RNA–Protein interactions for RNA: ENST00000496238.5

POLR1B-214, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 587 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-214ENST00000496238 SLC27A3Q5K4L6 730 aa25.52■■□□□ 1.68
POLR1B-214ENST00000496238 SMG6Q86US8 1419 aaKnown RBP25.52■■□□□ 1.68
POLR1B-214ENST00000496238 DCAF8L1A6NGE4 600 aa25.51■■□□□ 1.67
POLR1B-214ENST00000496238 DOT1LQ8TEK3 1739 aa25.51■■□□□ 1.67
POLR1B-214ENST00000496238 NSD2O96028 1365 aa25.5■■□□□ 1.67
POLR1B-214ENST00000496238 INSRP06213 1382 aa25.5■■□□□ 1.67
POLR1B-214ENST00000496238 PRIM1P49642 420 aaKnown RBP25.5■■□□□ 1.67
POLR1B-214ENST00000496238 CGNL1Q0VF96 1302 aa25.5■■□□□ 1.67
POLR1B-214ENST00000496238 KIF24Q5T7B8 1368 aa25.5■■□□□ 1.67
POLR1B-214ENST00000496238 CARD14Q9BXL6 1004 aa25.5■■□□□ 1.67
POLR1B-214ENST00000496238 FLT4P35916 1363 aa25.49■■□□□ 1.67
POLR1B-214ENST00000496238 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
POLR1B-214ENST00000496238 YY1P25490 414 aa25.49■■□□□ 1.67
POLR1B-214ENST00000496238 AKT1S1Q96B36 256 aa25.49■■□□□ 1.67
POLR1B-214ENST00000496238 SYTL4Q96C24 671 aaPredicted RBP25.49■■□□□ 1.67
POLR1B-214ENST00000496238 HSP90AB2PQ58FF8 381 aa25.48■■□□□ 1.67
POLR1B-214ENST00000496238 USHBP1Q8N6Y0 703 aa25.48■■□□□ 1.67
POLR1B-214ENST00000496238 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
POLR1B-214ENST00000496238 RAPGEF4Q8WZA2 1011 aa25.46■■□□□ 1.67
POLR1B-214ENST00000496238 FHDC1Q9C0D6 1143 aaPredicted RBP25.46■■□□□ 1.67
POLR1B-214ENST00000496238 SYT17Q9BSW7 474 aa25.44■■□□□ 1.66
POLR1B-214ENST00000496238 LY75O60449 1722 aa25.43■■□□□ 1.66
POLR1B-214ENST00000496238 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
POLR1B-214ENST00000496238 TATP17735 454 aaPredicted RBP25.42■■□□□ 1.66
POLR1B-214ENST00000496238 KCNQ4P56696 695 aa25.42■■□□□ 1.66
POLR1B-214ENST00000496238 ARXQ96QS3 562 aa25.42■■□□□ 1.66
POLR1B-214ENST00000496238 SLC16A10Q8TF71 515 aa25.41■■□□□ 1.66
POLR1B-214ENST00000496238 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
POLR1B-214ENST00000496238 MAP3K5Q99683 1374 aa25.41■■□□□ 1.66
POLR1B-214ENST00000496238 PNPLA7Q6ZV29 1317 aa25.4■■□□□ 1.66
POLR1B-214ENST00000496238 PCDH11XQ9BZA7 1347 aa25.39■■□□□ 1.66
POLR1B-214ENST00000496238 PCDH11YQ9BZA8 1340 aa25.39■■□□□ 1.66
POLR1B-214ENST00000496238 PCGF6Q9BYE7 350 aa25.39■■□□□ 1.66
POLR1B-214ENST00000496238 TFCP2L1Q9NZI6 479 aa25.39■■□□□ 1.66
POLR1B-214ENST00000496238 ANKRD26Q9UPS8 1709 aa25.38■■□□□ 1.65
POLR1B-214ENST00000496238 CCNL1Q9UK58 526 aaPredicted RBP25.38■■□□□ 1.65
POLR1B-214ENST00000496238 NCAPD2Q15021 1401 aa25.37■■□□□ 1.65
POLR1B-214ENST00000496238 TUBGCP6Q96RT7 1819 aa25.37■■□□□ 1.65
POLR1B-214ENST00000496238 GOLGB1Q14789 3259 aaKnown RBP25.36■■□□□ 1.65
POLR1B-214ENST00000496238 COL24A1Q17RW2 1714 aa25.35■■□□□ 1.65
POLR1B-214ENST00000496238 CYP27B1O15528 508 aa25.34■■□□□ 1.65
POLR1B-214ENST00000496238 WASHC2AQ641Q2 1341 aa25.34■■□□□ 1.65
POLR1B-214ENST00000496238 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.65
POLR1B-214ENST00000496238 PKD1L3Q7Z443 1732 aa25.33■■□□□ 1.65
POLR1B-214ENST00000496238 POLD1P28340 1107 aa25.31■■□□□ 1.64
POLR1B-214ENST00000496238 TOGARAM1Q9Y4F4 1720 aa25.3■■□□□ 1.64
POLR1B-214ENST00000496238 POLKQ9UBT6 870 aa25.29■■□□□ 1.64
POLR1B-214ENST00000496238 PALLDQ8WX93 1383 aa25.29■■□□□ 1.64
POLR1B-214ENST00000496238 MPRIPQ6WCQ1 1025 aa25.28■■□□□ 1.64
POLR1B-214ENST00000496238 C5P01031 1676 aa25.27■■□□□ 1.64
POLR1B-214ENST00000496238 NKX1-1Q15270 411 aaPredicted RBP25.27■■□□□ 1.64
POLR1B-214ENST00000496238 EYA1Q99502 592 aa25.27■■□□□ 1.64
POLR1B-214ENST00000496238 POLR3GLQ9BT43 218 aa25.27■■□□□ 1.64
POLR1B-214ENST00000496238 MAP2P11137 1827 aaKnown RBP25.27■■□□□ 1.64
POLR1B-214ENST00000496238 EIF4G2P78344 907 aaKnown RBP eCLIP25.26■■□□□ 1.63
POLR1B-214ENST00000496238 COL23A1Q86Y22 540 aaPredicted RBP25.26■■□□□ 1.63
POLR1B-214ENST00000496238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.25■■□□□ 1.634e-7■■□□□ 11.5
POLR1B-214ENST00000496238 SPG7Q9UQ90 795 aa25.25■■□□□ 1.63
POLR1B-214ENST00000496238 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
POLR1B-214ENST00000496238 HMGB2P26583 209 aaKnown RBP25.24■■□□□ 1.63
POLR1B-214ENST00000496238 ITGB4P16144 1822 aa25.23■■□□□ 1.63
POLR1B-214ENST00000496238 SMARCC1Q92922 1105 aaPredicted RBP25.23■■□□□ 1.63
POLR1B-214ENST00000496238 TAF1LQ8IZX4 1826 aa25.22■■□□□ 1.63
POLR1B-214ENST00000496238 MSH5O43196 834 aa25.22■■□□□ 1.63
POLR1B-214ENST00000496238 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
POLR1B-214ENST00000496238 PIGBQ92521 554 aa25.22■■□□□ 1.63
POLR1B-214ENST00000496238 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
POLR1B-214ENST00000496238 EIF4A2Q14240 407 aaKnown RBP25.21■■□□□ 1.63
POLR1B-214ENST00000496238 ZNF784Q8NCA9 323 aaPredicted RBP25.2■■□□□ 1.62
POLR1B-214ENST00000496238 PLEKHG2Q9H7P9 1386 aa25.19■■□□□ 1.62
POLR1B-214ENST00000496238 GPR162Q16538 588 aa25.19■■□□□ 1.62
POLR1B-214ENST00000496238 FLAD1Q8NFF5 587 aa25.19■■□□□ 1.62
POLR1B-214ENST00000496238 NLGN2Q8NFZ4 835 aa25.19■■□□□ 1.62
POLR1B-214ENST00000496238 PANK3Q9H999 370 aa25.19■■□□□ 1.62
POLR1B-214ENST00000496238 CHD4Q14839 1912 aa25.19■■□□□ 1.62
POLR1B-214ENST00000496238 C4BP0C0L5 1744 aa25.18■■□□□ 1.62
POLR1B-214ENST00000496238 PHKG2P15735 406 aa25.17■■□□□ 1.62
POLR1B-214ENST00000496238 MSL1Q68DK7 614 aa25.17■■□□□ 1.62
POLR1B-214ENST00000496238 IFNL2Q8IZJ0 200 aa25.17■■□□□ 1.62
POLR1B-214ENST00000496238 CCER1Q8TC90 406 aaPredicted RBP25.16■■□□□ 1.62
POLR1B-214ENST00000496238 IGSF1Q8N6C5 1336 aa25.15■■□□□ 1.62
POLR1B-214ENST00000496238 TMOD3Q9NYL9 352 aa25.15■■□□□ 1.62
POLR1B-214ENST00000496238 AMIGO3Q86WK7 504 aa25.14■■□□□ 1.62
POLR1B-214ENST00000496238 AK7Q96M32 723 aa25.14■■□□□ 1.62
POLR1B-214ENST00000496238 LOC102724428A0A0B4J2F2 783 aa25.13■■□□□ 1.61
POLR1B-214ENST00000496238 SIK1P57059 783 aa25.13■■□□□ 1.61
POLR1B-214ENST00000496238 ASAP1Q9ULH1 1129 aa25.12■■□□□ 1.61
POLR1B-214ENST00000496238 UBR3Q6ZT12 1888 aa25.11■■□□□ 1.61
POLR1B-214ENST00000496238 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
POLR1B-214ENST00000496238 LINC00116Q8NCU8 138 aa25.1■■□□□ 1.61
POLR1B-214ENST00000496238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.09■■□□□ 1.61
POLR1B-214ENST00000496238 PHF14O94880 888 aa25.08■■□□□ 1.61
POLR1B-214ENST00000496238 SSFA2P28290 1259 aa25.08■■□□□ 1.61
POLR1B-214ENST00000496238 ATG3Q9NT62 314 aa25.08■■□□□ 1.61
POLR1B-214ENST00000496238 CD2APQ9Y5K6 639 aa25.08■■□□□ 1.61
POLR1B-214ENST00000496238 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.62e-6■■■□□ 15.8
POLR1B-214ENST00000496238 ITPK1Q13572 414 aa25.07■■□□□ 1.6
POLR1B-214ENST00000496238 SMIM5Q71RC9 77 aa25.07■■□□□ 1.6
POLR1B-214ENST00000496238 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
POLR1B-214ENST00000496238 ERVV-2B6SEH9 535 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms