RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 TBX22Q9Y458 520 aa8.06□□□□□ -1.12
FN1-223ENST00000490833 TMEM2Q9UHN6 1383 aa8.06□□□□□ -1.12
FN1-223ENST00000490833 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
FN1-223ENST00000490833 PLEKHG3A1L390 1219 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 RIPK4P57078 832 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 NLRP6P59044 892 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 PIK3R4Q99570 1358 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 PLEKHG1Q9ULL1 1385 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 IQSEC2Q5JU85 1478 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 CDC42BPGQ6DT37 1551 aa8.05□□□□□ -1.12
FN1-223ENST00000490833 SOS1Q07889 1333 aaPredicted RBP8.04□□□□□ -1.12
FN1-223ENST00000490833 TTC21AQ8NDW8 1320 aa8.04□□□□□ -1.12
FN1-223ENST00000490833 PPIP5K1Q6PFW1 1433 aa8.04□□□□□ -1.12
FN1-223ENST00000490833 HDAC1Q13547 482 aaPredicted RBP8.04□□□□□ -1.12
FN1-223ENST00000490833 MVPQ14764 893 aaKnown RBP8.04□□□□□ -1.12
FN1-223ENST00000490833 NUDT16Q96DE0 195 aaKnown RBP8.04□□□□□ -1.12
FN1-223ENST00000490833 GGNBP2Q9H3C7 697 aa8.04□□□□□ -1.12
FN1-223ENST00000490833 ZSWIM6Q9HCJ5 1215 aa8.04□□□□□ -1.12
FN1-223ENST00000490833 KIF24Q5T7B8 1368 aa8.04□□□□□ -1.12
FN1-223ENST00000490833 TTC21BQ7Z4L5 1316 aa8.03□□□□□ -1.12
FN1-223ENST00000490833 ANKRD26Q9UPS8 1709 aa8.03□□□□□ -1.12
FN1-223ENST00000490833 BCAR3O75815 825 aa8.03□□□□□ -1.12
FN1-223ENST00000490833 SAFB2Q14151 953 aaKnown RBP eCLIP8.03□□□□□ -1.12
FN1-223ENST00000490833 NEUROD2Q15784 382 aa8.03□□□□□ -1.12
FN1-223ENST00000490833 NFE2L2Q16236 605 aa8.03□□□□□ -1.12
FN1-223ENST00000490833 NUTM2DQ5VT03 806 aaPredicted RBP8.03□□□□□ -1.12
FN1-223ENST00000490833 ATF7IPQ6VMQ6 1270 aa8.03□□□□□ -1.12
FN1-223ENST00000490833 FRAT1Q92837 279 aaPredicted RBP8.03□□□□□ -1.12
FN1-223ENST00000490833 ADGRB2O60241 1585 aa8.02□□□□□ -1.13
FN1-223ENST00000490833 STK25O00506 426 aa8.02□□□□□ -1.13
FN1-223ENST00000490833 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
FN1-223ENST00000490833 ECM2O94769 699 aaPredicted RBP8.02□□□□□ -1.13
FN1-223ENST00000490833 API5Q9BZZ5 524 aaKnown RBP8.02□□□□□ -1.13
FN1-223ENST00000490833 SMC4Q9NTJ3 1288 aa8.02□□□□□ -1.13
FN1-223ENST00000490833 POLKQ9UBT6 870 aa8.02□□□□□ -1.13
FN1-223ENST00000490833 CDK12Q9NYV4 1490 aaPredicted RBP8.01□□□□□ -1.13
FN1-223ENST00000490833 KNDC1Q76NI1 1749 aa8.01□□□□□ -1.13
FN1-223ENST00000490833 ANKRD13DQ6ZTN6 518 aa8.01□□□□□ -1.13
FN1-223ENST00000490833 TXNDC2Q86VQ3 553 aa8.01□□□□□ -1.13
FN1-223ENST00000490833 GCC1Q96CN9 775 aa8.01□□□□□ -1.13
FN1-223ENST00000490833 BABAM1Q9NWV8 329 aa8.01□□□□□ -1.13
FN1-223ENST00000490833 SHPRHQ149N8 1683 aa8.01□□□□□ -1.13
FN1-223ENST00000490833 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
FN1-223ENST00000490833 CPS1P31327 1500 aa8□□□□□ -1.13
FN1-223ENST00000490833 MLECQ14165 292 aa8□□□□□ -1.13
FN1-223ENST00000490833 ARSIQ5FYB1 569 aa8□□□□□ -1.13
FN1-223ENST00000490833 C20orf194Q5TEA3 1177 aa8□□□□□ -1.13
FN1-223ENST00000490833 RSPH6AQ9H0K4 717 aa8□□□□□ -1.13
FN1-223ENST00000490833 COG6Q9Y2V7 657 aa8□□□□□ -1.13
FN1-223ENST00000490833 DIP2AQ14689 1571 aa8□□□□□ -1.13
FN1-223ENST00000490833 IL13P35225 146 aa7.99□□□□□ -1.13
FN1-223ENST00000490833 WAPLQ7Z5K2 1190 aa7.99□□□□□ -1.13
FN1-223ENST00000490833 COL3A1P02461 1466 aaPredicted RBP7.99□□□□□ -1.13
FN1-223ENST00000490833 PTCH1Q13635 1447 aa7.98□□□□□ -1.13
FN1-223ENST00000490833 ANKARQ7Z5J8 1434 aa7.98□□□□□ -1.13
FN1-223ENST00000490833 PRKAR2BP31323 418 aa7.98□□□□□ -1.13
FN1-223ENST00000490833 EXOSC9Q06265 439 aaKnown RBP7.98□□□□□ -1.13
FN1-223ENST00000490833 GPR153Q6NV75 609 aa7.98□□□□□ -1.13
FN1-223ENST00000490833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.98□□□□□ -1.13
FN1-223ENST00000490833 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
FN1-223ENST00000490833 SLIT1O75093 1534 aa7.98□□□□□ -1.13
FN1-223ENST00000490833 METP08581 1390 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 KIAA0232Q92628 1395 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 KIF20BQ96Q89 1820 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 ZNF853P0CG23 659 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 FBXO22Q8NEZ5 403 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 RTF1Q92541 710 aaKnown RBP7.97□□□□□ -1.13
FN1-223ENST00000490833 HDAC5Q9UQL6 1122 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 TSPOAP1O95153 1857 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 RTL1A6NKG5 1358 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
FN1-223ENST00000490833 MYO5BQ9ULV0 1848 aa7.96□□□□□ -1.13
FN1-223ENST00000490833 SENP3-EIF4A1A0A087X0R7 540 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 ITPRIPQ8IWB1 547 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 SMC5Q8IY18 1101 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 GAS2L2Q8NHY3 880 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 PANK1Q8TE04 598 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 SSH1Q8WYL5 1049 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 MFRPQ9BY79 579 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 ZBTB40Q9NUA8 1239 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 NOB1Q9ULX3 412 aaKnown RBP7.96□□□□□ -1.14
FN1-223ENST00000490833 PTPRCP08575 1304 aa7.96□□□□□ -1.14
FN1-223ENST00000490833 ARHGAP23Q9P227 1491 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 TRIM27P14373 513 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 PTMSP20962 102 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 RGS3P49796 1198 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
FN1-223ENST00000490833 RPAP2Q8IXW5 612 aaPredicted RBP7.95□□□□□ -1.14
FN1-223ENST00000490833 KHSRPQ92945 711 aaKnown RBP eCLIP7.95□□□□□ -1.14
FN1-223ENST00000490833 AMOTL2Q9Y2J4 779 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 ARHGEF10O15013 1369 aa7.95□□□□□ -1.14
FN1-223ENST00000490833 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
FN1-223ENST00000490833 HMMRO75330 724 aa7.94□□□□□ -1.14
FN1-223ENST00000490833 VAMP4O75379 141 aa7.94□□□□□ -1.14
FN1-223ENST00000490833 IGHDP01880 384 aa7.94□□□□□ -1.14
FN1-223ENST00000490833 TWISTNBQ3B726 338 aaPredicted RBP7.94□□□□□ -1.14
FN1-223ENST00000490833 CASC1Q6TDU7 716 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms