RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ERBB3P21860 1342 aa14.12□□□□□ -0.15
SRSF4-205ENST00000497015 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
SRSF4-205ENST00000497015 QSER1Q2KHR3 1735 aa14.11□□□□□ -0.15
SRSF4-205ENST00000497015 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
SRSF4-205ENST00000497015 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
SRSF4-205ENST00000497015 TUBGCP6Q96RT7 1819 aa14.11□□□□□ -0.15
SRSF4-205ENST00000497015 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
SRSF4-205ENST00000497015 NSD2O96028 1365 aa14.09□□□□□ -0.15
SRSF4-205ENST00000497015 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
SRSF4-205ENST00000497015 ANKRD24Q8TF21 1146 aa14.08□□□□□ -0.16
SRSF4-205ENST00000497015 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.16
SRSF4-205ENST00000497015 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
SRSF4-205ENST00000497015 COL13A1Q5TAT6 717 aaPredicted RBP14.07□□□□□ -0.16
SRSF4-205ENST00000497015 AMIGO3Q86WK7 504 aa14.06□□□□□ -0.16
SRSF4-205ENST00000497015 WWC3Q9ULE0 1092 aa14.06□□□□□ -0.16
SRSF4-205ENST00000497015 KIAA1210Q9ULL0 1709 aa14.06□□□□□ -0.16
SRSF4-205ENST00000497015 SMIM5Q71RC9 77 aa14.05□□□□□ -0.16
SRSF4-205ENST00000497015 NME9Q86XW9 330 aa14.05□□□□□ -0.16
SRSF4-205ENST00000497015 SYTL4Q96C24 671 aaPredicted RBP14.05□□□□□ -0.16
SRSF4-205ENST00000497015 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
SRSF4-205ENST00000497015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.04□□□□□ -0.16
SRSF4-205ENST00000497015 CCNL1Q9UK58 526 aaPredicted RBP14.04□□□□□ -0.16
SRSF4-205ENST00000497015 ANKRD36BQ8N2N9 1353 aa14.04□□□□□ -0.16
SRSF4-205ENST00000497015 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
SRSF4-205ENST00000497015 APLP1P51693 650 aa14.03□□□□□ -0.16
SRSF4-205ENST00000497015 EVC2Q86UK5 1308 aa14.03□□□□□ -0.16
SRSF4-205ENST00000497015 QRICH2Q9H0J4 1663 aa14.03□□□□□ -0.16
SRSF4-205ENST00000497015 LY75O60449 1722 aa14.03□□□□□ -0.16
SRSF4-205ENST00000497015 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
SRSF4-205ENST00000497015 HTRA3P83110 453 aa14.01□□□□□ -0.17
SRSF4-205ENST00000497015 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
SRSF4-205ENST00000497015 IGSF1Q8N6C5 1336 aa14□□□□□ -0.17
SRSF4-205ENST00000497015 CAPN15O75808 1086 aa13.99□□□□□ -0.17
SRSF4-205ENST00000497015 FBLN1P23142 703 aa13.99□□□□□ -0.17
SRSF4-205ENST00000497015 IP6K1Q92551 441 aa13.99□□□□□ -0.17
SRSF4-205ENST00000497015 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
SRSF4-205ENST00000497015 CD163L1Q9NR16 1453 aa13.99□□□□□ -0.17
SRSF4-205ENST00000497015 TOMM70O94826 608 aa13.98□□□□□ -0.17
SRSF4-205ENST00000497015 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
SRSF4-205ENST00000497015 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
SRSF4-205ENST00000497015 JMYQ8N9B5 988 aa13.97□□□□□ -0.17
SRSF4-205ENST00000497015 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
SRSF4-205ENST00000497015 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
SRSF4-205ENST00000497015 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
SRSF4-205ENST00000497015 LTN1O94822 1766 aa13.95□□□□□ -0.18
SRSF4-205ENST00000497015 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
SRSF4-205ENST00000497015 USP47Q96K76 1375 aa13.95□□□□□ -0.18
SRSF4-205ENST00000497015 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
SRSF4-205ENST00000497015 PRELPP51888 382 aa13.94□□□□□ -0.18
SRSF4-205ENST00000497015 KLRG1Q96E93 195 aa13.94□□□□□ -0.18
SRSF4-205ENST00000497015 USP54Q70EL1 1684 aa13.94□□□□□ -0.18
SRSF4-205ENST00000497015 MEGF6O75095 1541 aa13.94□□□□□ -0.18
SRSF4-205ENST00000497015 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
SRSF4-205ENST00000497015 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
SRSF4-205ENST00000497015 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
SRSF4-205ENST00000497015 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
SRSF4-205ENST00000497015 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
SRSF4-205ENST00000497015 MON2Q7Z3U7 1717 aa13.93□□□□□ -0.18
SRSF4-205ENST00000497015 HOXC9P31274 260 aa13.92□□□□□ -0.18
SRSF4-205ENST00000497015 PCNTO95613 3336 aa13.92□□□□□ -0.18
SRSF4-205ENST00000497015 FAM208AQ9UK61 1670 aaKnown RBP13.91□□□□□ -0.18
SRSF4-205ENST00000497015 PRKCSHP14314 528 aaPredicted RBP13.91□□□□□ -0.18
SRSF4-205ENST00000497015 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
SRSF4-205ENST00000497015 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.18
SRSF4-205ENST00000497015 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
SRSF4-205ENST00000497015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.18
SRSF4-205ENST00000497015 PHF14O94880 888 aa13.9□□□□□ -0.18
SRSF4-205ENST00000497015 TNS4Q8IZW8 715 aa13.9□□□□□ -0.18
SRSF4-205ENST00000497015 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.19
SRSF4-205ENST00000497015 C5P01031 1676 aa13.89□□□□□ -0.19
SRSF4-205ENST00000497015 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
SRSF4-205ENST00000497015 A0A0G2JLW4 131 aa13.89□□□□□ -0.19
SRSF4-205ENST00000497015 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
SRSF4-205ENST00000497015 USHBP1Q8N6Y0 703 aa13.89□□□□□ -0.19
SRSF4-205ENST00000497015 RBM46Q8TBY0 533 aaKnown RBP13.89□□□□□ -0.19
SRSF4-205ENST00000497015 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
SRSF4-205ENST00000497015 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
SRSF4-205ENST00000497015 TAF1LQ8IZX4 1826 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 WDR90Q96KV7 1748 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 CYP27B1O15528 508 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
SRSF4-205ENST00000497015 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
SRSF4-205ENST00000497015 KCNA3P22001 575 aa13.86□□□□□ -0.19
SRSF4-205ENST00000497015 PIGBQ92521 554 aa13.86□□□□□ -0.19
SRSF4-205ENST00000497015 AK7Q96M32 723 aa13.86□□□□□ -0.19
SRSF4-205ENST00000497015 BCS1LQ9Y276 419 aa13.86□□□□□ -0.19
SRSF4-205ENST00000497015 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
SRSF4-205ENST00000497015 KIAA1551Q9HCM1 1747 aa13.86□□□□□ -0.19
SRSF4-205ENST00000497015 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
SRSF4-205ENST00000497015 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
SRSF4-205ENST00000497015 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
SRSF4-205ENST00000497015 TIMELESSQ9UNS1 1208 aa13.85□□□□□ -0.19
SRSF4-205ENST00000497015 MMP10P09238 476 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 DPEP1P16444 411 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 SSFA2P28290 1259 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 AMPHP49418 695 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms