RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-208ENST00000490653 EN1Q05925 392 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-208ENST00000490653 FAM98CQ17RN3 349 aaKnown RBP10.54□□□□□ -0.72
PRPF4B-208ENST00000490653 TRPM3Q9HCF6 1732 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-208ENST00000490653 TULP4Q9NRJ4 1543 aa10.53□□□□□ -0.72
PRPF4B-208ENST00000490653 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
PRPF4B-208ENST00000490653 ACEP12821 1306 aa10.53□□□□□ -0.72
PRPF4B-208ENST00000490653 NWD2Q9ULI1 1742 aa10.53□□□□□ -0.72
PRPF4B-208ENST00000490653 PPP1R37O75864 691 aa10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 BTG4Q9NY30 223 aa10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 THSD7AQ9UPZ6 1657 aa10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.73
PRPF4B-208ENST00000490653 DISP2A7MBM2 1401 aa10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 ALS2Q96Q42 1657 aa10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 ATP7BP35670 1465 aa10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 KIAA1210Q9ULL0 1709 aa10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 CRYBG1Q9Y4K1 1723 aa10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 SRPK2P78362 688 aaKnown RBP10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 R3HDM1Q15032 1099 aaKnown RBP10.51□□□□□ -0.73
PRPF4B-208ENST00000490653 TRIM26Q12899 539 aaPredicted RBP10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 CHRNA2Q15822 529 aa10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 EZH2Q15910 746 aaKnown RBP10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 CAMKK2Q96RR4 588 aa10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 CCDC9Q9Y3X0 531 aaKnown RBP10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
PRPF4B-208ENST00000490653 ZC3H6P61129 1189 aaKnown RBP10.49□□□□□ -0.73
PRPF4B-208ENST00000490653 EIF3AQ14152 1382 aaKnown RBP10.49□□□□□ -0.73
PRPF4B-208ENST00000490653 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
PRPF4B-208ENST00000490653 BAG6P46379 1132 aa10.47□□□□□ -0.73
PRPF4B-208ENST00000490653 POLR3AO14802 1390 aaPredicted RBP10.47□□□□□ -0.73
PRPF4B-208ENST00000490653 TRPM1Q7Z4N2 1603 aa10.47□□□□□ -0.73
PRPF4B-208ENST00000490653 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.73
PRPF4B-208ENST00000490653 ABTB2Q8N961 1025 aa10.46□□□□□ -0.73
PRPF4B-208ENST00000490653 SPATA31A1Q5TZJ5 1347 aa10.46□□□□□ -0.73
PRPF4B-208ENST00000490653 ROCK2O75116 1388 aaKnown RBP10.46□□□□□ -0.74
PRPF4B-208ENST00000490653 PPIP5K1Q6PFW1 1433 aa10.46□□□□□ -0.74
PRPF4B-208ENST00000490653 COL14A1Q05707 1796 aaKnown RBP10.45□□□□□ -0.74
PRPF4B-208ENST00000490653 KIAA0232Q92628 1395 aa10.45□□□□□ -0.74
PRPF4B-208ENST00000490653 PRDM11Q9NQV5 511 aa10.45□□□□□ -0.74
PRPF4B-208ENST00000490653 TOPAZ1Q8N9V7 1692 aa10.44□□□□□ -0.74
PRPF4B-208ENST00000490653 QRICH2Q9H0J4 1663 aa10.44□□□□□ -0.74
PRPF4B-208ENST00000490653 TRIM37O94972 964 aa10.44□□□□□ -0.74
PRPF4B-208ENST00000490653 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
PRPF4B-208ENST00000490653 CARD11Q9BXL7 1154 aa10.44□□□□□ -0.74
PRPF4B-208ENST00000490653 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
PRPF4B-208ENST00000490653 EVC2Q86UK5 1308 aa10.43□□□□□ -0.74
PRPF4B-208ENST00000490653 A0A0G2JS52 829 aa10.43□□□□□ -0.74
PRPF4B-208ENST00000490653 MYT1Q01538 1121 aa10.43□□□□□ -0.74
PRPF4B-208ENST00000490653 PTF1AQ7RTS3 328 aa10.43□□□□□ -0.74
PRPF4B-208ENST00000490653 ITSN1Q15811 1721 aa10.43□□□□□ -0.74
PRPF4B-208ENST00000490653 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
PRPF4B-208ENST00000490653 RGPD1P0DJD0 1748 aa10.42□□□□□ -0.74
PRPF4B-208ENST00000490653 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
PRPF4B-208ENST00000490653 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
PRPF4B-208ENST00000490653 GCP02774 474 aa10.42□□□□□ -0.74
PRPF4B-208ENST00000490653 FOXK1P85037 733 aa10.42□□□□□ -0.74
PRPF4B-208ENST00000490653 LARP1Q6PKG0 1096 aaKnown RBP10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 ADGRD1Q6QNK2 874 aa10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 NLRP13Q86W25 1043 aa10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 PDGFDQ9GZP0 370 aaPredicted RBP10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 SSH2Q76I76 1423 aa10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 RREB1Q92766 1687 aa10.41□□□□□ -0.74
PRPF4B-208ENST00000490653 TONSLQ96HA7 1378 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 USP19O94966 1318 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 EVA1CP58658 441 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 NUP188Q5SRE5 1749 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 LMO7Q8WWI1 1683 aa10.4□□□□□ -0.74
PRPF4B-208ENST00000490653 USP6P35125 1406 aa10.4□□□□□ -0.75
PRPF4B-208ENST00000490653 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.75
PRPF4B-208ENST00000490653 APBA3O96018 575 aa10.39□□□□□ -0.75
PRPF4B-208ENST00000490653 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
PRPF4B-208ENST00000490653 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
PRPF4B-208ENST00000490653 PCGF6Q9BYE7 350 aa10.39□□□□□ -0.75
PRPF4B-208ENST00000490653 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
PRPF4B-208ENST00000490653 ST20-MTHFSA0A0A6YYL1 179 aa10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 BARGINQ6ZT62 677 aa10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 TMC1Q8TDI8 760 aa10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 UTRNP46939 3433 aa10.38□□□□□ -0.75
PRPF4B-208ENST00000490653 TK2O00142 265 aa10.37□□□□□ -0.75
PRPF4B-208ENST00000490653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
PRPF4B-208ENST00000490653 TESK2Q96S53 571 aa10.37□□□□□ -0.75
PRPF4B-208ENST00000490653 HCSTQ9UBK5 93 aa10.37□□□□□ -0.75
PRPF4B-208ENST00000490653 PEAK1Q9H792 1746 aa10.36□□□□□ -0.75
PRPF4B-208ENST00000490653 CPSF1Q10570 1443 aaKnown RBP10.36□□□□□ -0.75
PRPF4B-208ENST00000490653 NME9Q86XW9 330 aa10.36□□□□□ -0.75
PRPF4B-208ENST00000490653 CPDO75976 1380 aa10.36□□□□□ -0.75
PRPF4B-208ENST00000490653 PARD3Q8TEW0 1356 aa10.36□□□□□ -0.75
PRPF4B-208ENST00000490653 ARHGEF25Q86VW2 580 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms