RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ARHGEF28Q8N1W1 1705 aaKnown RBP11.32□□□□□ -0.6
FN1-227ENST00000498719 IRF6O14896 467 aa11.32□□□□□ -0.6
FN1-227ENST00000498719 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
FN1-227ENST00000498719 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
FN1-227ENST00000498719 RUNDC1Q96C34 613 aa11.32□□□□□ -0.6
FN1-227ENST00000498719 REPIN1Q9BWE0 567 aaKnown RBP11.32□□□□□ -0.6
FN1-227ENST00000498719 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
FN1-227ENST00000498719 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 FAM43BQ6ZT52 329 aaPredicted RBP11.31□□□□□ -0.6
FN1-227ENST00000498719 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 STK26Q9P289 416 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 VRTNQ9H8Y1 702 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 MYO5BQ9ULV0 1848 aa11.31□□□□□ -0.6
FN1-227ENST00000498719 IDI1Q13907 227 aa11.3□□□□□ -0.6
FN1-227ENST00000498719 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
FN1-227ENST00000498719 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
FN1-227ENST00000498719 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
FN1-227ENST00000498719 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
FN1-227ENST00000498719 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
FN1-227ENST00000498719 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 RLBP1P12271 317 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
FN1-227ENST00000498719 EVC2Q86UK5 1308 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 PIK3C2BO00750 1634 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
FN1-227ENST00000498719 PDE3AQ14432 1141 aa11.29□□□□□ -0.6
FN1-227ENST00000498719 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
FN1-227ENST00000498719 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
FN1-227ENST00000498719 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
FN1-227ENST00000498719 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
FN1-227ENST00000498719 GIPC2Q8TF65 315 aa11.28□□□□□ -0.6
FN1-227ENST00000498719 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
FN1-227ENST00000498719 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
FN1-227ENST00000498719 PTMSP20962 102 aa11.28□□□□□ -0.6
FN1-227ENST00000498719 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
FN1-227ENST00000498719 MAP2K5Q13163 448 aa11.27□□□□□ -0.6
FN1-227ENST00000498719 GGNBP2Q9H3C7 697 aa11.27□□□□□ -0.6
FN1-227ENST00000498719 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
FN1-227ENST00000498719 YEATS2Q9ULM3 1422 aa11.27□□□□□ -0.61
FN1-227ENST00000498719 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
FN1-227ENST00000498719 PARNO95453 639 aaKnown RBP11.26□□□□□ -0.61
FN1-227ENST00000498719 DNAJC2Q99543 621 aaKnown RBP11.26□□□□□ -0.61
FN1-227ENST00000498719 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
FN1-227ENST00000498719 FECHP22830 423 aa11.26□□□□□ -0.61
FN1-227ENST00000498719 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
FN1-227ENST00000498719 TERF2IPQ9NYB0 399 aa11.26□□□□□ -0.61
FN1-227ENST00000498719 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
FN1-227ENST00000498719 SEC24BO95487 1268 aa11.25□□□□□ -0.61
FN1-227ENST00000498719 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
FN1-227ENST00000498719 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
FN1-227ENST00000498719 GNEQ9Y223 722 aaKnown RBP11.25□□□□□ -0.61
FN1-227ENST00000498719 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
FN1-227ENST00000498719 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
FN1-227ENST00000498719 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
FN1-227ENST00000498719 RICTORQ6R327 1708 aa11.24□□□□□ -0.61
FN1-227ENST00000498719 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
FN1-227ENST00000498719 NME8Q8N427 588 aa11.24□□□□□ -0.61
FN1-227ENST00000498719 ADAMTS19Q8TE59 1207 aa11.24□□□□□ -0.61
FN1-227ENST00000498719 NEO1Q92859 1461 aa11.23□□□□□ -0.61
FN1-227ENST00000498719 PRAM1Q96QH2 718 aa11.23□□□□□ -0.61
FN1-227ENST00000498719 NINLQ9Y2I6 1382 aa11.23□□□□□ -0.61
FN1-227ENST00000498719 USP19O94966 1318 aa11.23□□□□□ -0.61
FN1-227ENST00000498719 NFKBIBQ15653 356 aa11.23□□□□□ -0.61
FN1-227ENST00000498719 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
FN1-227ENST00000498719 ABCC11Q96J66 1382 aa11.22□□□□□ -0.61
FN1-227ENST00000498719 FYB1O15117 783 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 PYGBP11216 843 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 FBLN1P23142 703 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 PREX1Q8TCU6 1659 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 NSD2O96028 1365 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 PTPRMP28827 1452 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 ARHGAP31Q2M1Z3 1444 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 POGKQ9P215 609 aa11.21□□□□□ -0.61
FN1-227ENST00000498719 TMEM131LA2VDJ0 1609 aa11.21□□□□□ -0.62
FN1-227ENST00000498719 ADGRB2O60241 1585 aa11.21□□□□□ -0.62
FN1-227ENST00000498719 TAGLNQ01995 201 aaKnown RBP11.2□□□□□ -0.62
FN1-227ENST00000498719 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
FN1-227ENST00000498719 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
FN1-227ENST00000498719 TRIM35Q9UPQ4 493 aa11.2□□□□□ -0.62
FN1-227ENST00000498719 CD163L1Q9NR16 1453 aa11.2□□□□□ -0.62
FN1-227ENST00000498719 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
FN1-227ENST00000498719 EXOSC9Q06265 439 aaKnown RBP11.19□□□□□ -0.62
FN1-227ENST00000498719 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
FN1-227ENST00000498719 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
FN1-227ENST00000498719 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
FN1-227ENST00000498719 PPFIA4O75335 1185 aa11.19□□□□□ -0.62
FN1-227ENST00000498719 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
FN1-227ENST00000498719 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
FN1-227ENST00000498719 YTHDC2Q9H6S0 1430 aaKnown RBP11.19□□□□□ -0.62
FN1-227ENST00000498719 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
FN1-227ENST00000498719 RECKO95980 971 aa11.18□□□□□ -0.62
FN1-227ENST00000498719 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms