RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 MYOM1P52179 1685 aa8.39□□□□□ -1.07
SF3A3-208ENST00000489537 NALCNQ8IZF0 1738 aa8.38□□□□□ -1.07
SF3A3-208ENST00000489537 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
SF3A3-208ENST00000489537 PDE4AP27815 886 aa8.38□□□□□ -1.07
SF3A3-208ENST00000489537 LSM11P83369 360 aaKnown RBP eCLIP8.38□□□□□ -1.07
SF3A3-208ENST00000489537 C14orf37Q86TY3 774 aa8.38□□□□□ -1.07
SF3A3-208ENST00000489537 AHDC1Q5TGY3 1603 aaPredicted RBP8.38□□□□□ -1.07
SF3A3-208ENST00000489537 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
SF3A3-208ENST00000489537 NCOA3Q9Y6Q9 1424 aa8.37□□□□□ -1.07
SF3A3-208ENST00000489537 KNDC1Q76NI1 1749 aa8.37□□□□□ -1.07
SF3A3-208ENST00000489537 CARD14Q9BXL6 1004 aa8.37□□□□□ -1.07
SF3A3-208ENST00000489537 SUPT16HQ9Y5B9 1047 aaKnown RBP8.37□□□□□ -1.07
SF3A3-208ENST00000489537 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
SF3A3-208ENST00000489537 JCADQ9P266 1359 aa8.36□□□□□ -1.07
SF3A3-208ENST00000489537 MINK1Q8N4C8 1332 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-208ENST00000489537 NEFMP07197 916 aa8.36□□□□□ -1.07
SF3A3-208ENST00000489537 CNGB1Q14028 1251 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-208ENST00000489537 PPP4R3BQ5MIZ7 849 aa8.36□□□□□ -1.07
SF3A3-208ENST00000489537 EDC4Q6P2E9 1401 aaKnown RBP8.36□□□□□ -1.07
SF3A3-208ENST00000489537 ATF3P18847 181 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 PPP1R15BQ5SWA1 713 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-208ENST00000489537 ORAI2Q96SN7 254 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 ADGRL3Q9HAR2 1447 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 PLEKHH1Q9ULM0 1364 aa8.35□□□□□ -1.07
SF3A3-208ENST00000489537 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
SF3A3-208ENST00000489537 NHSL1Q5SYE7 1610 aa8.34□□□□□ -1.07
SF3A3-208ENST00000489537 SAFB2Q14151 953 aaKnown RBP eCLIP8.34□□□□□ -1.07
SF3A3-208ENST00000489537 CRISPLD2Q9H0B8 497 aa8.34□□□□□ -1.07
SF3A3-208ENST00000489537 PPP4R2Q9NY27 417 aa8.34□□□□□ -1.07
SF3A3-208ENST00000489537 ADAMTS8Q9UP79 889 aa8.34□□□□□ -1.07
SF3A3-208ENST00000489537 ADGRB2O60241 1585 aa8.34□□□□□ -1.07
SF3A3-208ENST00000489537 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
SF3A3-208ENST00000489537 NUTM2BA6NNL0 878 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-208ENST00000489537 NUTM2EB1AL46 878 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-208ENST00000489537 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
SF3A3-208ENST00000489537 GTPBP6O43824 516 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-208ENST00000489537 WAPLQ7Z5K2 1190 aa8.33□□□□□ -1.08
SF3A3-208ENST00000489537 NUTM2AQ8IVF1 878 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-208ENST00000489537 RUNDC1Q96C34 613 aa8.33□□□□□ -1.08
SF3A3-208ENST00000489537 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
SF3A3-208ENST00000489537 SHPRHQ149N8 1683 aa8.33□□□□□ -1.08
SF3A3-208ENST00000489537 RNF123Q5XPI4 1314 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 DCCP43146 1447 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 ANKARQ7Z5J8 1434 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 E9PSI1 815 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 UPF1Q92900 1129 aaKnown RBP eCLIP8.32□□□□□ -1.08
SF3A3-208ENST00000489537 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
SF3A3-208ENST00000489537 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 PNPLA6Q8IY17 1366 aa8.32□□□□□ -1.08
SF3A3-208ENST00000489537 TTC21AQ8NDW8 1320 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 CPSF1Q10570 1443 aaKnown RBP8.31□□□□□ -1.08
SF3A3-208ENST00000489537 PPIP5K1Q6PFW1 1433 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 FYB1O15117 783 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 CT47B1P0C2W7 299 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-208ENST00000489537 MTHFSP49914 203 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 CALD1Q05682 793 aaKnown RBP8.31□□□□□ -1.08
SF3A3-208ENST00000489537 WDR63Q8IWG1 891 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 DDX27Q96GQ7 796 aaKnown RBP8.31□□□□□ -1.08
SF3A3-208ENST00000489537 COG3Q96JB2 828 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 RCAN3Q9UKA8 241 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 CDC42BPGQ6DT37 1551 aa8.31□□□□□ -1.08
SF3A3-208ENST00000489537 NUTM2FA1L443 756 aa8.3□□□□□ -1.08
SF3A3-208ENST00000489537 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-208ENST00000489537 AAMPQ13685 434 aa8.3□□□□□ -1.08
SF3A3-208ENST00000489537 OXER1Q8TDS5 423 aa8.3□□□□□ -1.08
SF3A3-208ENST00000489537 AFF2P51816 1311 aa8.29□□□□□ -1.08
SF3A3-208ENST00000489537 SPATA31A6Q5VVP1 1343 aa8.29□□□□□ -1.08
SF3A3-208ENST00000489537 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
SF3A3-208ENST00000489537 FCHSD2O94868 740 aa8.29□□□□□ -1.08
SF3A3-208ENST00000489537 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
SF3A3-208ENST00000489537 MYH16Q9H6N6 1097 aa8.29□□□□□ -1.08
SF3A3-208ENST00000489537 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-208ENST00000489537 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
SF3A3-208ENST00000489537 CD163L1Q9NR16 1453 aa8.28□□□□□ -1.08
SF3A3-208ENST00000489537 LMOD3Q0VAK6 560 aa8.28□□□□□ -1.08
SF3A3-208ENST00000489537 ZNF521Q96K83 1311 aa8.28□□□□□ -1.08
SF3A3-208ENST00000489537 PXDNQ92626 1479 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 KIF24Q5T7B8 1368 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 ANKRD26Q9UPS8 1709 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 ADAMTS2O95450 1211 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-208ENST00000489537 MS4A1P11836 297 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-208ENST00000489537 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.09
SF3A3-208ENST00000489537 ADGRD1Q6QNK2 874 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 IL16Q14005 1332 aa8.27□□□□□ -1.09
SF3A3-208ENST00000489537 SRCAPQ6ZRS2 3230 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 TK2O00142 265 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 SLFN5Q08AF3 891 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 MEX3CQ5U5Q3 659 aaKnown RBP8.26□□□□□ -1.09
SF3A3-208ENST00000489537 POTEEQ6S8J3 1075 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 ZNF454Q8N9F8 522 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 ZNF428Q96B54 188 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 C8orf37Q96NL8 207 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 GGNBP2Q9H3C7 697 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms