RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
TRIM59-206ENST00000494486 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
TRIM59-206ENST00000494486 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
TRIM59-206ENST00000494486 RRAGCQ9HB90 399 aa16.17■□□□□ 0.18
TRIM59-206ENST00000494486 SRPK2P78362 688 aaKnown RBP16.16■□□□□ 0.18
TRIM59-206ENST00000494486 MLLT1Q03111 559 aaPredicted RBP16.16■□□□□ 0.18
TRIM59-206ENST00000494486 BCS1LQ9Y276 419 aa16.16■□□□□ 0.18
TRIM59-206ENST00000494486 SOX12O15370 315 aa16.15■□□□□ 0.18
TRIM59-206ENST00000494486 C9orf131Q5VYM1 1079 aa16.15■□□□□ 0.18
TRIM59-206ENST00000494486 STAC3Q96MF2 364 aa16.15■□□□□ 0.18
TRIM59-206ENST00000494486 ERBB3P21860 1342 aa16.15■□□□□ 0.18
TRIM59-206ENST00000494486 TGFB2P61812 414 aa16.14■□□□□ 0.17
TRIM59-206ENST00000494486 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
TRIM59-206ENST00000494486 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
TRIM59-206ENST00000494486 NSD2O96028 1365 aa16.13■□□□□ 0.17
TRIM59-206ENST00000494486 USP47Q96K76 1375 aa16.13■□□□□ 0.17
TRIM59-206ENST00000494486 FOXN1O15353 648 aa16.12■□□□□ 0.17
TRIM59-206ENST00000494486 KAT6BQ8WYB5 2073 aa16.12■□□□□ 0.17
TRIM59-206ENST00000494486 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 LY75O60449 1722 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 RGS19P49795 217 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 ABHD8Q96I13 439 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
TRIM59-206ENST00000494486 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
TRIM59-206ENST00000494486 CTCFP49711 727 aaPredicted RBP16.1■□□□□ 0.17
TRIM59-206ENST00000494486 DCAF11Q8TEB1 546 aa16.1■□□□□ 0.17
TRIM59-206ENST00000494486 PCNTO95613 3336 aa16.09■□□□□ 0.17
TRIM59-206ENST00000494486 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
TRIM59-206ENST00000494486 FCHSD2O94868 740 aa16.08■□□□□ 0.16
TRIM59-206ENST00000494486 ANKRD24Q8TF21 1146 aa16.08■□□□□ 0.16
TRIM59-206ENST00000494486 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
TRIM59-206ENST00000494486 A0A0G2JLW4 131 aa16.07■□□□□ 0.16
TRIM59-206ENST00000494486 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
TRIM59-206ENST00000494486 AK7Q96M32 723 aa16.07■□□□□ 0.16
TRIM59-206ENST00000494486 TTC21AQ8NDW8 1320 aa16.07■□□□□ 0.16
TRIM59-206ENST00000494486 NFAT5O94916 1531 aa16.05■□□□□ 0.16
TRIM59-206ENST00000494486 NSD3Q9BZ95 1437 aa16.05■□□□□ 0.16
TRIM59-206ENST00000494486 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
TRIM59-206ENST00000494486 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
TRIM59-206ENST00000494486 RNF181Q9P0P0 153 aa16.05■□□□□ 0.16
TRIM59-206ENST00000494486 PHF14O94880 888 aa16.03■□□□□ 0.16
TRIM59-206ENST00000494486 SSFA2P28290 1259 aa16.03■□□□□ 0.16
TRIM59-206ENST00000494486 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
TRIM59-206ENST00000494486 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
TRIM59-206ENST00000494486 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
TRIM59-206ENST00000494486 MMP10P09238 476 aa16.02■□□□□ 0.16
TRIM59-206ENST00000494486 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
TRIM59-206ENST00000494486 USP54Q70EL1 1684 aa16.02■□□□□ 0.15
TRIM59-206ENST00000494486 DPEP1P16444 411 aa16.01■□□□□ 0.15
TRIM59-206ENST00000494486 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
TRIM59-206ENST00000494486 ZCRB1Q8TBF4 217 aaKnown RBP16.01■□□□□ 0.15
TRIM59-206ENST00000494486 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
TRIM59-206ENST00000494486 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
TRIM59-206ENST00000494486 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
TRIM59-206ENST00000494486 LBX1P52954 281 aa16■□□□□ 0.15
TRIM59-206ENST00000494486 C5P01031 1676 aa15.99■□□□□ 0.15
TRIM59-206ENST00000494486 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
TRIM59-206ENST00000494486 GLTPD2A6NH11 291 aa15.98■□□□□ 0.15
TRIM59-206ENST00000494486 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
TRIM59-206ENST00000494486 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
TRIM59-206ENST00000494486 QRICH2Q9H0J4 1663 aa15.98■□□□□ 0.15
TRIM59-206ENST00000494486 CENPJQ9HC77 1338 aaPredicted RBP15.97■□□□□ 0.15
TRIM59-206ENST00000494486 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
TRIM59-206ENST00000494486 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
TRIM59-206ENST00000494486 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
TRIM59-206ENST00000494486 CCDC87Q9NVE4 849 aa15.97■□□□□ 0.15
TRIM59-206ENST00000494486 WBP1LQ9NX94 342 aa15.97■□□□□ 0.15
TRIM59-206ENST00000494486 KCNA3P22001 575 aa15.96■□□□□ 0.15
TRIM59-206ENST00000494486 CNTNAP1P78357 1384 aa15.96■□□□□ 0.15
TRIM59-206ENST00000494486 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
TRIM59-206ENST00000494486 DALRD3Q5D0E6 543 aaKnown RBP15.95■□□□□ 0.14
TRIM59-206ENST00000494486 NLGN1Q8N2Q7 840 aa15.95■□□□□ 0.14
TRIM59-206ENST00000494486 USP31Q70CQ4 1352 aa15.95■□□□□ 0.14
TRIM59-206ENST00000494486 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
TRIM59-206ENST00000494486 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
TRIM59-206ENST00000494486 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
TRIM59-206ENST00000494486 N4BP2Q86UW6 1770 aaPredicted RBP15.92■□□□□ 0.14
TRIM59-206ENST00000494486 HSPA8P11142 646 aaKnown RBP15.92■□□□□ 0.14
TRIM59-206ENST00000494486 TMF1P82094 1093 aa15.92■□□□□ 0.14
TRIM59-206ENST00000494486 IP6K1Q92551 441 aa15.92■□□□□ 0.14
TRIM59-206ENST00000494486 MPRIPQ6WCQ1 1025 aa15.91■□□□□ 0.14
TRIM59-206ENST00000494486 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
TRIM59-206ENST00000494486 EVC2Q86UK5 1308 aa15.91■□□□□ 0.14
TRIM59-206ENST00000494486 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
TRIM59-206ENST00000494486 KTN1Q86UP2 1357 aaKnown RBP15.9■□□□□ 0.14
TRIM59-206ENST00000494486 VEGFBP49765 207 aa15.9■□□□□ 0.14
TRIM59-206ENST00000494486 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
TRIM59-206ENST00000494486 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
TRIM59-206ENST00000494486 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
TRIM59-206ENST00000494486 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
TRIM59-206ENST00000494486 GNPATO15228 680 aa15.89■□□□□ 0.13
TRIM59-206ENST00000494486 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
TRIM59-206ENST00000494486 POTECB2RU33 542 aa15.88■□□□□ 0.13
TRIM59-206ENST00000494486 LMNB1P20700 586 aa15.88■□□□□ 0.13
TRIM59-206ENST00000494486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRIM59-206ENST00000494486 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
TRIM59-206ENST00000494486 MAP2K1Q02750 393 aaPredicted RBP15.87■□□□□ 0.13
TRIM59-206ENST00000494486 NBPF1Q3BBV0 1214 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms