RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
APTX-230ENST00000494649 TRIM37O94972 964 aa14.94□□□□□ -0.02
APTX-230ENST00000494649 ACSBG1Q96GR2 724 aa14.94□□□□□ -0.02
APTX-230ENST00000494649 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
APTX-230ENST00000494649 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
APTX-230ENST00000494649 PTF1AQ7RTS3 328 aa14.93□□□□□ -0.02
APTX-230ENST00000494649 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
APTX-230ENST00000494649 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.022e-8■■■■■ 37
APTX-230ENST00000494649 RGPD1P0DJD0 1748 aa14.91□□□□□ -0.02
APTX-230ENST00000494649 ANP32CO43423 234 aa14.91□□□□□ -0.02
APTX-230ENST00000494649 FAM196AQ6ZSG2 479 aa14.91□□□□□ -0.02
APTX-230ENST00000494649 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
APTX-230ENST00000494649 KCNQ2O43526 872 aa14.9□□□□□ -0.02
APTX-230ENST00000494649 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
APTX-230ENST00000494649 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
APTX-230ENST00000494649 CYP27B1O15528 508 aa14.89□□□□□ -0.03
APTX-230ENST00000494649 DEFB132Q7Z7B7 95 aa14.89□□□□□ -0.03
APTX-230ENST00000494649 NUDCQ9Y266 331 aa14.89□□□□□ -0.03
APTX-230ENST00000494649 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
APTX-230ENST00000494649 KAT6BQ8WYB5 2073 aa14.89□□□□□ -0.03
APTX-230ENST00000494649 PCDH11XQ9BZA7 1347 aa14.88□□□□□ -0.03
APTX-230ENST00000494649 PCDH11YQ9BZA8 1340 aa14.88□□□□□ -0.03
APTX-230ENST00000494649 SPG7Q9UQ90 795 aa14.88□□□□□ -0.03
APTX-230ENST00000494649 KDRP35968 1356 aa14.88□□□□□ -0.03
APTX-230ENST00000494649 PRKAR2BP31323 418 aa14.88□□□□□ -0.03
APTX-230ENST00000494649 SF3B2Q13435 895 aaKnown RBP14.87□□□□□ -0.03
APTX-230ENST00000494649 ZNF530Q6P9A1 599 aaPredicted RBP14.86□□□□□ -0.03
APTX-230ENST00000494649 APBA3O96018 575 aa14.86□□□□□ -0.03
APTX-230ENST00000494649 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
APTX-230ENST00000494649 PRIM1P49642 420 aaKnown RBP14.85□□□□□ -0.03
APTX-230ENST00000494649 MTHFSDQ2M296 383 aaKnown RBP14.85□□□□□ -0.03
APTX-230ENST00000494649 PHACTR3Q96KR7 559 aa14.85□□□□□ -0.03
APTX-230ENST00000494649 RSPH6AQ9H0K4 717 aa14.85□□□□□ -0.03
APTX-230ENST00000494649 PKD1L3Q7Z443 1732 aa14.85□□□□□ -0.03
APTX-230ENST00000494649 PHKG2P15735 406 aa14.85□□□□□ -0.03
APTX-230ENST00000494649 EN1Q05925 392 aaPredicted RBP14.85□□□□□ -0.03
APTX-230ENST00000494649 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
APTX-230ENST00000494649 MPRIPQ6WCQ1 1025 aa14.83□□□□□ -0.03
APTX-230ENST00000494649 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.03
APTX-230ENST00000494649 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.04
APTX-230ENST00000494649 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.04
APTX-230ENST00000494649 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.04
APTX-230ENST00000494649 CCDC146Q8IYE0 955 aa14.83□□□□□ -0.04
APTX-230ENST00000494649 SBF2Q86WG5 1849 aa14.82□□□□□ -0.04
APTX-230ENST00000494649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■□□□□ 10.8
APTX-230ENST00000494649 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
APTX-230ENST00000494649 EZH2Q15910 746 aaKnown RBP14.81□□□□□ -0.04
APTX-230ENST00000494649 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
APTX-230ENST00000494649 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
APTX-230ENST00000494649 TNS1Q9HBL0 1735 aaKnown RBP14.81□□□□□ -0.04
APTX-230ENST00000494649 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
APTX-230ENST00000494649 FCHSD2O94868 740 aa14.8□□□□□ -0.04
APTX-230ENST00000494649 BAG6P46379 1132 aa14.8□□□□□ -0.04
APTX-230ENST00000494649 ADAMTS8Q9UP79 889 aa14.8□□□□□ -0.04
APTX-230ENST00000494649 TOGARAM1Q9Y4F4 1720 aa14.8□□□□□ -0.04
APTX-230ENST00000494649 CCDC125Q86Z20 511 aa14.8□□□□□ -0.04
APTX-230ENST00000494649 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
APTX-230ENST00000494649 KCNQ4P56696 695 aa14.79□□□□□ -0.04
APTX-230ENST00000494649 BCL9O00512 1426 aa14.78□□□□□ -0.04
APTX-230ENST00000494649 KDM6AO15550 1401 aaPredicted RBP14.78□□□□□ -0.04
APTX-230ENST00000494649 NHSQ6T4R5 1651 aa14.78□□□□□ -0.04
APTX-230ENST00000494649 PLEKHF1Q96S99 279 aa14.78□□□□□ -0.04
APTX-230ENST00000494649 NKX1-1Q15270 411 aaPredicted RBP14.77□□□□□ -0.04
APTX-230ENST00000494649 AKAP4Q5JQC9 854 aa14.77□□□□□ -0.04
APTX-230ENST00000494649 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.04
APTX-230ENST00000494649 DCTN1Q14203 1278 aa14.77□□□□□ -0.05
APTX-230ENST00000494649 NEUROD2Q15784 382 aa14.77□□□□□ -0.05
APTX-230ENST00000494649 PIGBQ92521 554 aa14.77□□□□□ -0.05
APTX-230ENST00000494649 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
APTX-230ENST00000494649 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
APTX-230ENST00000494649 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
APTX-230ENST00000494649 BTAF1O14981 1849 aa14.76□□□□□ -0.05
APTX-230ENST00000494649 NEFMP07197 916 aa14.76□□□□□ -0.05
APTX-230ENST00000494649 GAS2L2Q8NHY3 880 aa14.76□□□□□ -0.05
APTX-230ENST00000494649 MCM10Q7L590 875 aa14.75□□□□□ -0.05
APTX-230ENST00000494649 NFATC2IPQ8NCF5 419 aa14.75□□□□□ -0.05
APTX-230ENST00000494649 CAMKK2Q96RR4 588 aa14.75□□□□□ -0.05
APTX-230ENST00000494649 HSP90AB1P08238 724 aaKnown RBP14.75□□□□□ -0.05
APTX-230ENST00000494649 CABP4P57796 275 aa14.75□□□□□ -0.05
APTX-230ENST00000494649 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
APTX-230ENST00000494649 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
APTX-230ENST00000494649 ITGB4P16144 1822 aa14.74□□□□□ -0.05
APTX-230ENST00000494649 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
APTX-230ENST00000494649 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
APTX-230ENST00000494649 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
APTX-230ENST00000494649 MIER1Q8N108 512 aa14.73□□□□□ -0.05
APTX-230ENST00000494649 PROM2Q8N271 834 aa14.73□□□□□ -0.05
APTX-230ENST00000494649 IL17REQ8NFR9 667 aa14.73□□□□□ -0.05
APTX-230ENST00000494649 THUMPD2Q9BTF0 503 aaKnown RBP14.73□□□□□ -0.05
APTX-230ENST00000494649 SRCAPQ6ZRS2 3230 aa14.72□□□□□ -0.05
APTX-230ENST00000494649 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
APTX-230ENST00000494649 TXNRD1Q16881 649 aa14.72□□□□□ -0.05
APTX-230ENST00000494649 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
APTX-230ENST00000494649 PLSCR1O15162 318 aa14.72□□□□□ -0.05
APTX-230ENST00000494649 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
APTX-230ENST00000494649 ERVV-2B6SEH9 535 aa14.71□□□□□ -0.05
APTX-230ENST00000494649 SLC39A6Q13433 755 aa14.71□□□□□ -0.05
APTX-230ENST00000494649 PALLDQ8WX93 1383 aa14.71□□□□□ -0.06
APTX-230ENST00000494649 RIPK4P57078 832 aa14.7□□□□□ -0.06
APTX-230ENST00000494649 NFE2L2Q16236 605 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms