RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 SULT6B1Q6IMI4 303 aa23.59■■□□□ 1.37
ECHDC2-220ENST00000498544 VIRMAQ69YN4 1812 aaKnown RBP23.58■■□□□ 1.37
ECHDC2-220ENST00000498544 SBF2Q86WG5 1849 aa23.58■■□□□ 1.37
ECHDC2-220ENST00000498544 EP400Q96L91 3159 aa23.58■■□□□ 1.36
ECHDC2-220ENST00000498544 AEBP1Q8IUX7 1158 aa23.57■■□□□ 1.36
ECHDC2-220ENST00000498544 KRT27Q7Z3Y8 459 aa23.56■■□□□ 1.36
ECHDC2-220ENST00000498544 EXOC5O00471 708 aa23.55■■□□□ 1.36
ECHDC2-220ENST00000498544 HMOX1P09601 288 aa23.54■■□□□ 1.36
ECHDC2-220ENST00000498544 U2AF1L5P0DN76 240 aaPredicted RBP23.54■■□□□ 1.36
ECHDC2-220ENST00000498544 U2AF1Q01081 240 aaKnown RBP eCLIP23.54■■□□□ 1.36
ECHDC2-220ENST00000498544 PDE3BQ13370 1112 aa23.54■■□□□ 1.36
ECHDC2-220ENST00000498544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.54■■□□□ 1.364e-7■□□□□ 10.6
ECHDC2-220ENST00000498544 ZCRB1Q8TBF4 217 aaKnown RBP23.52■■□□□ 1.36
ECHDC2-220ENST00000498544 DOT1LQ8TEK3 1739 aa23.52■■□□□ 1.36
ECHDC2-220ENST00000498544 PCDH11XQ9BZA7 1347 aa23.52■■□□□ 1.36
ECHDC2-220ENST00000498544 PCDH11YQ9BZA8 1340 aa23.52■■□□□ 1.36
ECHDC2-220ENST00000498544 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
ECHDC2-220ENST00000498544 KAT6BQ8WYB5 2073 aa23.5■■□□□ 1.35
ECHDC2-220ENST00000498544 FCHSD2O94868 740 aa23.5■■□□□ 1.35
ECHDC2-220ENST00000498544 RSPH6AQ9H0K4 717 aa23.5■■□□□ 1.35
ECHDC2-220ENST00000498544 DLG5Q8TDM6 1919 aa23.5■■□□□ 1.35
ECHDC2-220ENST00000498544 BCL9O00512 1426 aa23.5■■□□□ 1.35
ECHDC2-220ENST00000498544 NHSQ6T4R5 1651 aa23.49■■□□□ 1.35
ECHDC2-220ENST00000498544 WDR43Q15061 677 aaKnown RBP eCLIP23.49■■□□□ 1.35
ECHDC2-220ENST00000498544 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
ECHDC2-220ENST00000498544 MRS2Q9HD23 443 aa23.49■■□□□ 1.35
ECHDC2-220ENST00000498544 TOGARAM1Q9Y4F4 1720 aa23.48■■□□□ 1.35
ECHDC2-220ENST00000498544 SCN11AQ9UI33 1791 aa23.48■■□□□ 1.35
ECHDC2-220ENST00000498544 TNS1Q9HBL0 1735 aaKnown RBP23.47■■□□□ 1.35
ECHDC2-220ENST00000498544 CCDC184Q52MB2 194 aa23.47■■□□□ 1.35
ECHDC2-220ENST00000498544 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
ECHDC2-220ENST00000498544 MARCH10Q8NA82 808 aaPredicted RBP23.47■■□□□ 1.35
ECHDC2-220ENST00000498544 ITGB4P16144 1822 aa23.47■■□□□ 1.35
ECHDC2-220ENST00000498544 PRKAR2BP31323 418 aa23.46■■□□□ 1.35
ECHDC2-220ENST00000498544 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
ECHDC2-220ENST00000498544 ADAMTS7Q9UKP4 1686 aa23.44■■□□□ 1.34
ECHDC2-220ENST00000498544 FAM196AQ6ZSG2 479 aa23.44■■□□□ 1.34
ECHDC2-220ENST00000498544 DDX54Q8TDD1 881 aaKnown RBP23.44■■□□□ 1.34
ECHDC2-220ENST00000498544 CCER2I3L3R5 266 aa23.43■■□□□ 1.34
ECHDC2-220ENST00000498544 CYP27B1O15528 508 aa23.43■■□□□ 1.34
ECHDC2-220ENST00000498544 FAM182BQ5T319 152 aa23.42■■□□□ 1.34
ECHDC2-220ENST00000498544 ZNF530Q6P9A1 599 aaPredicted RBP23.42■■□□□ 1.34
ECHDC2-220ENST00000498544 BTAF1O14981 1849 aa23.41■■□□□ 1.34
ECHDC2-220ENST00000498544 NEFMP07197 916 aa23.41■■□□□ 1.34
ECHDC2-220ENST00000498544 IFNL2Q8IZJ0 200 aa23.41■■□□□ 1.34
ECHDC2-220ENST00000498544 PHKG2P15735 406 aa23.4■■□□□ 1.34
ECHDC2-220ENST00000498544 C1orf141Q5JVX7 400 aa23.4■■□□□ 1.34
ECHDC2-220ENST00000498544 PNISRQ8TF01 805 aaKnown RBP23.4■■□□□ 1.34
ECHDC2-220ENST00000498544 PLEKHF1Q96S99 279 aa23.4■■□□□ 1.34
ECHDC2-220ENST00000498544 ADAMTS8Q9UP79 889 aa23.4■■□□□ 1.34
ECHDC2-220ENST00000498544 NKX1-1Q15270 411 aaPredicted RBP23.39■■□□□ 1.33
ECHDC2-220ENST00000498544 GAS2L2Q8NHY3 880 aa23.39■■□□□ 1.33
ECHDC2-220ENST00000498544 PHACTR3Q96KR7 559 aa23.39■■□□□ 1.33
ECHDC2-220ENST00000498544 RGPD3A6NKT7 1758 aaPredicted RBP23.39■■□□□ 1.33
ECHDC2-220ENST00000498544 RGPD4Q7Z3J3 1758 aa23.39■■□□□ 1.33
ECHDC2-220ENST00000498544 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
ECHDC2-220ENST00000498544 MTHFSDQ2M296 383 aaKnown RBP23.38■■□□□ 1.33
ECHDC2-220ENST00000498544 UPF1Q92900 1129 aaKnown RBP eCLIP23.38■■□□□ 1.33
ECHDC2-220ENST00000498544 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
ECHDC2-220ENST00000498544 AKAP4Q5JQC9 854 aa23.37■■□□□ 1.33
ECHDC2-220ENST00000498544 MIER1Q8N108 512 aa23.37■■□□□ 1.33
ECHDC2-220ENST00000498544 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
ECHDC2-220ENST00000498544 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
ECHDC2-220ENST00000498544 KDM6AO15550 1401 aaPredicted RBP23.35■■□□□ 1.33
ECHDC2-220ENST00000498544 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
ECHDC2-220ENST00000498544 RUNDC1Q96C34 613 aa23.34■■□□□ 1.33
ECHDC2-220ENST00000498544 MRC1P22897 1456 aa23.34■■□□□ 1.33
ECHDC2-220ENST00000498544 GNAT3A8MTJ3 354 aa23.31■■□□□ 1.32
ECHDC2-220ENST00000498544 CCDC125Q86Z20 511 aa23.31■■□□□ 1.32
ECHDC2-220ENST00000498544 CCDC146Q8IYE0 955 aa23.31■■□□□ 1.32
ECHDC2-220ENST00000498544 TRIM37O94972 964 aa23.3■■□□□ 1.32
ECHDC2-220ENST00000498544 NFE2L2Q16236 605 aa23.3■■□□□ 1.32
ECHDC2-220ENST00000498544 BCL11BQ9C0K0 894 aaPredicted RBP23.3■■□□□ 1.32
ECHDC2-220ENST00000498544 LY75O60449 1722 aa23.3■■□□□ 1.32
ECHDC2-220ENST00000498544 PAPPAQ13219 1627 aa23.3■■□□□ 1.32
ECHDC2-220ENST00000498544 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
ECHDC2-220ENST00000498544 ERVV-2B6SEH9 535 aa23.28■■□□□ 1.32
ECHDC2-220ENST00000498544 MPRIPQ6WCQ1 1025 aa23.28■■□□□ 1.32
ECHDC2-220ENST00000498544 HTATSF1O43719 755 aaKnown RBP23.27■■□□□ 1.32
ECHDC2-220ENST00000498544 FAM9BQ8IZU0 186 aa23.27■■□□□ 1.32
ECHDC2-220ENST00000498544 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.31
ECHDC2-220ENST00000498544 KCNQ2O43526 872 aa23.26■■□□□ 1.31
ECHDC2-220ENST00000498544 PRIM1P49642 420 aaKnown RBP23.26■■□□□ 1.31
ECHDC2-220ENST00000498544 SF3B2Q13435 895 aaKnown RBP23.26■■□□□ 1.31
ECHDC2-220ENST00000498544 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
ECHDC2-220ENST00000498544 RREB1Q92766 1687 aa23.25■■□□□ 1.31
ECHDC2-220ENST00000498544 TMPOP42166 694 aaKnown RBP23.25■■□□□ 1.31
ECHDC2-220ENST00000498544 RTF1Q92541 710 aaKnown RBP23.25■■□□□ 1.31
ECHDC2-220ENST00000498544 UBR2Q8IWV8 1755 aa23.24■■□□□ 1.31
ECHDC2-220ENST00000498544 RNMTO43148 476 aaKnown RBP23.24■■□□□ 1.31
ECHDC2-220ENST00000498544 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
ECHDC2-220ENST00000498544 LMOD3Q0VAK6 560 aa23.23■■□□□ 1.31
ECHDC2-220ENST00000498544 RIPK4P57078 832 aa23.22■■□□□ 1.31
ECHDC2-220ENST00000498544 PTF1AQ7RTS3 328 aa23.22■■□□□ 1.31
ECHDC2-220ENST00000498544 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
ECHDC2-220ENST00000498544 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
ECHDC2-220ENST00000498544 APAF1O14727 1248 aa23.21■■□□□ 1.31
ECHDC2-220ENST00000498544 CABP4P57796 275 aa23.21■■□□□ 1.31
ECHDC2-220ENST00000498544 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
ECHDC2-220ENST00000498544 SLC52A2Q9HAB3 445 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms