RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
PUM1-212ENST00000498627 SLIT2O94813 1529 aa11.05□□□□□ -0.64
PUM1-212ENST00000498627 CAMTA1Q9Y6Y1 1673 aa11.05□□□□□ -0.64
PUM1-212ENST00000498627 EVA1CP58658 441 aa11.05□□□□□ -0.64
PUM1-212ENST00000498627 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
PUM1-212ENST00000498627 POLKQ9UBT6 870 aa11.05□□□□□ -0.64
PUM1-212ENST00000498627 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
PUM1-212ENST00000498627 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
PUM1-212ENST00000498627 USP54Q70EL1 1684 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 HOXC9P31274 260 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 IP6K1Q92551 441 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 USP35Q9P2H5 1018 aa11.04□□□□□ -0.64
PUM1-212ENST00000498627 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
PUM1-212ENST00000498627 COL18A1P39060 1754 aa11.03□□□□□ -0.64
PUM1-212ENST00000498627 MAP2P11137 1827 aaKnown RBP11.03□□□□□ -0.64
PUM1-212ENST00000498627 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
PUM1-212ENST00000498627 PLCH1Q4KWH8 1693 aa11.03□□□□□ -0.64
PUM1-212ENST00000498627 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.03□□□□□ -0.64
PUM1-212ENST00000498627 LTN1O94822 1766 aa11.03□□□□□ -0.64
PUM1-212ENST00000498627 COL14A1Q05707 1796 aaKnown RBP11.03□□□□□ -0.64
PUM1-212ENST00000498627 NSD2O96028 1365 aa11.03□□□□□ -0.64
PUM1-212ENST00000498627 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
PUM1-212ENST00000498627 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
PUM1-212ENST00000498627 ANKRD24Q8TF21 1146 aa11.02□□□□□ -0.65
PUM1-212ENST00000498627 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
PUM1-212ENST00000498627 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
PUM1-212ENST00000498627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
PUM1-212ENST00000498627 MTHFSP49914 203 aa11.01□□□□□ -0.65
PUM1-212ENST00000498627 VPS72Q15906 364 aa11.01□□□□□ -0.65
PUM1-212ENST00000498627 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
PUM1-212ENST00000498627 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
PUM1-212ENST00000498627 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
PUM1-212ENST00000498627 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
PUM1-212ENST00000498627 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
PUM1-212ENST00000498627 TOM1L2Q6ZVM7 507 aa11□□□□□ -0.65
PUM1-212ENST00000498627 USHBP1Q8N6Y0 703 aa11□□□□□ -0.65
PUM1-212ENST00000498627 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
PUM1-212ENST00000498627 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
PUM1-212ENST00000498627 COL5A2P05997 1499 aaPredicted RBP11□□□□□ -0.65
PUM1-212ENST00000498627 NRAPQ86VF7 1730 aa10.99□□□□□ -0.65
PUM1-212ENST00000498627 PPP2R1AP30153 589 aa10.99□□□□□ -0.65
PUM1-212ENST00000498627 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
PUM1-212ENST00000498627 KRT27Q7Z3Y8 459 aa10.99□□□□□ -0.65
PUM1-212ENST00000498627 SPATA31A5Q5VU36 1347 aa10.99□□□□□ -0.65
PUM1-212ENST00000498627 SPATA31A7Q8IWB4 1347 aa10.99□□□□□ -0.65
PUM1-212ENST00000498627 NWD2Q9ULI1 1742 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
PUM1-212ENST00000498627 STK25O00506 426 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 NBPF6Q5VWK0 638 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 NBPF4Q96M43 638 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 ERBB3P21860 1342 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 SPATA31A1Q5TZJ5 1347 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 WDR17Q8IZU2 1322 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 FLT4P35916 1363 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 EP400Q96L91 3159 aa10.98□□□□□ -0.65
PUM1-212ENST00000498627 EIF4A2Q14240 407 aaKnown RBP10.97□□□□□ -0.65
PUM1-212ENST00000498627 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
PUM1-212ENST00000498627 PARD3Q8TEW0 1356 aa10.97□□□□□ -0.65
PUM1-212ENST00000498627 RGPD2P0DJD1 1756 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 GLI3P10071 1580 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 RTL1A6NKG5 1358 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 INSRP06213 1382 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 A0A0G2JS52 829 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 PSEN1P49768 467 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 MYT1Q01538 1121 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 TCP11L2Q8N4U5 519 aa10.96□□□□□ -0.65
PUM1-212ENST00000498627 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.65
PUM1-212ENST00000498627 PRKRIP1Q9H875 184 aaPredicted RBP10.96□□□□□ -0.65
PUM1-212ENST00000498627 DISP2A7MBM2 1401 aa10.95□□□□□ -0.66
PUM1-212ENST00000498627 CRB1P82279 1406 aa10.95□□□□□ -0.66
PUM1-212ENST00000498627 RALBP1Q15311 655 aa10.95□□□□□ -0.66
PUM1-212ENST00000498627 EYA1Q99502 592 aa10.95□□□□□ -0.66
PUM1-212ENST00000498627 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
PUM1-212ENST00000498627 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
PUM1-212ENST00000498627 IL13P35225 146 aa10.94□□□□□ -0.66
PUM1-212ENST00000498627 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
PUM1-212ENST00000498627 TRPC6Q9Y210 931 aa10.94□□□□□ -0.66
PUM1-212ENST00000498627 STK24Q9Y6E0 443 aa10.94□□□□□ -0.66
PUM1-212ENST00000498627 SMG6Q86US8 1419 aaKnown RBP10.93□□□□□ -0.66
PUM1-212ENST00000498627 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
PUM1-212ENST00000498627 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
PUM1-212ENST00000498627 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
PUM1-212ENST00000498627 CLCN6P51797 869 aa10.93□□□□□ -0.66
PUM1-212ENST00000498627 R3HDM1Q15032 1099 aaKnown RBP10.93□□□□□ -0.66
PUM1-212ENST00000498627 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
PUM1-212ENST00000498627 AEBP1Q8IUX7 1158 aa10.93□□□□□ -0.66
PUM1-212ENST00000498627 DIAPH1O60610 1272 aaKnown RBP10.92□□□□□ -0.66
PUM1-212ENST00000498627 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
PUM1-212ENST00000498627 BRWD3Q6RI45 1802 aa10.92□□□□□ -0.66
PUM1-212ENST00000498627 ABCC6O95255 1503 aa10.92□□□□□ -0.66
PUM1-212ENST00000498627 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
PUM1-212ENST00000498627 MYBBP1AQ9BQG0 1328 aaKnown RBP10.91□□□□□ -0.66
PUM1-212ENST00000498627 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
PUM1-212ENST00000498627 ANP32CO43423 234 aa10.91□□□□□ -0.66
PUM1-212ENST00000498627 HMOX1P09601 288 aa10.91□□□□□ -0.66
PUM1-212ENST00000498627 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
PUM1-212ENST00000498627 IL2RBP14784 551 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms