RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
RER1-207ENST00000488353 ACEP12821 1306 aa17.56■□□□□ 0.4
RER1-207ENST00000488353 MON2Q7Z3U7 1717 aa17.56■□□□□ 0.4
RER1-207ENST00000488353 ZNF445P59923 1031 aa17.56■□□□□ 0.4
RER1-207ENST00000488353 THEMISQ8N1K5 641 aaPredicted RBP17.55■□□□□ 0.4
RER1-207ENST00000488353 KIF2CQ99661 725 aa17.55■□□□□ 0.4
RER1-207ENST00000488353 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
RER1-207ENST00000488353 SLIT1O75093 1534 aa17.55■□□□□ 0.4
RER1-207ENST00000488353 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
RER1-207ENST00000488353 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 NUCB1Q02818 461 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 SSFA2P28290 1259 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 IL13P35225 146 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
RER1-207ENST00000488353 BAG4O95429 457 aaKnown RBP17.53■□□□□ 0.4
RER1-207ENST00000488353 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
RER1-207ENST00000488353 SOX12O15370 315 aa17.53■□□□□ 0.4
RER1-207ENST00000488353 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
RER1-207ENST00000488353 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
RER1-207ENST00000488353 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
RER1-207ENST00000488353 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
RER1-207ENST00000488353 SMAP1Q8IYB5 467 aaPredicted RBP17.52■□□□□ 0.4
RER1-207ENST00000488353 AATKQ6ZMQ8 1374 aa17.52■□□□□ 0.39
RER1-207ENST00000488353 UQCRHLA0A096LP55 91 aa17.52■□□□□ 0.39
RER1-207ENST00000488353 CD2BP2O95400 341 aaKnown RBP17.52■□□□□ 0.39
RER1-207ENST00000488353 UQCRHP07919 91 aa17.52■□□□□ 0.39
RER1-207ENST00000488353 ANKRD45Q5TZF3 282 aa17.52■□□□□ 0.39
RER1-207ENST00000488353 CHD1LQ86WJ1 897 aa17.52■□□□□ 0.39
RER1-207ENST00000488353 PDLIM2Q96JY6 352 aa17.52■□□□□ 0.39
RER1-207ENST00000488353 DYNC1I1O14576 645 aa17.51■□□□□ 0.39
RER1-207ENST00000488353 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
RER1-207ENST00000488353 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
RER1-207ENST00000488353 VAMP4O75379 141 aa17.5■□□□□ 0.39
RER1-207ENST00000488353 MCM5P33992 734 aa17.5■□□□□ 0.39
RER1-207ENST00000488353 PLEKHG3A1L390 1219 aa17.49■□□□□ 0.39
RER1-207ENST00000488353 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
RER1-207ENST00000488353 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
RER1-207ENST00000488353 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
RER1-207ENST00000488353 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.48■□□□□ 0.39
RER1-207ENST00000488353 USP6P35125 1406 aa17.48■□□□□ 0.39
RER1-207ENST00000488353 TOPAZ1Q8N9V7 1692 aa17.48■□□□□ 0.39
RER1-207ENST00000488353 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
RER1-207ENST00000488353 ZSCAN23Q3MJ62 389 aa17.48■□□□□ 0.39
RER1-207ENST00000488353 ZKSCAN5Q9Y2L8 839 aa17.48■□□□□ 0.39
RER1-207ENST00000488353 KCNA6P17658 529 aa17.47■□□□□ 0.39
RER1-207ENST00000488353 MBIPQ9NS73 344 aa17.47■□□□□ 0.39
RER1-207ENST00000488353 NUCB2P80303 420 aa17.47■□□□□ 0.39
RER1-207ENST00000488353 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
RER1-207ENST00000488353 FAM83GA6ND36 823 aa17.46■□□□□ 0.39
RER1-207ENST00000488353 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
RER1-207ENST00000488353 NCLP19338 710 aaKnown RBP17.46■□□□□ 0.39
RER1-207ENST00000488353 GNAI1P63096 354 aa17.46■□□□□ 0.39
RER1-207ENST00000488353 RBSNQ9H1K0 784 aa17.46■□□□□ 0.39
RER1-207ENST00000488353 PTCH1Q13635 1447 aa17.46■□□□□ 0.38
RER1-207ENST00000488353 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
RER1-207ENST00000488353 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 C8orf58Q8NAV2 365 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
RER1-207ENST00000488353 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
RER1-207ENST00000488353 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
RER1-207ENST00000488353 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
RER1-207ENST00000488353 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 SASS6Q6UVJ0 657 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 TBC1D9Q6ZT07 1266 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 RBM33Q96EV2 1170 aaKnown RBP17.44■□□□□ 0.38
RER1-207ENST00000488353 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 DIP2AQ14689 1571 aa17.44■□□□□ 0.38
RER1-207ENST00000488353 RIMS1Q86UR5 1692 aaKnown RBP17.43■□□□□ 0.38
RER1-207ENST00000488353 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
RER1-207ENST00000488353 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
RER1-207ENST00000488353 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
RER1-207ENST00000488353 CEP170BQ9Y4F5 1589 aaPredicted RBP17.43■□□□□ 0.38
RER1-207ENST00000488353 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
RER1-207ENST00000488353 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
RER1-207ENST00000488353 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
RER1-207ENST00000488353 CCDC39Q9UFE4 941 aa17.42■□□□□ 0.38
RER1-207ENST00000488353 DLG5Q8TDM6 1919 aa17.42■□□□□ 0.38
RER1-207ENST00000488353 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
RER1-207ENST00000488353 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
RER1-207ENST00000488353 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
RER1-207ENST00000488353 SSH2Q76I76 1423 aa17.4■□□□□ 0.38
RER1-207ENST00000488353 RABEP1Q15276 862 aa17.4■□□□□ 0.38
RER1-207ENST00000488353 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
RER1-207ENST00000488353 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
RER1-207ENST00000488353 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
RER1-207ENST00000488353 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
RER1-207ENST00000488353 ABCC4O15439 1325 aa17.39■□□□□ 0.37
RER1-207ENST00000488353 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
RER1-207ENST00000488353 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
RER1-207ENST00000488353 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
RER1-207ENST00000488353 UTP14CQ5TAP6 766 aaKnown RBP17.38■□□□□ 0.37
RER1-207ENST00000488353 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms