RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 BMP2KLQ5H9B9 411 aa15.84■□□□□ 0.13
CLIC4-202ENST00000488683 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
CLIC4-202ENST00000488683 NALCNQ8IZF0 1738 aa15.84■□□□□ 0.13
CLIC4-202ENST00000488683 RGPD1P0DJD0 1748 aa15.84■□□□□ 0.13
CLIC4-202ENST00000488683 AK9Q5TCS8 1911 aa15.83■□□□□ 0.12
CLIC4-202ENST00000488683 RGS12O14924 1447 aa15.83■□□□□ 0.12
CLIC4-202ENST00000488683 RBM25P49756 843 aaKnown RBP15.83■□□□□ 0.12
CLIC4-202ENST00000488683 PLEKHG3A1L390 1219 aa15.82■□□□□ 0.12
CLIC4-202ENST00000488683 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
CLIC4-202ENST00000488683 API5Q9BZZ5 524 aaKnown RBP15.82■□□□□ 0.12
CLIC4-202ENST00000488683 HSP90AB1P08238 724 aaKnown RBP15.82■□□□□ 0.12
CLIC4-202ENST00000488683 PLEKHG1Q9ULL1 1385 aa15.82■□□□□ 0.12
CLIC4-202ENST00000488683 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
CLIC4-202ENST00000488683 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
CLIC4-202ENST00000488683 MTHFSDQ2M296 383 aaKnown RBP15.81■□□□□ 0.12
CLIC4-202ENST00000488683 MSH6P52701 1360 aa15.81■□□□□ 0.12
CLIC4-202ENST00000488683 CHL1O00533 1208 aa15.81■□□□□ 0.12
CLIC4-202ENST00000488683 PLEKHM2Q8IWE5 1019 aa15.81■□□□□ 0.12
CLIC4-202ENST00000488683 USHBP1Q8N6Y0 703 aa15.81■□□□□ 0.12
CLIC4-202ENST00000488683 ZBTB7CA1YPR0 619 aa15.8■□□□□ 0.12
CLIC4-202ENST00000488683 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
CLIC4-202ENST00000488683 CHMP5Q9NZZ3 219 aa15.8■□□□□ 0.12
CLIC4-202ENST00000488683 SSH2Q76I76 1423 aa15.8■□□□□ 0.12
CLIC4-202ENST00000488683 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
CLIC4-202ENST00000488683 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
CLIC4-202ENST00000488683 C14orf37Q86TY3 774 aa15.79■□□□□ 0.12
CLIC4-202ENST00000488683 ATP10DQ9P241 1426 aa15.79■□□□□ 0.12
CLIC4-202ENST00000488683 TRAK2O60296 914 aa15.79■□□□□ 0.12
CLIC4-202ENST00000488683 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
CLIC4-202ENST00000488683 FMN2Q9NZ56 1722 aa15.78■□□□□ 0.12
CLIC4-202ENST00000488683 INTS3Q68E01 1043 aaKnown RBP15.78■□□□□ 0.12
CLIC4-202ENST00000488683 NGDNQ8NEJ9 315 aaKnown RBP15.78■□□□□ 0.12
CLIC4-202ENST00000488683 GAS2L2Q8NHY3 880 aa15.78■□□□□ 0.12
CLIC4-202ENST00000488683 TNPO1Q92973 898 aaKnown RBP15.78■□□□□ 0.12
CLIC4-202ENST00000488683 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
CLIC4-202ENST00000488683 CRB1P82279 1406 aa15.78■□□□□ 0.12
CLIC4-202ENST00000488683 NCOA3Q9Y6Q9 1424 aa15.78■□□□□ 0.12
CLIC4-202ENST00000488683 SETD1BQ9UPS6 1966 aaKnown RBP15.77■□□□□ 0.12
CLIC4-202ENST00000488683 CEP85Q6P2H3 762 aa15.77■□□□□ 0.11
CLIC4-202ENST00000488683 TSPYL4Q9UJ04 414 aa15.77■□□□□ 0.11
CLIC4-202ENST00000488683 XRCC6P12956 609 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLIC4-202ENST00000488683 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
CLIC4-202ENST00000488683 DDIT3P35638 169 aa15.76■□□□□ 0.11
CLIC4-202ENST00000488683 AMPHP49418 695 aa15.76■□□□□ 0.11
CLIC4-202ENST00000488683 EXOC6BQ9Y2D4 811 aa15.76■□□□□ 0.11
CLIC4-202ENST00000488683 EYA1Q99502 592 aa15.75■□□□□ 0.11
CLIC4-202ENST00000488683 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
CLIC4-202ENST00000488683 SSFA2P28290 1259 aa15.75■□□□□ 0.11
CLIC4-202ENST00000488683 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
CLIC4-202ENST00000488683 SNX21Q969T3 373 aa15.75■□□□□ 0.11
CLIC4-202ENST00000488683 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
CLIC4-202ENST00000488683 PKP1Q13835 747 aa15.74■□□□□ 0.11
CLIC4-202ENST00000488683 ANKRD44Q8N8A2 993 aa15.74■□□□□ 0.11
CLIC4-202ENST00000488683 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
CLIC4-202ENST00000488683 SDSP20132 328 aa15.74■□□□□ 0.11
CLIC4-202ENST00000488683 NLRP6P59044 892 aa15.74■□□□□ 0.11
CLIC4-202ENST00000488683 PIK3C2AO00443 1686 aa15.73■□□□□ 0.11
CLIC4-202ENST00000488683 CDC45O75419 566 aa15.73■□□□□ 0.11
CLIC4-202ENST00000488683 FOXD4L5Q5VV16 416 aaPredicted RBP15.73■□□□□ 0.11
CLIC4-202ENST00000488683 FOXD4L4Q8WXT5 416 aaPredicted RBP15.73■□□□□ 0.11
CLIC4-202ENST00000488683 RRAGDQ9NQL2 400 aaPredicted RBP15.73■□□□□ 0.11
CLIC4-202ENST00000488683 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
CLIC4-202ENST00000488683 ARHGEF10O15013 1369 aa15.73■□□□□ 0.11
CLIC4-202ENST00000488683 TTC22Q5TAA0 569 aa15.73■□□□□ 0.11
CLIC4-202ENST00000488683 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
CLIC4-202ENST00000488683 EID1Q9Y6B2 187 aa15.72■□□□□ 0.11
CLIC4-202ENST00000488683 NOL8Q76FK4 1167 aaKnown RBP15.72■□□□□ 0.11
CLIC4-202ENST00000488683 FLT4P35916 1363 aa15.71■□□□□ 0.11
CLIC4-202ENST00000488683 GOLGA6L3A6NEY3 463 aa15.71■□□□□ 0.11
CLIC4-202ENST00000488683 SBNO1A3KN83 1393 aa15.71■□□□□ 0.11
CLIC4-202ENST00000488683 KDRP35968 1356 aa15.71■□□□□ 0.1
CLIC4-202ENST00000488683 ARHGAP23Q9P227 1491 aa15.7■□□□□ 0.1
CLIC4-202ENST00000488683 PTPRCP08575 1304 aa15.7■□□□□ 0.1
CLIC4-202ENST00000488683 TTC21AQ8NDW8 1320 aa15.7■□□□□ 0.1
CLIC4-202ENST00000488683 K7ELQ4 463 aaPredicted RBP15.7■□□□□ 0.1
CLIC4-202ENST00000488683 GAS2L3Q86XJ1 694 aa15.7■□□□□ 0.1
CLIC4-202ENST00000488683 SLIT1O75093 1534 aa15.7■□□□□ 0.1
CLIC4-202ENST00000488683 DTNBO60941 627 aa15.7■□□□□ 0.1
CLIC4-202ENST00000488683 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
CLIC4-202ENST00000488683 RPAP2Q8IXW5 612 aaPredicted RBP15.69■□□□□ 0.1
CLIC4-202ENST00000488683 IGSF1Q8N6C5 1336 aa15.69■□□□□ 0.1
CLIC4-202ENST00000488683 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
CLIC4-202ENST00000488683 MAP4K4O95819 1239 aaPredicted RBP15.68■□□□□ 0.1
CLIC4-202ENST00000488683 ANXA1P04083 346 aa15.68■□□□□ 0.1
CLIC4-202ENST00000488683 FKBP5Q13451 457 aaPredicted RBP15.68■□□□□ 0.1
CLIC4-202ENST00000488683 ZGPATQ8N5A5 531 aaKnown RBP15.68■□□□□ 0.1
CLIC4-202ENST00000488683 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
CLIC4-202ENST00000488683 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
CLIC4-202ENST00000488683 KCNA6P17658 529 aa15.68■□□□□ 0.1
CLIC4-202ENST00000488683 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
CLIC4-202ENST00000488683 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
CLIC4-202ENST00000488683 USP26Q9BXU7 913 aa15.67■□□□□ 0.1
CLIC4-202ENST00000488683 PHAXQ9H814 394 aaKnown RBP15.67■□□□□ 0.1
CLIC4-202ENST00000488683 EIF2S2P20042 333 aaKnown RBP15.67■□□□□ 0.1
CLIC4-202ENST00000488683 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
CLIC4-202ENST00000488683 RAB3GAP1Q15042 981 aa15.66■□□□□ 0.1
CLIC4-202ENST00000488683 XRN1Q8IZH2 1706 aaKnown RBP15.66■□□□□ 0.1
CLIC4-202ENST00000488683 IL17REQ8NFR9 667 aa15.66■□□□□ 0.1
CLIC4-202ENST00000488683 IL1RAPL2Q9NP60 686 aa15.66■□□□□ 0.1
CLIC4-202ENST00000488683 NWD1Q149M9 1564 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms