RNA–Protein interactions for RNA: ENST00000493007.1

PITPNB-210, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 3

Gene PITPNB, Length 564 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-210ENST00000493007 UPF1Q92900 1129 aaKnown RBP eCLIP12.37□□□□□ -0.43
PITPNB-210ENST00000493007 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
PITPNB-210ENST00000493007 INSRP06213 1382 aa12.36□□□□□ -0.43
PITPNB-210ENST00000493007 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
PITPNB-210ENST00000493007 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
PITPNB-210ENST00000493007 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
PITPNB-210ENST00000493007 DDB1Q16531 1140 aa12.35□□□□□ -0.43
PITPNB-210ENST00000493007 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
PITPNB-210ENST00000493007 LTN1O94822 1766 aa12.35□□□□□ -0.43
PITPNB-210ENST00000493007 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
PITPNB-210ENST00000493007 EXOC5O00471 708 aa12.34□□□□□ -0.43
PITPNB-210ENST00000493007 IL2RBP14784 551 aa12.34□□□□□ -0.43
PITPNB-210ENST00000493007 EVX2Q03828 476 aa12.34□□□□□ -0.43
PITPNB-210ENST00000493007 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
PITPNB-210ENST00000493007 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
PITPNB-210ENST00000493007 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
PITPNB-210ENST00000493007 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
PITPNB-210ENST00000493007 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
PITPNB-210ENST00000493007 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
PITPNB-210ENST00000493007 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
PITPNB-210ENST00000493007 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
PITPNB-210ENST00000493007 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
PITPNB-210ENST00000493007 USHBP1Q8N6Y0 703 aa12.32□□□□□ -0.44
PITPNB-210ENST00000493007 EP400Q96L91 3159 aa12.32□□□□□ -0.44
PITPNB-210ENST00000493007 EIF4A2Q14240 407 aaKnown RBP12.31□□□□□ -0.44
PITPNB-210ENST00000493007 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
PITPNB-210ENST00000493007 PROM2Q8N271 834 aa12.31□□□□□ -0.44
PITPNB-210ENST00000493007 PEAK1Q9H792 1746 aa12.31□□□□□ -0.44
PITPNB-210ENST00000493007 MTHFSP49914 203 aa12.3□□□□□ -0.44
PITPNB-210ENST00000493007 EYA1Q99502 592 aa12.3□□□□□ -0.44
PITPNB-210ENST00000493007 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
PITPNB-210ENST00000493007 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
PITPNB-210ENST00000493007 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
PITPNB-210ENST00000493007 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
PITPNB-210ENST00000493007 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
PITPNB-210ENST00000493007 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
PITPNB-210ENST00000493007 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
PITPNB-210ENST00000493007 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
PITPNB-210ENST00000493007 TRIM37O94972 964 aa12.27□□□□□ -0.45
PITPNB-210ENST00000493007 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
PITPNB-210ENST00000493007 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
PITPNB-210ENST00000493007 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
PITPNB-210ENST00000493007 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
PITPNB-210ENST00000493007 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
PITPNB-210ENST00000493007 IL13P35225 146 aa12.26□□□□□ -0.45
PITPNB-210ENST00000493007 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
PITPNB-210ENST00000493007 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
PITPNB-210ENST00000493007 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
PITPNB-210ENST00000493007 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
PITPNB-210ENST00000493007 MEGF6O75095 1541 aa12.25□□□□□ -0.45
PITPNB-210ENST00000493007 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
PITPNB-210ENST00000493007 DIAPH1O60610 1272 aaKnown RBP12.24□□□□□ -0.45
PITPNB-210ENST00000493007 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
PITPNB-210ENST00000493007 DEFB132Q7Z7B7 95 aa12.24□□□□□ -0.45
PITPNB-210ENST00000493007 BCL9O00512 1426 aa12.23□□□□□ -0.45
PITPNB-210ENST00000493007 APBA3O96018 575 aa12.23□□□□□ -0.45
PITPNB-210ENST00000493007 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
PITPNB-210ENST00000493007 BAG6P46379 1132 aa12.23□□□□□ -0.45
PITPNB-210ENST00000493007 FKBP8Q14318 412 aa12.23□□□□□ -0.45
PITPNB-210ENST00000493007 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
PITPNB-210ENST00000493007 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
PITPNB-210ENST00000493007 ACSBG1Q96GR2 724 aa12.22□□□□□ -0.45
PITPNB-210ENST00000493007 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
PITPNB-210ENST00000493007 SPG7Q9UQ90 795 aa12.22□□□□□ -0.45
PITPNB-210ENST00000493007 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
PITPNB-210ENST00000493007 RALBP1Q15311 655 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
PITPNB-210ENST00000493007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.458e-7■□□□□ 9.6
PITPNB-210ENST00000493007 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
PITPNB-210ENST00000493007 CYP27B1O15528 508 aa12.2□□□□□ -0.46
PITPNB-210ENST00000493007 KCNQ2O43526 872 aa12.2□□□□□ -0.46
PITPNB-210ENST00000493007 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
PITPNB-210ENST00000493007 HMOX1P09601 288 aa12.19□□□□□ -0.46
PITPNB-210ENST00000493007 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
PITPNB-210ENST00000493007 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
PITPNB-210ENST00000493007 KDRP35968 1356 aa12.18□□□□□ -0.46
PITPNB-210ENST00000493007 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
PITPNB-210ENST00000493007 AMOTQ4VCS5 1084 aa12.18□□□□□ -0.46
PITPNB-210ENST00000493007 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
PITPNB-210ENST00000493007 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
PITPNB-210ENST00000493007 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
PITPNB-210ENST00000493007 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
PITPNB-210ENST00000493007 PLSCR1O15162 318 aa12.17□□□□□ -0.46
PITPNB-210ENST00000493007 PHKG2P15735 406 aa12.17□□□□□ -0.46
PITPNB-210ENST00000493007 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
PITPNB-210ENST00000493007 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
PITPNB-210ENST00000493007 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
PITPNB-210ENST00000493007 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
PITPNB-210ENST00000493007 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
PITPNB-210ENST00000493007 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
PITPNB-210ENST00000493007 U2AF1L5P0DN76 240 aaPredicted RBP12.15□□□□□ -0.46
PITPNB-210ENST00000493007 U2AF1Q01081 240 aaKnown RBP eCLIP12.15□□□□□ -0.46
PITPNB-210ENST00000493007 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
PITPNB-210ENST00000493007 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
PITPNB-210ENST00000493007 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms