RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
TRAPPC12-223ENST00000497597 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
TRAPPC12-223ENST00000497597 CYP2E1P05181 493 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC12-223ENST00000497597 LUZP1Q86V48 1076 aa12.74□□□□□ -0.37
TRAPPC12-223ENST00000497597 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 SCAF11Q99590 1463 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 FOSBP53539 338 aa12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 PLA2R1Q13018 1463 aa12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
TRAPPC12-223ENST00000497597 CPA1P15085 419 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 TAF3Q5VWG9 929 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 BRD1O95696 1058 aa12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 NCBP1Q09161 790 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-223ENST00000497597 CLEC17AQ6ZS10 378 aa12.71□□□□□ -0.37
TRAPPC12-223ENST00000497597 MX1P20591 662 aa12.71□□□□□ -0.37
TRAPPC12-223ENST00000497597 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.37
TRAPPC12-223ENST00000497597 IL1RAPL2Q9NP60 686 aa12.71□□□□□ -0.37
TRAPPC12-223ENST00000497597 CCDC192P0DO97 292 aa12.71□□□□□ -0.38
TRAPPC12-223ENST00000497597 DNM1Q05193 864 aaKnown RBP12.71□□□□□ -0.38
TRAPPC12-223ENST00000497597 KRT222Q8N1A0 295 aa12.71□□□□□ -0.38
TRAPPC12-223ENST00000497597 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-223ENST00000497597 ADGRL2O95490 1459 aa12.7□□□□□ -0.38
TRAPPC12-223ENST00000497597 CCDC83Q8IWF9 413 aa12.7□□□□□ -0.38
TRAPPC12-223ENST00000497597 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
TRAPPC12-223ENST00000497597 MEIS3Q99687 375 aa12.7□□□□□ -0.38
TRAPPC12-223ENST00000497597 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-223ENST00000497597 F6X3S4 739 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 BICD2Q8TD16 824 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 FEZ1Q99689 392 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 TRPM1Q7Z4N2 1603 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 SKIDA1Q1XH10 827 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 UVSSAQ2YD98 709 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 ELF2Q15723 593 aa12.69□□□□□ -0.38
TRAPPC12-223ENST00000497597 AP5Z1O43299 807 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 VAMP4O75379 141 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 GGT6Q6P531 493 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 HMMRO75330 724 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 CCAR2Q8N163 923 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
TRAPPC12-223ENST00000497597 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 ALDH1L2Q3SY69 923 aa12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 ZNF428Q96B54 188 aa12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 CEP135Q66GS9 1140 aa12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
TRAPPC12-223ENST00000497597 BECN2A8MW95 431 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 GNAI1P63096 354 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 TNMDQ9H2S6 317 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 ABCC11Q96J66 1382 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 STX6O43752 255 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 MCM2P49736 904 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 UBE2HP62256 183 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 NUP62CLQ9H1M0 184 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 KIF13AQ9H1H9 1805 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 PTPN14Q15678 1187 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 NECAB1Q8N987 351 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
TRAPPC12-223ENST00000497597 NPC1L1Q9UHC9 1359 aa12.65□□□□□ -0.38
TRAPPC12-223ENST00000497597 OS9Q13438 667 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-223ENST00000497597 NUTM1Q86Y26 1132 aa12.65□□□□□ -0.38
TRAPPC12-223ENST00000497597 ATP6V1DQ9Y5K8 247 aa12.65□□□□□ -0.38
TRAPPC12-223ENST00000497597 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
TRAPPC12-223ENST00000497597 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
TRAPPC12-223ENST00000497597 ZSCAN22P10073 491 aaPredicted RBP12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 SYT1P21579 422 aa12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 PDE1AP54750 535 aa12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 STK3Q13188 491 aa12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 ARID5BQ14865 1188 aa12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 NEK11Q8NG66 645 aa12.65□□□□□ -0.39
TRAPPC12-223ENST00000497597 TCEANC2Q96MN5 208 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms