RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ATAD2Q6PL18 1390 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 TRAPPC8Q9Y2L5 1435 aa3.86□□□□□ -1.79
CKS1BP2-201ENST00000497342 ABCA10Q8WWZ4 1543 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 FRMPD1Q5SYB0 1578 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 POTEIP0CG38 1075 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TCF3P15923 654 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 FUT2Q10981 343 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 ECM1Q16610 540 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 MAP7D1Q3KQU3 841 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 CRTC2Q53ET0 693 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 MORN1Q5T089 497 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 COL13A1Q5TAT6 717 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TRAF7Q6Q0C0 670 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 LAPTM4BQ86VI4 370 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 SIX5Q8N196 739 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 FAM174AQ8TBP5 190 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TNIKQ9UKE5 1360 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 AKNAQ7Z591 1439 aa3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 TCOF1Q13428 1488 aaKnown RBP3.85□□□□□ -1.79
CKS1BP2-201ENST00000497342 HAX1O00165 279 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 PIK3CDO00329 1044 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 HOXB1P14653 301 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 OCLNQ16625 522 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 Q3C1V9 767 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 SWT1Q5T5J6 900 aaKnown RBP3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 ANKMY2Q8IV38 441 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 DCBLD2Q96PD2 775 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 RGS12O14924 1447 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 FAM135BQ49AJ0 1406 aa3.84□□□□□ -1.79
CKS1BP2-201ENST00000497342 PLA2R1Q13018 1463 aa3.84□□□□□ -1.8
CKS1BP2-201ENST00000497342 C6orf229H3BNL8 230 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 ACTN4O43707 911 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 NPR3P17342 541 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 PTPRNQ16849 979 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 FAM98CQ17RN3 349 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 PROX2Q3B8N5 592 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 PDXDC2PQ6P474 469 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 LARGE2Q8N3Y3 721 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 FAM200AQ8TCP9 573 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 COL26A1Q96A83 441 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 OCSTAMPQ9BR26 566 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 CEP126Q9P2H0 1117 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 MKRN1Q9UHC7 482 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 RAPGEF2Q9Y4G8 1499 aa3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZCCHC11Q5TAX3 1644 aaKnown RBP3.83□□□□□ -1.8
CKS1BP2-201ENST00000497342 BCL9LQ86UU0 1499 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 M0R2N6 131 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 RECKO95980 971 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 ATP2B4P23634 1241 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 MARSP56192 900 aaKnown RBP3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 CDCA8Q53HL2 280 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 BRICD5Q6PL45 260 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 POTEHQ6S545 545 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 TNS4Q8IZW8 715 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 THAP11Q96EK4 314 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 ASB16Q96NS5 453 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 BCL2L13Q9BXK5 485 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 CXXC1Q9P0U4 656 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 KIAA1468Q9P260 1216 aa3.82□□□□□ -1.8
CKS1BP2-201ENST00000497342 TOP2AP11388 1531 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 CCDC88BA6NC98 1476 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 NEO1Q92859 1461 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 JCADQ9P266 1359 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 BHMG1C9JSJ3 638 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 SMAPO00193 183 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZBTB7BO15156 539 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 ICMTO60725 284 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 CFHP08603 1231 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 SKIP12755 728 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZC3H6P61129 1189 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 RBM6P78332 1123 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 CLDN10P78369 228 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 MRPL58Q14197 206 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 LARP1Q6PKG0 1096 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 TRIM50Q86XT4 487 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 PLPP7Q8NBV4 271 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 SREK1Q8WXA9 508 aaKnown RBP3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 DRC1Q96MC2 740 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 LRP6O75581 1613 aa3.81□□□□□ -1.8
CKS1BP2-201ENST00000497342 FHOD3Q2V2M9 1422 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ANKRD33BA6NCL7 494 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 GIGYF1O75420 1035 aaPredicted RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 POTEJP0CG39 1038 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SERPINB4P48594 390 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SLC4A3P48751 1232 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ATP1A2P50993 1020 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 NCOA4Q13772 614 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 KMT5BQ4FZB7 885 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 MSS51Q4VC12 460 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZNF326Q5BKZ1 582 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 MEX3CQ5U5Q3 659 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 RGL4Q8IZJ4 473 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 ARMC2Q8NEN0 867 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SYMPKQ92797 1274 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 USB1Q9BQ65 265 aaKnown RBP3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 PRR14Q9BWN1 585 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SLC27A5Q9Y2P5 690 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 VWDEQ8N2E2 1590 aa3.8□□□□□ -1.8
CKS1BP2-201ENST00000497342 SPATA31A6Q5VVP1 1343 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 C21orf2O43822 256 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms