RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 CHL1O00533 1208 aa15.01□□□□□ -0.01
HCN3-204ENST00000496230 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
HCN3-204ENST00000496230 PRAMEF22A3QJZ6 481 aa15.01□□□□□ -0.01
HCN3-204ENST00000496230 ALDH1L2Q3SY69 923 aa15.01□□□□□ -0.01
HCN3-204ENST00000496230 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
HCN3-204ENST00000496230 FLT4P35916 1363 aa15□□□□□ -0.01
HCN3-204ENST00000496230 AIMP1Q12904 312 aaKnown RBP15□□□□□ -0.01
HCN3-204ENST00000496230 TECPR2O15040 1411 aa15□□□□□ -0.01
HCN3-204ENST00000496230 KIF20BQ96Q89 1820 aa15□□□□□ -0.01
HCN3-204ENST00000496230 FER1L4A9Z1Z3 1794 aa15□□□□□ -0.01
HCN3-204ENST00000496230 ATF3P18847 181 aa15□□□□□ -0.01
HCN3-204ENST00000496230 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
HCN3-204ENST00000496230 ZNF530Q6P9A1 599 aaPredicted RBP15□□□□□ -0.01
HCN3-204ENST00000496230 STK31Q9BXU1 1019 aa15□□□□□ -0.01
HCN3-204ENST00000496230 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
HCN3-204ENST00000496230 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
HCN3-204ENST00000496230 A0A0G2JS52 829 aa14.99□□□□□ -0.01
HCN3-204ENST00000496230 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
HCN3-204ENST00000496230 RIMS1Q86UR5 1692 aaKnown RBP14.99□□□□□ -0.01
HCN3-204ENST00000496230 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
HCN3-204ENST00000496230 CT47B1P0C2W7 299 aaPredicted RBP14.99□□□□□ -0.01
HCN3-204ENST00000496230 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
HCN3-204ENST00000496230 MED14O60244 1454 aa14.98□□□□□ -0.01
HCN3-204ENST00000496230 DEKP35659 375 aaKnown RBP14.98□□□□□ -0.01
HCN3-204ENST00000496230 TEFQ10587 303 aa14.98□□□□□ -0.01
HCN3-204ENST00000496230 CDK12Q9NYV4 1490 aaPredicted RBP14.98□□□□□ -0.01
HCN3-204ENST00000496230 OVOS2A0A0J9YW53 1432 aa14.97□□□□□ -0.01
HCN3-204ENST00000496230 OVOS2Q6IE36 1432 aa14.97□□□□□ -0.01
HCN3-204ENST00000496230 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
HCN3-204ENST00000496230 JARID2Q92833 1246 aaPredicted RBP14.97□□□□□ -0.01
HCN3-204ENST00000496230 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
HCN3-204ENST00000496230 SBNO1A3KN83 1393 aa14.96□□□□□ -0.01
HCN3-204ENST00000496230 HDGFL1Q5TGJ6 251 aa14.96□□□□□ -0.01
HCN3-204ENST00000496230 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
HCN3-204ENST00000496230 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.02
HCN3-204ENST00000496230 DIP2AQ14689 1571 aa14.96□□□□□ -0.02
HCN3-204ENST00000496230 CEP170BQ9Y4F5 1589 aaPredicted RBP14.96□□□□□ -0.02
HCN3-204ENST00000496230 USP19O94966 1318 aa14.95□□□□□ -0.02
HCN3-204ENST00000496230 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
HCN3-204ENST00000496230 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
HCN3-204ENST00000496230 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
HCN3-204ENST00000496230 MSH6P52701 1360 aa14.94□□□□□ -0.02
HCN3-204ENST00000496230 KAT6BQ8WYB5 2073 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 BTBD11A6QL63 1104 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
HCN3-204ENST00000496230 FLIIQ13045 1269 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 HDAC1Q13547 482 aaPredicted RBP14.93□□□□□ -0.02
HCN3-204ENST00000496230 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
HCN3-204ENST00000496230 IL1RAPL2Q9NP60 686 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
HCN3-204ENST00000496230 MYL6BP14649 208 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 NUCB1Q02818 461 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 IP6K1Q92551 441 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 IGSF1Q8N6C5 1336 aa14.93□□□□□ -0.02
HCN3-204ENST00000496230 C1orf141Q5JVX7 400 aa14.92□□□□□ -0.02
HCN3-204ENST00000496230 SMC5Q8IY18 1101 aa14.92□□□□□ -0.02
HCN3-204ENST00000496230 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
HCN3-204ENST00000496230 STRN4Q9NRL3 753 aa14.92□□□□□ -0.02
HCN3-204ENST00000496230 CHPF2Q9P2E5 772 aa14.92□□□□□ -0.02
HCN3-204ENST00000496230 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
HCN3-204ENST00000496230 GOLGB1Q14789 3259 aaKnown RBP14.91□□□□□ -0.02
HCN3-204ENST00000496230 ITSN1Q15811 1721 aa14.91□□□□□ -0.02
HCN3-204ENST00000496230 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
HCN3-204ENST00000496230 NFKBIBQ15653 356 aa14.9□□□□□ -0.02
HCN3-204ENST00000496230 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
HCN3-204ENST00000496230 PEAK1Q9H792 1746 aa14.9□□□□□ -0.02
HCN3-204ENST00000496230 ARHGAP23Q9P227 1491 aa14.9□□□□□ -0.02
HCN3-204ENST00000496230 USP31Q70CQ4 1352 aa14.9□□□□□ -0.02
HCN3-204ENST00000496230 LRRFIP2Q9Y608 721 aaKnown RBP14.9□□□□□ -0.02
HCN3-204ENST00000496230 NPHP4O75161 1426 aaPredicted RBP14.9□□□□□ -0.02
HCN3-204ENST00000496230 PNMA6EA0A0J9YXQ4 647 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 TMEM94Q12767 1356 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 ABCC4O15439 1325 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 PI4KAP2A4QPH2 592 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
HCN3-204ENST00000496230 PI4KAP1Q8N8J0 262 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 SSH2Q76I76 1423 aa14.89□□□□□ -0.03
HCN3-204ENST00000496230 DLG5Q8TDM6 1919 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 CEP85Q6P2H3 762 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 NFATC2IPQ8NCF5 419 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
HCN3-204ENST00000496230 PIK3R4Q99570 1358 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 ANKRD26Q9UPS8 1709 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 SLIT1O75093 1534 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
HCN3-204ENST00000496230 RILPL2Q969X0 211 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 TBC1D2Q9BYX2 928 aa14.88□□□□□ -0.03
HCN3-204ENST00000496230 DTNBO60941 627 aa14.87□□□□□ -0.03
HCN3-204ENST00000496230 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
HCN3-204ENST00000496230 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
HCN3-204ENST00000496230 TRIM6-TRIM34B2RNG4 842 aa14.87□□□□□ -0.03
HCN3-204ENST00000496230 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
HCN3-204ENST00000496230 GZF1Q9H116 711 aaPredicted RBP14.87□□□□□ -0.03
HCN3-204ENST00000496230 CRB1P82279 1406 aa14.86□□□□□ -0.03
HCN3-204ENST00000496230 PTCH1Q13635 1447 aa14.86□□□□□ -0.03
HCN3-204ENST00000496230 CWF19L2Q2TBE0 894 aaKnown RBP14.86□□□□□ -0.03
HCN3-204ENST00000496230 TPRNQ4KMQ1 711 aa14.86□□□□□ -0.03
HCN3-204ENST00000496230 ARHGEF25Q86VW2 580 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms