RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 TMEM57Q8N5G2 664 aa8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 ZBTB40Q9NUA8 1239 aa8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 DCCP43146 1447 aa8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 LMTK3Q96Q04 1460 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 GNAT3A8MTJ3 354 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 HAP1P54257 671 aaPredicted RBP8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 NBPF6Q5VWK0 638 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 CADPS2Q86UW7 1296 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 IL17REQ8NFR9 667 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 NBPF4Q96M43 638 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 SLIT3O75094 1523 aa8.59□□□□□ -1.03
RN7SL561P-201ENST00000488553 ZBTB7BO15156 539 aaPredicted RBP8.58□□□□□ -1.04
RN7SL561P-201ENST00000488553 HDAC1Q13547 482 aaPredicted RBP8.58□□□□□ -1.04
RN7SL561P-201ENST00000488553 ITPRIPQ8IWB1 547 aa8.58□□□□□ -1.04
RN7SL561P-201ENST00000488553 MIS18AQ9NYP9 233 aa8.58□□□□□ -1.04
RN7SL561P-201ENST00000488553 TAF7Q15545 349 aaPredicted RBP8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 KRT24Q2M2I5 525 aa8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 API5Q9BZZ5 524 aaKnown RBP8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 CHMP4BQ9H444 224 aaKnown RBP8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 AXIN2Q9Y2T1 843 aa8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 MSH6P52701 1360 aa8.57□□□□□ -1.04
RN7SL561P-201ENST00000488553 ABCC4O15439 1325 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 MSH5O43196 834 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 TSPYL4Q9UJ04 414 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 TRPM3Q9HCF6 1732 aaPredicted RBP8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 MAP3K5Q99683 1374 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 DLG5Q8TDM6 1919 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
RN7SL561P-201ENST00000488553 NPHP3Q7Z494 1330 aa8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 NCAPD2Q15021 1401 aa8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 PHRF1Q9P1Y6 1649 aaKnown RBP8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 RGS3P49796 1198 aa8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 PLEKHO1Q53GL0 409 aaPredicted RBP8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 INTS3Q68E01 1043 aaKnown RBP8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 DDX17Q92841 729 aaKnown RBP8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
RN7SL561P-201ENST00000488553 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 CEMIPQ8WUJ3 1361 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 SMC5Q8IY18 1101 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 LGR6Q9HBX8 967 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 PTPRCP08575 1304 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
RN7SL561P-201ENST00000488553 MED1Q15648 1581 aaPredicted RBP8.53□□□□□ -1.04
RN7SL561P-201ENST00000488553 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
RN7SL561P-201ENST00000488553 C8orf34Q49A92 452 aa8.53□□□□□ -1.04
RN7SL561P-201ENST00000488553 AKAP4Q5JQC9 854 aa8.53□□□□□ -1.04
RN7SL561P-201ENST00000488553 BRINP3Q76B58 766 aa8.53□□□□□ -1.04
RN7SL561P-201ENST00000488553 SLAIN2Q9P270 581 aa8.53□□□□□ -1.04
RN7SL561P-201ENST00000488553 PXDNQ92626 1479 aa8.52□□□□□ -1.05
RN7SL561P-201ENST00000488553 PLEKHG5O94827 1062 aa8.52□□□□□ -1.05
RN7SL561P-201ENST00000488553 LTN1O94822 1766 aa8.52□□□□□ -1.05
RN7SL561P-201ENST00000488553 ALS2Q96Q42 1657 aa8.52□□□□□ -1.05
RN7SL561P-201ENST00000488553 ZNF335Q9H4Z2 1342 aaPredicted RBP8.52□□□□□ -1.05
RN7SL561P-201ENST00000488553 STRCQ7RTU9 1775 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 RNMTO43148 476 aaKnown RBP8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 ANP32AP39687 249 aaKnown RBP8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 NUCB1Q02818 461 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 CCDC30Q5VVM6 783 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 ZNF530Q6P9A1 599 aaPredicted RBP8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 G2E3Q7L622 706 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 IPO9Q96P70 1041 aaKnown RBP8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 RGS12O14924 1447 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 ERBB3P21860 1342 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 LRRC37A3O60309 1634 aa8.51□□□□□ -1.05
RN7SL561P-201ENST00000488553 EIF4A1P60842 406 aaKnown RBP8.5□□□□□ -1.05
RN7SL561P-201ENST00000488553 TNS3Q68CZ2 1445 aa8.5□□□□□ -1.05
RN7SL561P-201ENST00000488553 CHMP4AQ9BY43 222 aa8.5□□□□□ -1.05
RN7SL561P-201ENST00000488553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.5□□□□□ -1.05
RN7SL561P-201ENST00000488553 SOS2Q07890 1332 aaPredicted RBP8.5□□□□□ -1.05
RN7SL561P-201ENST00000488553 CPDO75976 1380 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 HOXB7P09629 217 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 C1orf141Q5JVX7 400 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 RPAP2Q8IXW5 612 aaPredicted RBP8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 FBXO41Q8TF61 875 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 GCC1Q96CN9 775 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 STK31Q9BXU1 1019 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
RN7SL561P-201ENST00000488553 OVOS2A0A0G2JMS6 1433 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 CCT4P50991 539 aaKnown RBP8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 TEFQ10587 303 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 CHD1LQ86WJ1 897 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 ANKRD44Q8N8A2 993 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
RN7SL561P-201ENST00000488553 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms