RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 BRWD3Q6RI45 1802 aa11.11□□□□□ -0.63
SF1-218ENST00000489544 LRRC37A3O60309 1634 aa11.1□□□□□ -0.63
SF1-218ENST00000489544 EXOC5O00471 708 aa11.1□□□□□ -0.63
SF1-218ENST00000489544 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
SF1-218ENST00000489544 MARCH10Q8NA82 808 aaPredicted RBP11.1□□□□□ -0.63
SF1-218ENST00000489544 DDX54Q8TDD1 881 aaKnown RBP11.1□□□□□ -0.63
SF1-218ENST00000489544 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.632e-19■□□□□ 9
SF1-218ENST00000489544 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
SF1-218ENST00000489544 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
SF1-218ENST00000489544 KDRP35968 1356 aa11.09□□□□□ -0.63
SF1-218ENST00000489544 ZCRB1Q8TBF4 217 aaKnown RBP11.09□□□□□ -0.63
SF1-218ENST00000489544 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
SF1-218ENST00000489544 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
SF1-218ENST00000489544 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
SF1-218ENST00000489544 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
SF1-218ENST00000489544 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.64
SF1-218ENST00000489544 CYP27B1O15528 508 aa11.07□□□□□ -0.64
SF1-218ENST00000489544 PRKAR2BP31323 418 aa11.07□□□□□ -0.64
SF1-218ENST00000489544 MIER1Q8N108 512 aa11.07□□□□□ -0.64
SF1-218ENST00000489544 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
SF1-218ENST00000489544 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
SF1-218ENST00000489544 PTF1AQ7RTS3 328 aa11.06□□□□□ -0.64
SF1-218ENST00000489544 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
SF1-218ENST00000489544 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
SF1-218ENST00000489544 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
SF1-218ENST00000489544 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
SF1-218ENST00000489544 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
SF1-218ENST00000489544 ZNF530Q6P9A1 599 aaPredicted RBP11.05□□□□□ -0.64
SF1-218ENST00000489544 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
SF1-218ENST00000489544 SHANK3Q9BYB0 1731 aa11.05□□□□□ -0.64
SF1-218ENST00000489544 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
SF1-218ENST00000489544 FCHSD2O94868 740 aa11.04□□□□□ -0.64
SF1-218ENST00000489544 PHKG2P15735 406 aa11.04□□□□□ -0.64
SF1-218ENST00000489544 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
SF1-218ENST00000489544 PCDH11XQ9BZA7 1347 aa11.04□□□□□ -0.64
SF1-218ENST00000489544 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
SF1-218ENST00000489544 KCNQ2O43526 872 aa11.03□□□□□ -0.64
SF1-218ENST00000489544 TRIM37O94972 964 aa11.03□□□□□ -0.64
SF1-218ENST00000489544 FAM196AQ6ZSG2 479 aa11.03□□□□□ -0.64
SF1-218ENST00000489544 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
SF1-218ENST00000489544 PLEKHF1Q96S99 279 aa11.03□□□□□ -0.64
SF1-218ENST00000489544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.642e-10■■■□□ 17.1
SF1-218ENST00000489544 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
SF1-218ENST00000489544 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
SF1-218ENST00000489544 MPRIPQ6WCQ1 1025 aa11.02□□□□□ -0.65
SF1-218ENST00000489544 IFNL2Q8IZJ0 200 aa11.02□□□□□ -0.65
SF1-218ENST00000489544 EP400Q96L91 3159 aa11.02□□□□□ -0.65
SF1-218ENST00000489544 PRIM1P49642 420 aaKnown RBP11.01□□□□□ -0.65
SF1-218ENST00000489544 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
SF1-218ENST00000489544 SYTL4Q96C24 671 aaPredicted RBP11.01□□□□□ -0.65
SF1-218ENST00000489544 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
SF1-218ENST00000489544 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
SF1-218ENST00000489544 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
SF1-218ENST00000489544 C1orf141Q5JVX7 400 aa11□□□□□ -0.65
SF1-218ENST00000489544 KDM6AO15550 1401 aaPredicted RBP11□□□□□ -0.65
SF1-218ENST00000489544 DCTN1Q14203 1278 aa10.99□□□□□ -0.65
SF1-218ENST00000489544 AKAP4Q5JQC9 854 aa10.99□□□□□ -0.65
SF1-218ENST00000489544 NEUROD2Q15784 382 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 DEFB132Q7Z7B7 95 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 IL17REQ8NFR9 667 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 BCL9O00512 1426 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
SF1-218ENST00000489544 CCER2I3L3R5 266 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 APAF1O14727 1248 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 RNMTO43148 476 aaKnown RBP10.97□□□□□ -0.65
SF1-218ENST00000489544 APBA3O96018 575 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 NEFMP07197 916 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 NFE2L2Q16236 605 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 MCM10Q7L590 875 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
SF1-218ENST00000489544 BCL11BQ9C0K0 894 aaPredicted RBP10.97□□□□□ -0.65
SF1-218ENST00000489544 MAP3K5Q99683 1374 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 PLEKHG2Q9H7P9 1386 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 DOT1LQ8TEK3 1739 aa10.97□□□□□ -0.65
SF1-218ENST00000489544 SBF2Q86WG5 1849 aa10.96□□□□□ -0.65
SF1-218ENST00000489544 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.65
SF1-218ENST00000489544 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.65
SF1-218ENST00000489544 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
SF1-218ENST00000489544 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
SF1-218ENST00000489544 PIGBQ92521 554 aa10.96□□□□□ -0.65
SF1-218ENST00000489544 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.65
SF1-218ENST00000489544 RIPK4P57078 832 aa10.95□□□□□ -0.66
SF1-218ENST00000489544 CABP4P57796 275 aa10.95□□□□□ -0.66
SF1-218ENST00000489544 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
SF1-218ENST00000489544 KAT6BQ8WYB5 2073 aa10.95□□□□□ -0.66
SF1-218ENST00000489544 NHSQ6T4R5 1651 aa10.95□□□□□ -0.66
SF1-218ENST00000489544 KCNQ4P56696 695 aa10.94□□□□□ -0.66
SF1-218ENST00000489544 SF3B2Q13435 895 aaKnown RBP10.94□□□□□ -0.66
SF1-218ENST00000489544 EZH2Q15910 746 aaKnown RBP10.94□□□□□ -0.66
SF1-218ENST00000489544 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
SF1-218ENST00000489544 ASAP1Q9ULH1 1129 aa10.94□□□□□ -0.66
SF1-218ENST00000489544 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
SF1-218ENST00000489544 TNS1Q9HBL0 1735 aaKnown RBP10.94□□□□□ -0.66
SF1-218ENST00000489544 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
SF1-218ENST00000489544 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
SF1-218ENST00000489544 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms