RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
ARHGEF28-206ENST00000504003 GGNBP2Q9H3C7 697 aa12.39□□□□□ -0.43
ARHGEF28-206ENST00000504003 SBNO1A3KN83 1393 aa12.39□□□□□ -0.43
ARHGEF28-206ENST00000504003 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
ARHGEF28-206ENST00000504003 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
ARHGEF28-206ENST00000504003 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
ARHGEF28-206ENST00000504003 NME9Q86XW9 330 aa12.37□□□□□ -0.43
ARHGEF28-206ENST00000504003 KCNH5Q8NCM2 988 aa12.37□□□□□ -0.43
ARHGEF28-206ENST00000504003 ARHGEF10O15013 1369 aa12.37□□□□□ -0.43
ARHGEF28-206ENST00000504003 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
ARHGEF28-206ENST00000504003 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
ARHGEF28-206ENST00000504003 NHSL1Q5SYE7 1610 aa12.36□□□□□ -0.43
ARHGEF28-206ENST00000504003 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
ARHGEF28-206ENST00000504003 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF28-206ENST00000504003 LRRC59Q96AG4 307 aaKnown RBP12.35□□□□□ -0.43
ARHGEF28-206ENST00000504003 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
ARHGEF28-206ENST00000504003 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
ARHGEF28-206ENST00000504003 TRPM3Q9HCF6 1732 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF28-206ENST00000504003 RGL2O15211 777 aa12.34□□□□□ -0.43
ARHGEF28-206ENST00000504003 PIP4K2BP78356 416 aa12.34□□□□□ -0.43
ARHGEF28-206ENST00000504003 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF28-206ENST00000504003 SOS2Q07890 1332 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF28-206ENST00000504003 PXDNQ92626 1479 aa12.34□□□□□ -0.43
ARHGEF28-206ENST00000504003 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 PIK3C2AO00443 1686 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 ZNF687Q8N1G0 1237 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF28-206ENST00000504003 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
ARHGEF28-206ENST00000504003 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
ARHGEF28-206ENST00000504003 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
ARHGEF28-206ENST00000504003 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
ARHGEF28-206ENST00000504003 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
ARHGEF28-206ENST00000504003 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
ARHGEF28-206ENST00000504003 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
ARHGEF28-206ENST00000504003 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF28-206ENST00000504003 AMPHP49418 695 aa12.3□□□□□ -0.44
ARHGEF28-206ENST00000504003 MTHFSP49914 203 aa12.3□□□□□ -0.44
ARHGEF28-206ENST00000504003 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
ARHGEF28-206ENST00000504003 DDX17Q92841 729 aaKnown RBP12.3□□□□□ -0.44
ARHGEF28-206ENST00000504003 GCP02774 474 aa12.28□□□□□ -0.44
ARHGEF28-206ENST00000504003 TMC2Q8TDI7 906 aa12.28□□□□□ -0.44
ARHGEF28-206ENST00000504003 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
ARHGEF28-206ENST00000504003 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
ARHGEF28-206ENST00000504003 KIF3CO14782 793 aa12.27□□□□□ -0.45
ARHGEF28-206ENST00000504003 POLKQ9UBT6 870 aa12.27□□□□□ -0.45
ARHGEF28-206ENST00000504003 USP19O94966 1318 aa12.27□□□□□ -0.45
ARHGEF28-206ENST00000504003 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
ARHGEF28-206ENST00000504003 SLIT3O75094 1523 aa12.27□□□□□ -0.45
ARHGEF28-206ENST00000504003 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF28-206ENST00000504003 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
ARHGEF28-206ENST00000504003 NEFMP07197 916 aa12.26□□□□□ -0.45
ARHGEF28-206ENST00000504003 FLT4P35916 1363 aa12.26□□□□□ -0.45
ARHGEF28-206ENST00000504003 CDK12Q9NYV4 1490 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF28-206ENST00000504003 PTGER2P43116 358 aa12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 RRS1Q15050 365 aaKnown RBP12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 FAM9BQ8IZU0 186 aa12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 RNF166Q96A37 237 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 LTN1O94822 1766 aa12.25□□□□□ -0.45
ARHGEF28-206ENST00000504003 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
ARHGEF28-206ENST00000504003 INSRP06213 1382 aa12.24□□□□□ -0.45
ARHGEF28-206ENST00000504003 PHRF1Q9P1Y6 1649 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-206ENST00000504003 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
ARHGEF28-206ENST00000504003 COL16A1Q07092 1604 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF28-206ENST00000504003 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
ARHGEF28-206ENST00000504003 PNISRQ8TF01 805 aaKnown RBP12.23□□□□□ -0.45
ARHGEF28-206ENST00000504003 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 NFAT5O94916 1531 aa12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 ABCC6O95255 1503 aa12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 PNPLA6Q8IY17 1366 aa12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 JCADQ9P266 1359 aa12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 IP6K1Q92551 441 aa12.22□□□□□ -0.45
ARHGEF28-206ENST00000504003 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF28-206ENST00000504003 CPDO75976 1380 aa12.21□□□□□ -0.45
ARHGEF28-206ENST00000504003 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
ARHGEF28-206ENST00000504003 HOXC9P31274 260 aa12.21□□□□□ -0.45
ARHGEF28-206ENST00000504003 ZC3H6P61129 1189 aaKnown RBP12.21□□□□□ -0.45
ARHGEF28-206ENST00000504003 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.451e-8■■■□□ 17.3
ARHGEF28-206ENST00000504003 PRDM11Q9NQV5 511 aa12.21□□□□□ -0.45
ARHGEF28-206ENST00000504003 SHPRHQ149N8 1683 aa12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 SLC34A2O95436 690 aa12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 FBLN1P23142 703 aa12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.467e-6■■■□□ 19.2
ARHGEF28-206ENST00000504003 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
ARHGEF28-206ENST00000504003 SPATA31A6Q5VVP1 1343 aa12.19□□□□□ -0.46
ARHGEF28-206ENST00000504003 ABCA3Q99758 1704 aa12.19□□□□□ -0.46
ARHGEF28-206ENST00000504003 MAPK8IP3Q9UPT6 1336 aa12.18□□□□□ -0.46
ARHGEF28-206ENST00000504003 HSPA1LP34931 641 aa12.18□□□□□ -0.46
ARHGEF28-206ENST00000504003 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
ARHGEF28-206ENST00000504003 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms