RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
SFXN1-204ENST00000502865 E9PSI1 815 aa12.75□□□□□ -0.37
SFXN1-204ENST00000502865 MEGF6O75095 1541 aa12.75□□□□□ -0.37
SFXN1-204ENST00000502865 NRAPQ86VF7 1730 aa12.75□□□□□ -0.37
SFXN1-204ENST00000502865 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
SFXN1-204ENST00000502865 LRP6O75581 1613 aa12.74□□□□□ -0.37
SFXN1-204ENST00000502865 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
SFXN1-204ENST00000502865 MCM10Q7L590 875 aa12.74□□□□□ -0.37
SFXN1-204ENST00000502865 CARD10Q9BWT7 1032 aa12.74□□□□□ -0.37
SFXN1-204ENST00000502865 IL16Q14005 1332 aa12.73□□□□□ -0.37
SFXN1-204ENST00000502865 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
SFXN1-204ENST00000502865 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
SFXN1-204ENST00000502865 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
SFXN1-204ENST00000502865 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
SFXN1-204ENST00000502865 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
SFXN1-204ENST00000502865 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
SFXN1-204ENST00000502865 ZNF853P0CG23 659 aa12.72□□□□□ -0.37
SFXN1-204ENST00000502865 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
SFXN1-204ENST00000502865 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
SFXN1-204ENST00000502865 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
SFXN1-204ENST00000502865 SLIT2O94813 1529 aa12.72□□□□□ -0.37
SFXN1-204ENST00000502865 CRB1P82279 1406 aa12.71□□□□□ -0.37
SFXN1-204ENST00000502865 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.37
SFXN1-204ENST00000502865 MAP3K5Q99683 1374 aa12.71□□□□□ -0.37
SFXN1-204ENST00000502865 HTATSF1O43719 755 aaKnown RBP12.71□□□□□ -0.37
SFXN1-204ENST00000502865 ZNF530Q6P9A1 599 aaPredicted RBP12.71□□□□□ -0.37
SFXN1-204ENST00000502865 LGR6Q9HBX8 967 aa12.71□□□□□ -0.37
SFXN1-204ENST00000502865 LAS1LQ9Y4W2 734 aaKnown RBP12.71□□□□□ -0.37
SFXN1-204ENST00000502865 VIRMAQ69YN4 1812 aaKnown RBP12.71□□□□□ -0.38
SFXN1-204ENST00000502865 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.38
SFXN1-204ENST00000502865 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
SFXN1-204ENST00000502865 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
SFXN1-204ENST00000502865 RTF1Q92541 710 aaKnown RBP12.7□□□□□ -0.38
SFXN1-204ENST00000502865 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
SFXN1-204ENST00000502865 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
SFXN1-204ENST00000502865 OVOS2A0A0G2JMS6 1433 aa12.7□□□□□ -0.38
SFXN1-204ENST00000502865 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
SFXN1-204ENST00000502865 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
SFXN1-204ENST00000502865 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
SFXN1-204ENST00000502865 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
SFXN1-204ENST00000502865 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
SFXN1-204ENST00000502865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.38
SFXN1-204ENST00000502865 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
SFXN1-204ENST00000502865 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 CYP27B1O15528 508 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 IL2RBP14784 551 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 GNAI1P63096 354 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
SFXN1-204ENST00000502865 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
SFXN1-204ENST00000502865 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
SFXN1-204ENST00000502865 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 CHL1O00533 1208 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
SFXN1-204ENST00000502865 PHKG2P15735 406 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
SFXN1-204ENST00000502865 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
SFXN1-204ENST00000502865 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 DISP2A7MBM2 1401 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
SFXN1-204ENST00000502865 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
SFXN1-204ENST00000502865 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
SFXN1-204ENST00000502865 UNC5CLQ8IV45 518 aa12.66□□□□□ -0.38
SFXN1-204ENST00000502865 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
SFXN1-204ENST00000502865 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
SFXN1-204ENST00000502865 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
SFXN1-204ENST00000502865 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
SFXN1-204ENST00000502865 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
SFXN1-204ENST00000502865 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-204ENST00000502865 SIPA1L3O60292 1781 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-204ENST00000502865 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-204ENST00000502865 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
SFXN1-204ENST00000502865 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
SFXN1-204ENST00000502865 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.63□□□□□ -0.39
SFXN1-204ENST00000502865 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-204ENST00000502865 VPS72Q15906 364 aa12.63□□□□□ -0.39
SFXN1-204ENST00000502865 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
SFXN1-204ENST00000502865 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
SFXN1-204ENST00000502865 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
SFXN1-204ENST00000502865 USP21Q9UK80 565 aa12.63□□□□□ -0.39
SFXN1-204ENST00000502865 CCDC9Q9Y3X0 531 aaKnown RBP12.63□□□□□ -0.39
SFXN1-204ENST00000502865 ELL2O00472 640 aaPredicted RBP12.62□□□□□ -0.39
SFXN1-204ENST00000502865 BCAR3O75815 825 aa12.62□□□□□ -0.39
SFXN1-204ENST00000502865 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
SFXN1-204ENST00000502865 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
SFXN1-204ENST00000502865 THRAP3Q9Y2W1 955 aaKnown RBP12.62□□□□□ -0.39
SFXN1-204ENST00000502865 AFF2P51816 1311 aa12.62□□□□□ -0.39
SFXN1-204ENST00000502865 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
SFXN1-204ENST00000502865 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
SFXN1-204ENST00000502865 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
SFXN1-204ENST00000502865 KCNQ3O43525 872 aa12.61□□□□□ -0.39
SFXN1-204ENST00000502865 PLIN1O60240 522 aa12.61□□□□□ -0.39
SFXN1-204ENST00000502865 VAMP4O75379 141 aa12.61□□□□□ -0.39
SFXN1-204ENST00000502865 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms