RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 NISCHQ9Y2I1 1504 aa42.29■■■■■ 4.36
ECHDC2-220ENST00000498544 CCDC180Q9P1Z9 1646 aa37.6■■■■□ 3.61
ECHDC2-220ENST00000498544 ABCC9O60706 1549 aa36.18■■■■□ 3.38
ECHDC2-220ENST00000498544 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
ECHDC2-220ENST00000498544 NACADO15069 1562 aa35.15■■■■□ 3.22
ECHDC2-220ENST00000498544 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
ECHDC2-220ENST00000498544 MYO15BQ96JP2 1530 aa35.09■■■■□ 3.21
ECHDC2-220ENST00000498544 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
ECHDC2-220ENST00000498544 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
ECHDC2-220ENST00000498544 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
ECHDC2-220ENST00000498544 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
ECHDC2-220ENST00000498544 BICRAQ9NZM4 1560 aa34■■■■□ 3.03
ECHDC2-220ENST00000498544 SHROOM4Q9ULL8 1493 aa33.76■■■□□ 2.99
ECHDC2-220ENST00000498544 PABPN1Q86U42 306 aaKnown RBP eCLIP33.75■■■□□ 2.997e-7■□□□□ 10.8
ECHDC2-220ENST00000498544 EIF4G1Q04637 1599 aaKnown RBP33.07■■■□□ 2.88
ECHDC2-220ENST00000498544 DNAJC5BQ9UF47 199 aa32.98■■■□□ 2.87
ECHDC2-220ENST00000498544 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
ECHDC2-220ENST00000498544 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
ECHDC2-220ENST00000498544 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
ECHDC2-220ENST00000498544 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
ECHDC2-220ENST00000498544 MROH2BQ7Z745 1585 aa32.57■■■□□ 2.8
ECHDC2-220ENST00000498544 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
ECHDC2-220ENST00000498544 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
ECHDC2-220ENST00000498544 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
ECHDC2-220ENST00000498544 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
ECHDC2-220ENST00000498544 HMGXB3Q12766 1538 aa32.33■■■□□ 2.77
ECHDC2-220ENST00000498544 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
ECHDC2-220ENST00000498544 WIZO95785 1651 aa32.31■■■□□ 2.76
ECHDC2-220ENST00000498544 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
ECHDC2-220ENST00000498544 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
ECHDC2-220ENST00000498544 SUPT5HO00267 1087 aaKnown RBP31.66■■■□□ 2.66
ECHDC2-220ENST00000498544 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
ECHDC2-220ENST00000498544 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
ECHDC2-220ENST00000498544 NESP48681 1621 aa31.42■■■□□ 2.62
ECHDC2-220ENST00000498544 PRDM2Q13029 1718 aa31.39■■■□□ 2.62
ECHDC2-220ENST00000498544 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
ECHDC2-220ENST00000498544 CFTRP13569 1480 aa31.33■■■□□ 2.61
ECHDC2-220ENST00000498544 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
ECHDC2-220ENST00000498544 PDS5BQ9NTI5 1447 aa31.21■■■□□ 2.59
ECHDC2-220ENST00000498544 DNAJC5Q9H3Z4 198 aa31.18■■■□□ 2.58
ECHDC2-220ENST00000498544 ERCC6Q03468 1493 aa31.18■■■□□ 2.58
ECHDC2-220ENST00000498544 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
ECHDC2-220ENST00000498544 CEP164Q9UPV0 1460 aa31.03■■■□□ 2.56
ECHDC2-220ENST00000498544 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
ECHDC2-220ENST00000498544 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.54
ECHDC2-220ENST00000498544 WDR62O43379 1518 aa30.83■■■□□ 2.53
ECHDC2-220ENST00000498544 CUX2O14529 1486 aa30.76■■■□□ 2.51
ECHDC2-220ENST00000498544 URB2Q14146 1524 aaKnown RBP30.74■■■□□ 2.51
ECHDC2-220ENST00000498544 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
ECHDC2-220ENST00000498544 ABCC8Q09428 1581 aa30.69■■■□□ 2.5
ECHDC2-220ENST00000498544 TOPBP1Q92547 1522 aa30.64■■■□□ 2.5
ECHDC2-220ENST00000498544 CUX1P39880 1505 aa30.56■■■□□ 2.48
ECHDC2-220ENST00000498544 BIVM-ERCC5R4GMW8 1640 aa30.5■■■□□ 2.47
ECHDC2-220ENST00000498544 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
ECHDC2-220ENST00000498544 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
ECHDC2-220ENST00000498544 SYNJ1O43426 1573 aa30.45■■■□□ 2.46
ECHDC2-220ENST00000498544 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
ECHDC2-220ENST00000498544 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
ECHDC2-220ENST00000498544 IFT140Q96RY7 1462 aa30.35■■■□□ 2.45
ECHDC2-220ENST00000498544 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
ECHDC2-220ENST00000498544 WDR97A6NE52 1622 aa30.26■■■□□ 2.44
ECHDC2-220ENST00000498544 SOGA1O94964 1423 aa30.22■■■□□ 2.43
ECHDC2-220ENST00000498544 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
ECHDC2-220ENST00000498544 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
ECHDC2-220ENST00000498544 ZNF608Q9ULD9 1512 aaPredicted RBP30.13■■■□□ 2.41
ECHDC2-220ENST00000498544 ABCA10Q8WWZ4 1543 aa30.12■■■□□ 2.41
ECHDC2-220ENST00000498544 ABCA5Q8WWZ7 1642 aa30.05■■■□□ 2.4
ECHDC2-220ENST00000498544 PBRM1Q86U86 1689 aa30■■■□□ 2.39
ECHDC2-220ENST00000498544 AQRO60306 1485 aaKnown RBP eCLIP29.98■■■□□ 2.393e-6■■■■□ 20.3
ECHDC2-220ENST00000498544 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
ECHDC2-220ENST00000498544 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
ECHDC2-220ENST00000498544 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
ECHDC2-220ENST00000498544 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
ECHDC2-220ENST00000498544 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
ECHDC2-220ENST00000498544 KIF27Q86VH2 1401 aa29.81■■■□□ 2.36
ECHDC2-220ENST00000498544 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
ECHDC2-220ENST00000498544 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
ECHDC2-220ENST00000498544 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
ECHDC2-220ENST00000498544 CHD1O14646 1710 aa29.75■■■□□ 2.35
ECHDC2-220ENST00000498544 ADAMTS12P58397 1594 aa29.72■■■□□ 2.35
ECHDC2-220ENST00000498544 CUL7Q14999 1698 aa29.69■■■□□ 2.34
ECHDC2-220ENST00000498544 SYNJ2O15056 1496 aa29.66■■■□□ 2.34
ECHDC2-220ENST00000498544 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
ECHDC2-220ENST00000498544 FHAD1B1AJZ9 1412 aa29.59■■■□□ 2.33
ECHDC2-220ENST00000498544 IGF1RP08069 1367 aa29.57■■■□□ 2.32
ECHDC2-220ENST00000498544 EEA1Q15075 1411 aa29.54■■■□□ 2.32
ECHDC2-220ENST00000498544 GRIN2AQ12879 1464 aa29.51■■■□□ 2.31
ECHDC2-220ENST00000498544 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
ECHDC2-220ENST00000498544 FBLN2P98095 1184 aa29.47■■■□□ 2.31
ECHDC2-220ENST00000498544 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
ECHDC2-220ENST00000498544 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
ECHDC2-220ENST00000498544 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
ECHDC2-220ENST00000498544 CLASP1Q7Z460 1538 aa29.36■■■□□ 2.29
ECHDC2-220ENST00000498544 NUP160Q12769 1436 aa29.35■■■□□ 2.29
ECHDC2-220ENST00000498544 PRXQ9BXM0 1461 aa29.35■■■□□ 2.29
ECHDC2-220ENST00000498544 RAPGEF2Q9Y4G8 1499 aa29.35■■■□□ 2.29
ECHDC2-220ENST00000498544 CSRNP3Q8WYN3 585 aa29.31■■■□□ 2.28
ECHDC2-220ENST00000498544 KIF21BO75037 1637 aa29.28■■■□□ 2.28
ECHDC2-220ENST00000498544 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
ECHDC2-220ENST00000498544 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms