RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
RBM28-208ENST00000495327 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
RBM28-208ENST00000495327 USHBP1Q8N6Y0 703 aa18.28■□□□□ 0.52
RBM28-208ENST00000495327 RAPGEF4Q8WZA2 1011 aa18.28■□□□□ 0.52
RBM28-208ENST00000495327 LY75O60449 1722 aa18.27■□□□□ 0.52
RBM28-208ENST00000495327 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.52
RBM28-208ENST00000495327 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
RBM28-208ENST00000495327 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.51
RBM28-208ENST00000495327 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
RBM28-208ENST00000495327 PSDA5PKW4 1024 aaPredicted RBP18.26■□□□□ 0.51
RBM28-208ENST00000495327 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
RBM28-208ENST00000495327 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
RBM28-208ENST00000495327 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
RBM28-208ENST00000495327 KCNQ2O43526 872 aa18.25■□□□□ 0.51
RBM28-208ENST00000495327 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
RBM28-208ENST00000495327 R3HDM1Q15032 1099 aaKnown RBP18.25■□□□□ 0.51
RBM28-208ENST00000495327 DDX54Q8TDD1 881 aaKnown RBP18.25■□□□□ 0.51
RBM28-208ENST00000495327 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
RBM28-208ENST00000495327 ITGB4P16144 1822 aa18.25■□□□□ 0.51
RBM28-208ENST00000495327 MORC1Q86VD1 984 aa18.24■□□□□ 0.51
RBM28-208ENST00000495327 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
RBM28-208ENST00000495327 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
RBM28-208ENST00000495327 PER1O15534 1290 aaPredicted RBP18.23■□□□□ 0.51
RBM28-208ENST00000495327 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
RBM28-208ENST00000495327 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
RBM28-208ENST00000495327 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
RBM28-208ENST00000495327 QSER1Q2KHR3 1735 aa18.22■□□□□ 0.51
RBM28-208ENST00000495327 PROM2Q8N271 834 aa18.21■□□□□ 0.51
RBM28-208ENST00000495327 EYA1Q99502 592 aa18.21■□□□□ 0.51
RBM28-208ENST00000495327 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
RBM28-208ENST00000495327 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
RBM28-208ENST00000495327 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
RBM28-208ENST00000495327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.18■□□□□ 0.59e-7■■■■□ 25.2
RBM28-208ENST00000495327 TUBGCP6Q96RT7 1819 aa18.17■□□□□ 0.5
RBM28-208ENST00000495327 CYP27B1O15528 508 aa18.17■□□□□ 0.5
RBM28-208ENST00000495327 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
RBM28-208ENST00000495327 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
RBM28-208ENST00000495327 PRIM1P49642 420 aaKnown RBP18.15■□□□□ 0.5
RBM28-208ENST00000495327 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
RBM28-208ENST00000495327 C5P01031 1676 aa18.15■□□□□ 0.5
RBM28-208ENST00000495327 KDRP35968 1356 aa18.15■□□□□ 0.5
RBM28-208ENST00000495327 NKX1-1Q15270 411 aaPredicted RBP18.13■□□□□ 0.49
RBM28-208ENST00000495327 SLC27A3Q5K4L6 730 aa18.13■□□□□ 0.49
RBM28-208ENST00000495327 COL3A1P02461 1466 aaPredicted RBP18.13■□□□□ 0.49
RBM28-208ENST00000495327 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
RBM28-208ENST00000495327 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
RBM28-208ENST00000495327 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
RBM28-208ENST00000495327 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
RBM28-208ENST00000495327 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
RBM28-208ENST00000495327 IL13P35225 146 aa18.1■□□□□ 0.49
RBM28-208ENST00000495327 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
RBM28-208ENST00000495327 COL24A1Q17RW2 1714 aa18.09■□□□□ 0.49
RBM28-208ENST00000495327 PHKG2P15735 406 aa18.09■□□□□ 0.49
RBM28-208ENST00000495327 MTHFSP49914 203 aa18.09■□□□□ 0.49
RBM28-208ENST00000495327 IFNL2Q8IZJ0 200 aa18.09■□□□□ 0.49
RBM28-208ENST00000495327 ZNF831Q5JPB2 1677 aa18.08■□□□□ 0.48
RBM28-208ENST00000495327 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
RBM28-208ENST00000495327 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
RBM28-208ENST00000495327 ZNF827Q17R98 1081 aa18.06■□□□□ 0.48
RBM28-208ENST00000495327 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
RBM28-208ENST00000495327 SPON1Q9HCB6 807 aa18.06■□□□□ 0.48
RBM28-208ENST00000495327 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
RBM28-208ENST00000495327 PLEKHO1Q53GL0 409 aaPredicted RBP18.05■□□□□ 0.48
RBM28-208ENST00000495327 SULT6B1Q6IMI4 303 aa18.05■□□□□ 0.48
RBM28-208ENST00000495327 MPRIPQ6WCQ1 1025 aa18.05■□□□□ 0.48
RBM28-208ENST00000495327 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
RBM28-208ENST00000495327 ADAMTS7Q9UKP4 1686 aa18.05■□□□□ 0.48
RBM28-208ENST00000495327 KDM6AO15550 1401 aaPredicted RBP18.05■□□□□ 0.48
RBM28-208ENST00000495327 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
RBM28-208ENST00000495327 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
RBM28-208ENST00000495327 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
RBM28-208ENST00000495327 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
RBM28-208ENST00000495327 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
RBM28-208ENST00000495327 PIGBQ92521 554 aa18.03■□□□□ 0.48
RBM28-208ENST00000495327 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
RBM28-208ENST00000495327 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
RBM28-208ENST00000495327 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
RBM28-208ENST00000495327 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
RBM28-208ENST00000495327 ZNF530Q6P9A1 599 aaPredicted RBP18.02■□□□□ 0.48
RBM28-208ENST00000495327 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
RBM28-208ENST00000495327 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.48
RBM28-208ENST00000495327 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
RBM28-208ENST00000495327 KCNQ4P56696 695 aa18■□□□□ 0.47
RBM28-208ENST00000495327 MTFR1LQ9H019 292 aa18■□□□□ 0.47
RBM28-208ENST00000495327 MRC1P22897 1456 aa18■□□□□ 0.47
RBM28-208ENST00000495327 PNPLA7Q6ZV29 1317 aa17.99■□□□□ 0.47
RBM28-208ENST00000495327 ZBTB7AO95365 584 aa17.99■□□□□ 0.47
RBM28-208ENST00000495327 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
RBM28-208ENST00000495327 PTGER2P43116 358 aa17.98■□□□□ 0.47
RBM28-208ENST00000495327 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
RBM28-208ENST00000495327 HMOX1P09601 288 aa17.97■□□□□ 0.47
RBM28-208ENST00000495327 SLC16A10Q8TF71 515 aa17.97■□□□□ 0.47
RBM28-208ENST00000495327 PPP2R1AP30153 589 aa17.96■□□□□ 0.47
RBM28-208ENST00000495327 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
RBM28-208ENST00000495327 TFCP2L1Q9NZI6 479 aa17.96■□□□□ 0.47
RBM28-208ENST00000495327 PPP1R1BQ9UD71 204 aaPredicted RBP17.96■□□□□ 0.47
RBM28-208ENST00000495327 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
RBM28-208ENST00000495327 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
RBM28-208ENST00000495327 SIK1P57059 783 aa17.95■□□□□ 0.46
RBM28-208ENST00000495327 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms