RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 STRN4Q9NRL3 753 aa9.2□□□□□ -0.94
GPATCH4-209ENST00000498641 RNF123Q5XPI4 1314 aa9.2□□□□□ -0.94
GPATCH4-209ENST00000498641 NUTM2BA6NNL0 878 aaPredicted RBP9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 NUTM2EB1AL46 878 aaPredicted RBP9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 C1orf141Q5JVX7 400 aa9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 NUTM2AQ8IVF1 878 aaPredicted RBP9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 CFAP44Q96MT7 982 aa9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 MAP3K5Q99683 1374 aa9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 ABCC6O95255 1503 aa9.19□□□□□ -0.94
GPATCH4-209ENST00000498641 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 CT47B1P0C2W7 299 aaPredicted RBP9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 CANXP27824 592 aaKnown RBP9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 AKAP4Q5JQC9 854 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 BTG4Q9NY30 223 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 SPG7Q9UQ90 795 aa9.18□□□□□ -0.94
GPATCH4-209ENST00000498641 PLIN1O60240 522 aa9.17□□□□□ -0.94
GPATCH4-209ENST00000498641 BCAR3O75815 825 aa9.17□□□□□ -0.94
GPATCH4-209ENST00000498641 RARSP54136 660 aaKnown RBP9.17□□□□□ -0.94
GPATCH4-209ENST00000498641 PHLPP1O60346 1717 aa9.17□□□□□ -0.94
GPATCH4-209ENST00000498641 CRYBG1Q9Y4K1 1723 aa9.17□□□□□ -0.94
GPATCH4-209ENST00000498641 NCAPD2Q15021 1401 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 CHL1O00533 1208 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 LARP1Q6PKG0 1096 aaKnown RBP9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 MPRIPQ6WCQ1 1025 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 IL17REQ8NFR9 667 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 CARD10Q9BWT7 1032 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 TSPYL4Q9UJ04 414 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 CAMTA1Q9Y6Y1 1673 aa9.16□□□□□ -0.94
GPATCH4-209ENST00000498641 COL5A2P05997 1499 aaPredicted RBP9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 CRB1P82279 1406 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 COL18A1P39060 1754 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 ELL2O00472 640 aaPredicted RBP9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 TEFQ10587 303 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 FRAT1Q92837 279 aaPredicted RBP9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 BCL2L13Q9BXK5 485 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 LGR6Q9HBX8 967 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 USP35Q9P2H5 1018 aa9.15□□□□□ -0.94
GPATCH4-209ENST00000498641 COL16A1Q07092 1604 aaPredicted RBP9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 IL2RBP14784 551 aa9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 TWISTNBQ3B726 338 aaPredicted RBP9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 IFNL2Q8IZJ0 200 aa9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 C8orf58Q8NAV2 365 aa9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 ZCRB1Q8TBF4 217 aaKnown RBP9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 PPP4R2Q9NY27 417 aa9.14□□□□□ -0.95
GPATCH4-209ENST00000498641 JCADQ9P266 1359 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 VAMP4O75379 141 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 PHKG2P15735 406 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 ALDH1L2Q3SY69 923 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 SSH1Q8WYL5 1049 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 ZNF428Q96B54 188 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 ABCA3Q99758 1704 aa9.13□□□□□ -0.95
GPATCH4-209ENST00000498641 RGPD2P0DJD1 1756 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 MEGF6O75095 1541 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 HSP90AB1P08238 724 aaKnown RBP9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 C20orf194Q5TEA3 1177 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 EXOC6Q8TAG9 804 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 LMO7Q8WWI1 1683 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 CEMIPQ8WUJ3 1361 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 PLEKHG2Q9H7P9 1386 aa9.12□□□□□ -0.95
GPATCH4-209ENST00000498641 PCDH11XQ9BZA7 1347 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 PCDH11YQ9BZA8 1340 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 FAM208AQ9UK61 1670 aaKnown RBP9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 IPO8O15397 1037 aaKnown RBP9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 MS4A1P11836 297 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 HSPA1LP34931 641 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 KRT24Q2M2I5 525 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 ZKSCAN2Q63HK3 967 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 DCAF5Q96JK2 942 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 C8orf37Q96NL8 207 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 CRBNQ96SW2 442 aa9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 COL14A1Q05707 1796 aaKnown RBP9.11□□□□□ -0.95
GPATCH4-209ENST00000498641 SPATA31A6Q5VVP1 1343 aa9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 DLG5Q8TDM6 1919 aa9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 TCERG1O14776 1098 aaKnown RBP9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 CYP27B1O15528 508 aa9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 CABP4P57796 275 aa9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 MEX3CQ5U5Q3 659 aaKnown RBP9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 FTSJ3Q8IY81 847 aaKnown RBP9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 NOB1Q9ULX3 412 aaKnown RBP9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 OVOS2A0A0G2JMS6 1433 aa9.1□□□□□ -0.95
GPATCH4-209ENST00000498641 KIF16BQ96L93 1317 aa9.09□□□□□ -0.95
GPATCH4-209ENST00000498641 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms