504045 ZBTB7AO95365 584 aa22.85■■□□□ 1.25
MATR3-208ENST00000504045 SPON1Q9HCB6 807 aa22.84■■□□□ 1.25
MATR3-208ENST00000504045 AMOTQ4VCS5 1084 aa22.83■■□□□ 1.25
MATR3-208ENST00000504045 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
MATR3-208ENST00000504045 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
MATR3-208ENST00000504045 UBR3Q6ZT12 1888 aa22.8■■□□□ 1.24
MATR3-208ENST00000504045 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
MATR3-208ENST00000504045 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
MATR3-208ENST00000504045 ASAP1Q9ULH1 1129 aa22.8■■□□□ 1.24
MATR3-208ENST00000504045 ATF5Q9Y2D1 282 aaPredicted RBP22.8■■□□□ 1.24
MATR3-208ENST00000504045 COL24A1Q17RW2 1714 aa22.8■■□□□ 1.24
MATR3-208ENST00000504045 PNPLA7Q6ZV29 1317 aa22.79■■□□□ 1.24
MATR3-208ENST00000504045 SMARCC1Q92922 1105 aaPredicted RBP22.79■■□□□ 1.24
MATR3-208ENST00000504045 HSP90AB1P08238 724 aaKnown RBP22.78■■□□□ 1.24
MATR3-208ENST00000504045 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
MATR3-208ENST00000504045 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
MATR3-208ENST00000504045 PTGER2P43116 358 aa22.77■■□□□ 1.24
MATR3-208ENST00000504045 TFCP2L1Q9NZI6 479 aa22.77■■□□□ 1.24
MATR3-208ENST00000504045 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.24
MATR3-208ENST00000504045 ATG3Q9NT62 314 aa22.77■■□□□ 1.24
MATR3-208ENST00000504045 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
MATR3-208ENST00000504045 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
MATR3-208ENST00000504045 PPP1R1BQ9UD71 204 aaPredicted RBP22.75■■□□□ 1.23
MATR3-208ENST00000504045 COL5A3P25940 1745 aaPredicted RBP22.75■■□□□ 1.23
MATR3-208ENST00000504045 ZNF831Q5JPB2 1677 aa22.75■■□□□ 1.23
MATR3-208ENST00000504045 LOC102724428A0A0B4J2F2 783 aa22.74■■□□□ 1.23
MATR3-208ENST00000504045 SIK1P57059 783 aa22.74■■□□□ 1.23
MATR3-208ENST00000504045 MTHFSDQ2M296 383 aaKnown RBP22.74■■□□□ 1.23
MATR3-208ENST00000504045 CABP4P57796 275 aa22.73■■□□□ 1.23
MATR3-208ENST00000504045 SGIP1Q9BQI5 828 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms