RNA–Protein interactions for RNA: ENST00000501704.3

TSC22D1-211, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 4,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-211ENST00000501704 USP48Q86UV5 1035 aa18.09■□□□□ 0.49
TSC22D1-211ENST00000501704 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
TSC22D1-211ENST00000501704 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
TSC22D1-211ENST00000501704 IGSF3O75054 1194 aa18.08■□□□□ 0.49
TSC22D1-211ENST00000501704 DMTNQ08495 405 aa18.08■□□□□ 0.49
TSC22D1-211ENST00000501704 UVSSAQ2YD98 709 aa18.08■□□□□ 0.49
TSC22D1-211ENST00000501704 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.49
TSC22D1-211ENST00000501704 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.49
TSC22D1-211ENST00000501704 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.48
TSC22D1-211ENST00000501704 LETM1O95202 739 aaPredicted RBP18.08■□□□□ 0.48
TSC22D1-211ENST00000501704 CCDC183Q5T5S1 534 aa18.08■□□□□ 0.48
TSC22D1-211ENST00000501704 ADGRL1O94910 1474 aa18.08■□□□□ 0.48
TSC22D1-211ENST00000501704 GOLGA6L4A6NEF3 574 aa18.07■□□□□ 0.48
TSC22D1-211ENST00000501704 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
TSC22D1-211ENST00000501704 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
TSC22D1-211ENST00000501704 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
TSC22D1-211ENST00000501704 GTPBP4Q9BZE4 634 aaKnown RBP18.06■□□□□ 0.48
TSC22D1-211ENST00000501704 FAM83GA6ND36 823 aa18.06■□□□□ 0.48
TSC22D1-211ENST00000501704 EXOC6BQ9Y2D4 811 aa18.06■□□□□ 0.48
TSC22D1-211ENST00000501704 BRD1O95696 1058 aa18.05■□□□□ 0.48
TSC22D1-211ENST00000501704 PRAM1Q96QH2 718 aa18.05■□□□□ 0.48
TSC22D1-211ENST00000501704 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
TSC22D1-211ENST00000501704 SMC3Q9UQE7 1217 aa18.05■□□□□ 0.48
TSC22D1-211ENST00000501704 ABCC4O15439 1325 aa18.05■□□□□ 0.48
TSC22D1-211ENST00000501704 ZNF592Q92610 1267 aa18.04■□□□□ 0.48
TSC22D1-211ENST00000501704 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 CEP85Q6P2H3 762 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 MEIS3Q99687 375 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 TPM3P06753 285 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 UTP14CQ5TAP6 766 aaKnown RBP18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 MYOM2P54296 1465 aa18.03■□□□□ 0.48
TSC22D1-211ENST00000501704 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
TSC22D1-211ENST00000501704 PDE1AP54750 535 aa18.02■□□□□ 0.48
TSC22D1-211ENST00000501704 BRPF1P55201 1214 aaPredicted RBP18.02■□□□□ 0.48
TSC22D1-211ENST00000501704 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
TSC22D1-211ENST00000501704 SLC4A2P04920 1241 aa18.02■□□□□ 0.47
TSC22D1-211ENST00000501704 GIMAP6Q6P9H5 292 aa18.02■□□□□ 0.47
TSC22D1-211ENST00000501704 VPS37CA5D8V6 355 aaPredicted RBP18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 RPGRIP1LQ68CZ1 1315 aa18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 LARP6Q9BRS8 491 aaKnown RBP18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 MX1P20591 662 aa18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.475e-7■■■■□ 20.7
TSC22D1-211ENST00000501704 CDK19Q9BWU1 502 aa18.01■□□□□ 0.47
TSC22D1-211ENST00000501704 ESYT1Q9BSJ8 1104 aa18■□□□□ 0.47
TSC22D1-211ENST00000501704 CFAP65Q6ZU64 1925 aaKnown RBP18■□□□□ 0.47
TSC22D1-211ENST00000501704 RIOK3O14730 519 aaKnown RBP18■□□□□ 0.47
TSC22D1-211ENST00000501704 SOX12O15370 315 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 KDM4AO75164 1064 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 KIF20AO95235 890 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 KCNJ4P48050 445 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 KRT24Q2M2I5 525 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.99■□□□□ 0.47
TSC22D1-211ENST00000501704 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
TSC22D1-211ENST00000501704 CGNQ9P2M7 1197 aaKnown RBP17.98■□□□□ 0.47
TSC22D1-211ENST00000501704 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
TSC22D1-211ENST00000501704 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
TSC22D1-211ENST00000501704 UBE2HP62256 183 aa17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 F6X3S4 739 aa17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 MAP4K4O95819 1239 aaPredicted RBP17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 GNAI2P04899 355 aa17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 TRIM5Q9C035 493 aa17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 SRCIN1Q9C0H9 1055 aa17.97■□□□□ 0.47
TSC22D1-211ENST00000501704 C16orf45Q96MC5 204 aaPredicted RBP17.96■□□□□ 0.47
TSC22D1-211ENST00000501704 COG3Q96JB2 828 aa17.96■□□□□ 0.47
TSC22D1-211ENST00000501704 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
TSC22D1-211ENST00000501704 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 OS9Q13438 667 aaPredicted RBP17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 RRS1Q15050 365 aaKnown RBP17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 TPD52L1Q16890 204 aaPredicted RBP17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 ZNF710Q8N1W2 664 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 NECTIN2Q92692 538 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 BBXQ8WY36 941 aaPredicted RBP17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 KIF1BO60333 1816 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 STX6O43752 255 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 ZSCAN22P10073 491 aaPredicted RBP17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
TSC22D1-211ENST00000501704 ANAPC15P60006 121 aa17.94■□□□□ 0.46
TSC22D1-211ENST00000501704 CAMK4Q16566 473 aa17.94■□□□□ 0.46
TSC22D1-211ENST00000501704 MCM10Q7L590 875 aa17.94■□□□□ 0.46
TSC22D1-211ENST00000501704 IL1RAPL2Q9NP60 686 aa17.94■□□□□ 0.46
TSC22D1-211ENST00000501704 TET3O43151 1660 aa17.93■□□□□ 0.46
TSC22D1-211ENST00000501704 SHROOM2Q13796 1616 aa17.93■□□□□ 0.46
TSC22D1-211ENST00000501704 MSH6P52701 1360 aa17.93■□□□□ 0.46
TSC22D1-211ENST00000501704 MED14O60244 1454 aa17.93■□□□□ 0.46
TSC22D1-211ENST00000501704 CUL4AQ13619 759 aa17.93■□□□□ 0.46
TSC22D1-211ENST00000501704 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
TSC22D1-211ENST00000501704 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
TSC22D1-211ENST00000501704 PYCARDQ9ULZ3 195 aa17.92■□□□□ 0.46
TSC22D1-211ENST00000501704 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms