RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 KDRP35968 1356 aa14.87□□□□□ -0.03
UBE4B-210ENST00000488228 DDB1Q16531 1140 aa14.87□□□□□ -0.03
UBE4B-210ENST00000488228 CDCA7Q9BWT1 371 aaPredicted RBP14.87□□□□□ -0.03
UBE4B-210ENST00000488228 RAPGEF4Q8WZA2 1011 aa14.86□□□□□ -0.03
UBE4B-210ENST00000488228 ITGB4P16144 1822 aa14.85□□□□□ -0.03
UBE4B-210ENST00000488228 U2SURPO15042 1029 aaKnown RBP14.85□□□□□ -0.03
UBE4B-210ENST00000488228 DLG5Q8TDM6 1919 aa14.84□□□□□ -0.03
UBE4B-210ENST00000488228 HMOX1P09601 288 aa14.84□□□□□ -0.03
UBE4B-210ENST00000488228 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
UBE4B-210ENST00000488228 PDE3BQ13370 1112 aa14.84□□□□□ -0.03
UBE4B-210ENST00000488228 SULT6B1Q6IMI4 303 aa14.84□□□□□ -0.03
UBE4B-210ENST00000488228 BTAF1O14981 1849 aa14.84□□□□□ -0.03
UBE4B-210ENST00000488228 ANP32CO43423 234 aa14.83□□□□□ -0.04
UBE4B-210ENST00000488228 SCN11AQ9UI33 1791 aa14.83□□□□□ -0.04
UBE4B-210ENST00000488228 EXOC5O00471 708 aa14.82□□□□□ -0.04
UBE4B-210ENST00000488228 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
UBE4B-210ENST00000488228 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
UBE4B-210ENST00000488228 DDX54Q8TDD1 881 aaKnown RBP14.8□□□□□ -0.04
UBE4B-210ENST00000488228 PCDH11XQ9BZA7 1347 aa14.8□□□□□ -0.04
UBE4B-210ENST00000488228 PCDH11YQ9BZA8 1340 aa14.8□□□□□ -0.04
UBE4B-210ENST00000488228 PLEKHG2Q9H7P9 1386 aa14.8□□□□□ -0.04
UBE4B-210ENST00000488228 RGPD3A6NKT7 1758 aaPredicted RBP14.79□□□□□ -0.04
UBE4B-210ENST00000488228 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
UBE4B-210ENST00000488228 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
UBE4B-210ENST00000488228 RGPD4Q7Z3J3 1758 aa14.79□□□□□ -0.04
UBE4B-210ENST00000488228 ADAMTS7Q9UKP4 1686 aa14.79□□□□□ -0.04
UBE4B-210ENST00000488228 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
UBE4B-210ENST00000488228 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
UBE4B-210ENST00000488228 RSPH6AQ9H0K4 717 aa14.78□□□□□ -0.04
UBE4B-210ENST00000488228 BCL9O00512 1426 aa14.77□□□□□ -0.04
UBE4B-210ENST00000488228 CYP27B1O15528 508 aa14.77□□□□□ -0.05
UBE4B-210ENST00000488228 PRKAR2BP31323 418 aa14.77□□□□□ -0.05
UBE4B-210ENST00000488228 SPG7Q9UQ90 795 aa14.77□□□□□ -0.05
UBE4B-210ENST00000488228 RREB1Q92766 1687 aa14.77□□□□□ -0.05
UBE4B-210ENST00000488228 SIPA1L3O60292 1781 aaPredicted RBP14.76□□□□□ -0.05
UBE4B-210ENST00000488228 ZNF530Q6P9A1 599 aaPredicted RBP14.76□□□□□ -0.05
UBE4B-210ENST00000488228 FAM196AQ6ZSG2 479 aa14.76□□□□□ -0.05
UBE4B-210ENST00000488228 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
UBE4B-210ENST00000488228 SOCS7O14512 581 aa14.75□□□□□ -0.05
UBE4B-210ENST00000488228 UPF1Q92900 1129 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBE4B-210ENST00000488228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBE4B-210ENST00000488228 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
UBE4B-210ENST00000488228 TRIM37O94972 964 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 PHKG2P15735 406 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 PLEKHO1Q53GL0 409 aaPredicted RBP14.74□□□□□ -0.05
UBE4B-210ENST00000488228 DIEXFQ68CQ4 756 aaKnown RBP14.74□□□□□ -0.05
UBE4B-210ENST00000488228 PTF1AQ7RTS3 328 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 ACSBG1Q96GR2 724 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 LY75O60449 1722 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
UBE4B-210ENST00000488228 AMOTQ4VCS5 1084 aa14.73□□□□□ -0.05
UBE4B-210ENST00000488228 MRC1P22897 1456 aa14.72□□□□□ -0.05
UBE4B-210ENST00000488228 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
UBE4B-210ENST00000488228 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
UBE4B-210ENST00000488228 PHACTR3Q96KR7 559 aa14.72□□□□□ -0.05
UBE4B-210ENST00000488228 KCNQ2O43526 872 aa14.71□□□□□ -0.05
UBE4B-210ENST00000488228 FCHSD2O94868 740 aa14.71□□□□□ -0.05
UBE4B-210ENST00000488228 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
UBE4B-210ENST00000488228 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
UBE4B-210ENST00000488228 C1orf141Q5JVX7 400 aa14.7□□□□□ -0.06
UBE4B-210ENST00000488228 CCDC146Q8IYE0 955 aa14.7□□□□□ -0.06
UBE4B-210ENST00000488228 SYTL4Q96C24 671 aaPredicted RBP14.7□□□□□ -0.06
UBE4B-210ENST00000488228 PLEKHF1Q96S99 279 aa14.69□□□□□ -0.06
UBE4B-210ENST00000488228 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 UBR2Q8IWV8 1755 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
UBE4B-210ENST00000488228 NKX1-1Q15270 411 aaPredicted RBP14.68□□□□□ -0.06
UBE4B-210ENST00000488228 MPRIPQ6WCQ1 1025 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 TAF1LQ8IZX4 1826 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 C5P01031 1676 aa14.68□□□□□ -0.06
UBE4B-210ENST00000488228 SF3B2Q13435 895 aaKnown RBP14.67□□□□□ -0.06
UBE4B-210ENST00000488228 AKAP4Q5JQC9 854 aa14.67□□□□□ -0.06
UBE4B-210ENST00000488228 DEFB132Q7Z7B7 95 aa14.67□□□□□ -0.06
UBE4B-210ENST00000488228 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
UBE4B-210ENST00000488228 KDM3BQ7LBC6 1761 aa14.66□□□□□ -0.06
UBE4B-210ENST00000488228 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
UBE4B-210ENST00000488228 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
UBE4B-210ENST00000488228 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
UBE4B-210ENST00000488228 APBA3O96018 575 aa14.65□□□□□ -0.06
UBE4B-210ENST00000488228 NEFMP07197 916 aa14.65□□□□□ -0.06
UBE4B-210ENST00000488228 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
UBE4B-210ENST00000488228 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
UBE4B-210ENST00000488228 TJP1Q07157 1748 aa14.65□□□□□ -0.06
UBE4B-210ENST00000488228 COL5A3P25940 1745 aaPredicted RBP14.64□□□□□ -0.07
UBE4B-210ENST00000488228 BAG6P46379 1132 aa14.64□□□□□ -0.07
UBE4B-210ENST00000488228 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
UBE4B-210ENST00000488228 MIER1Q8N108 512 aa14.64□□□□□ -0.07
UBE4B-210ENST00000488228 GNAT3A8MTJ3 354 aa14.63□□□□□ -0.07
UBE4B-210ENST00000488228 NFE2L2Q16236 605 aa14.63□□□□□ -0.07
UBE4B-210ENST00000488228 PNNQ9H307 717 aaKnown RBP14.63□□□□□ -0.07
UBE4B-210ENST00000488228 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
UBE4B-210ENST00000488228 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
UBE4B-210ENST00000488228 RRP7AQ9Y3A4 280 aaKnown RBP14.63□□□□□ -0.07
UBE4B-210ENST00000488228 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
UBE4B-210ENST00000488228 CEMIPQ8WUJ3 1361 aa14.62□□□□□ -0.07
UBE4B-210ENST00000488228 ZNF831Q5JPB2 1677 aa14.62□□□□□ -0.07
UBE4B-210ENST00000488228 SENP3-EIF4A1A0A087X0R7 540 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms