RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 RIMS1Q86UR5 1692 aaKnown RBP23.47■■□□□ 1.35
LPCAT1-203ENST00000503252 USP35Q9P2H5 1018 aa23.46■■□□□ 1.35
LPCAT1-203ENST00000503252 CRB1P82279 1406 aa23.46■■□□□ 1.35
LPCAT1-203ENST00000503252 CHD1LQ86WJ1 897 aa23.46■■□□□ 1.35
LPCAT1-203ENST00000503252 SIRT2Q8IXJ6 389 aa23.45■■□□□ 1.34
LPCAT1-203ENST00000503252 MIS18AQ9NYP9 233 aa23.45■■□□□ 1.34
LPCAT1-203ENST00000503252 KDRP35968 1356 aa23.44■■□□□ 1.34
LPCAT1-203ENST00000503252 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
LPCAT1-203ENST00000503252 IGSF1Q8N6C5 1336 aa23.44■■□□□ 1.34
LPCAT1-203ENST00000503252 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
LPCAT1-203ENST00000503252 NFKBIBQ15653 356 aa23.42■■□□□ 1.34
LPCAT1-203ENST00000503252 ABTB2Q8N961 1025 aa23.42■■□□□ 1.34
LPCAT1-203ENST00000503252 ANKRD45Q5TZF3 282 aa23.42■■□□□ 1.34
LPCAT1-203ENST00000503252 ANKLE2Q86XL3 938 aa23.41■■□□□ 1.34
LPCAT1-203ENST00000503252 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
LPCAT1-203ENST00000503252 GCC1Q96CN9 775 aa23.41■■□□□ 1.34
LPCAT1-203ENST00000503252 HOXC9P31274 260 aa23.4■■□□□ 1.34
LPCAT1-203ENST00000503252 MARF1Q9Y4F3 1742 aaKnown RBP23.4■■□□□ 1.34
LPCAT1-203ENST00000503252 MFAP1P55081 439 aaKnown RBP23.4■■□□□ 1.34
LPCAT1-203ENST00000503252 HAP1P54257 671 aaPredicted RBP23.39■■□□□ 1.34
LPCAT1-203ENST00000503252 BECN1Q14457 450 aa23.39■■□□□ 1.34
LPCAT1-203ENST00000503252 RGS12O14924 1447 aa23.39■■□□□ 1.34
LPCAT1-203ENST00000503252 INTS3Q68E01 1043 aaKnown RBP23.38■■□□□ 1.33
LPCAT1-203ENST00000503252 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
LPCAT1-203ENST00000503252 TSPYL4Q9UJ04 414 aa23.38■■□□□ 1.33
LPCAT1-203ENST00000503252 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
LPCAT1-203ENST00000503252 PHF8Q9UPP1 1060 aa23.37■■□□□ 1.33
LPCAT1-203ENST00000503252 KIF24Q5T7B8 1368 aa23.37■■□□□ 1.33
LPCAT1-203ENST00000503252 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
LPCAT1-203ENST00000503252 CHD2O14647 1828 aaKnown RBP23.36■■□□□ 1.33
LPCAT1-203ENST00000503252 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
LPCAT1-203ENST00000503252 SLC4A2P04920 1241 aa23.35■■□□□ 1.33
LPCAT1-203ENST00000503252 TBC1D2Q9BYX2 928 aa23.33■■□□□ 1.33
LPCAT1-203ENST00000503252 NWD1Q149M9 1564 aa23.33■■□□□ 1.33
LPCAT1-203ENST00000503252 PTPRCP08575 1304 aa23.33■■□□□ 1.32
LPCAT1-203ENST00000503252 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
LPCAT1-203ENST00000503252 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
LPCAT1-203ENST00000503252 MSH6P52701 1360 aa23.31■■□□□ 1.32
LPCAT1-203ENST00000503252 G2E3Q7L622 706 aa23.31■■□□□ 1.32
LPCAT1-203ENST00000503252 SLKQ9H2G2 1235 aaPredicted RBP23.3■■□□□ 1.32
LPCAT1-203ENST00000503252 GNAT3A8MTJ3 354 aa23.3■■□□□ 1.32
LPCAT1-203ENST00000503252 FRAT2O75474 233 aaPredicted RBP23.29■■□□□ 1.32
LPCAT1-203ENST00000503252 USHBP1Q8N6Y0 703 aa23.29■■□□□ 1.32
LPCAT1-203ENST00000503252 ZNF142P52746 1687 aaPredicted RBP23.29■■□□□ 1.32
LPCAT1-203ENST00000503252 HTATSF1O43719 755 aaKnown RBP23.29■■□□□ 1.32
LPCAT1-203ENST00000503252 ESCO1Q5FWF5 840 aa23.29■■□□□ 1.32
LPCAT1-203ENST00000503252 ATP10DQ9P241 1426 aa23.28■■□□□ 1.32
LPCAT1-203ENST00000503252 MEIS3Q99687 375 aa23.28■■□□□ 1.32
LPCAT1-203ENST00000503252 DCTPP1Q9H773 170 aa23.28■■□□□ 1.32
LPCAT1-203ENST00000503252 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
LPCAT1-203ENST00000503252 IL17REQ8NFR9 667 aa23.27■■□□□ 1.32
LPCAT1-203ENST00000503252 F6X3S4 739 aa23.26■■□□□ 1.31
LPCAT1-203ENST00000503252 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
LPCAT1-203ENST00000503252 PSME1Q06323 249 aa23.26■■□□□ 1.31
LPCAT1-203ENST00000503252 CEP85Q6P2H3 762 aa23.26■■□□□ 1.31
LPCAT1-203ENST00000503252 ADGRL3Q9HAR2 1447 aa23.26■■□□□ 1.31
LPCAT1-203ENST00000503252 ZMYND15Q9H091 742 aa23.25■■□□□ 1.31
LPCAT1-203ENST00000503252 ANTXR1Q9H6X2 564 aa23.25■■□□□ 1.31
LPCAT1-203ENST00000503252 LRRC37A3O60309 1634 aa23.25■■□□□ 1.31
LPCAT1-203ENST00000503252 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
LPCAT1-203ENST00000503252 SLC4A10Q6U841 1118 aa23.25■■□□□ 1.31
LPCAT1-203ENST00000503252 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
LPCAT1-203ENST00000503252 LTN1O94822 1766 aa23.24■■□□□ 1.31
LPCAT1-203ENST00000503252 ADAMTSL3P82987 1691 aa23.24■■□□□ 1.31
LPCAT1-203ENST00000503252 IP6K1Q92551 441 aa23.24■■□□□ 1.31
LPCAT1-203ENST00000503252 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
LPCAT1-203ENST00000503252 NECTIN2Q92692 538 aa23.22■■□□□ 1.31
LPCAT1-203ENST00000503252 NFAT5O94916 1531 aa23.22■■□□□ 1.31
LPCAT1-203ENST00000503252 PLEKHM2Q8IWE5 1019 aa23.22■■□□□ 1.31
LPCAT1-203ENST00000503252 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
LPCAT1-203ENST00000503252 SPRYD3Q8NCJ5 442 aa23.22■■□□□ 1.31
LPCAT1-203ENST00000503252 TBC1D9Q6ZT07 1266 aa23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 STK31Q9BXU1 1019 aa23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 RBM25P49756 843 aaKnown RBP23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
LPCAT1-203ENST00000503252 GSPT1P15170 499 aaKnown RBP23.2■■□□□ 1.3
LPCAT1-203ENST00000503252 TAF7Q15545 349 aaPredicted RBP23.2■■□□□ 1.3
LPCAT1-203ENST00000503252 GLIPR1L2Q4G1C9 344 aa23.2■■□□□ 1.3
LPCAT1-203ENST00000503252 ORAI2Q96SN7 254 aa23.2■■□□□ 1.3
LPCAT1-203ENST00000503252 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
LPCAT1-203ENST00000503252 CCT4P50991 539 aaKnown RBP23.18■■□□□ 1.3
LPCAT1-203ENST00000503252 CCDC30Q5VVM6 783 aa23.18■■□□□ 1.3
LPCAT1-203ENST00000503252 APBB1O00213 710 aa23.18■■□□□ 1.3
LPCAT1-203ENST00000503252 FLIIQ13045 1269 aa23.17■■□□□ 1.3
LPCAT1-203ENST00000503252 OTUD7AQ8TE49 926 aaPredicted RBP23.17■■□□□ 1.3
LPCAT1-203ENST00000503252 SMARCA5O60264 1052 aaPredicted RBP23.16■■□□□ 1.3
LPCAT1-203ENST00000503252 FKBP5Q13451 457 aaPredicted RBP23.16■■□□□ 1.3
LPCAT1-203ENST00000503252 KCNH5Q8NCM2 988 aa23.16■■□□□ 1.3
LPCAT1-203ENST00000503252 GSE1Q14687 1217 aa23.16■■□□□ 1.3
LPCAT1-203ENST00000503252 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
LPCAT1-203ENST00000503252 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
LPCAT1-203ENST00000503252 FAM208AQ9UK61 1670 aaKnown RBP23.15■■□□□ 1.3
LPCAT1-203ENST00000503252 CDC45O75419 566 aa23.14■■□□□ 1.29
LPCAT1-203ENST00000503252 TTC22Q5TAA0 569 aa23.14■■□□□ 1.29
LPCAT1-203ENST00000503252 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.29
LPCAT1-203ENST00000503252 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
LPCAT1-203ENST00000503252 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms