RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
PDAP1-203ENST00000488214 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
PDAP1-203ENST00000488214 CALD1Q05682 793 aaKnown RBP9.01□□□□□ -0.97
PDAP1-203ENST00000488214 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
PDAP1-203ENST00000488214 IL16Q14005 1332 aa9.01□□□□□ -0.97
PDAP1-203ENST00000488214 DCTN1Q14203 1278 aa9□□□□□ -0.97
PDAP1-203ENST00000488214 TSR2Q969E8 191 aaKnown RBP9□□□□□ -0.97
PDAP1-203ENST00000488214 LAS1LQ9Y4W2 734 aaKnown RBP9□□□□□ -0.97
PDAP1-203ENST00000488214 WDR17Q8IZU2 1322 aa9□□□□□ -0.97
PDAP1-203ENST00000488214 TNKS1BP1Q9C0C2 1729 aaKnown RBP9□□□□□ -0.97
PDAP1-203ENST00000488214 OVOS2A0A0G2JMS6 1433 aa8.99□□□□□ -0.97
PDAP1-203ENST00000488214 FKBP8Q14318 412 aa8.99□□□□□ -0.97
PDAP1-203ENST00000488214 ZNF530Q6P9A1 599 aaPredicted RBP8.99□□□□□ -0.97
PDAP1-203ENST00000488214 MCM10Q7L590 875 aa8.99□□□□□ -0.97
PDAP1-203ENST00000488214 TRMT2AQ8IZ69 625 aaKnown RBP8.99□□□□□ -0.97
PDAP1-203ENST00000488214 RTF1Q92541 710 aaKnown RBP8.99□□□□□ -0.97
PDAP1-203ENST00000488214 STRN4Q9NRL3 753 aa8.99□□□□□ -0.97
PDAP1-203ENST00000488214 TOGARAM1Q9Y4F4 1720 aa8.99□□□□□ -0.97
PDAP1-203ENST00000488214 JCADQ9P266 1359 aa8.99□□□□□ -0.97
PDAP1-203ENST00000488214 CRB1P82279 1406 aa8.98□□□□□ -0.97
PDAP1-203ENST00000488214 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
PDAP1-203ENST00000488214 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
PDAP1-203ENST00000488214 RRP1P56182 461 aaKnown RBP8.98□□□□□ -0.97
PDAP1-203ENST00000488214 TOM1L2Q6ZVM7 507 aa8.98□□□□□ -0.97
PDAP1-203ENST00000488214 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
PDAP1-203ENST00000488214 RAPGEF4Q8WZA2 1011 aa8.98□□□□□ -0.97
PDAP1-203ENST00000488214 IFT57Q9NWB7 429 aa8.98□□□□□ -0.97
PDAP1-203ENST00000488214 LRP6O75581 1613 aa8.98□□□□□ -0.97
PDAP1-203ENST00000488214 PLEKHG2Q9H7P9 1386 aa8.98□□□□□ -0.97
PDAP1-203ENST00000488214 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
PDAP1-203ENST00000488214 ADAMTS2O95450 1211 aa8.97□□□□□ -0.97
PDAP1-203ENST00000488214 TATP17735 454 aaPredicted RBP8.97□□□□□ -0.97
PDAP1-203ENST00000488214 GNAI1P63096 354 aa8.97□□□□□ -0.97
PDAP1-203ENST00000488214 PLEKHO1Q53GL0 409 aaPredicted RBP8.97□□□□□ -0.97
PDAP1-203ENST00000488214 BTG4Q9NY30 223 aa8.97□□□□□ -0.97
PDAP1-203ENST00000488214 DOT1LQ8TEK3 1739 aa8.97□□□□□ -0.97
PDAP1-203ENST00000488214 MRC1P22897 1456 aa8.96□□□□□ -0.97
PDAP1-203ENST00000488214 EVA1CP58658 441 aa8.96□□□□□ -0.98
PDAP1-203ENST00000488214 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
PDAP1-203ENST00000488214 AMOTQ4VCS5 1084 aa8.96□□□□□ -0.98
PDAP1-203ENST00000488214 C1orf141Q5JVX7 400 aa8.96□□□□□ -0.98
PDAP1-203ENST00000488214 C5P01031 1676 aa8.96□□□□□ -0.98
PDAP1-203ENST00000488214 RNF123Q5XPI4 1314 aa8.96□□□□□ -0.98
PDAP1-203ENST00000488214 LAMB4A4D0S4 1761 aa8.96□□□□□ -0.98
PDAP1-203ENST00000488214 SLIT2O94813 1529 aa8.95□□□□□ -0.98
PDAP1-203ENST00000488214 PAPPAQ13219 1627 aa8.95□□□□□ -0.98
PDAP1-203ENST00000488214 HTATSF1O43719 755 aaKnown RBP8.95□□□□□ -0.98
PDAP1-203ENST00000488214 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
PDAP1-203ENST00000488214 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
PDAP1-203ENST00000488214 MBIPQ9NS73 344 aa8.95□□□□□ -0.98
PDAP1-203ENST00000488214 KDM6AO15550 1401 aaPredicted RBP8.95□□□□□ -0.98
PDAP1-203ENST00000488214 ITGB4P16144 1822 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 CANXP27824 592 aaKnown RBP8.94□□□□□ -0.98
PDAP1-203ENST00000488214 AKAP4Q5JQC9 854 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 CARD10Q9BWT7 1032 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 USP35Q9P2H5 1018 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 SPG7Q9UQ90 795 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 CEMIPQ8WUJ3 1361 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 DISP2A7MBM2 1401 aa8.94□□□□□ -0.98
PDAP1-203ENST00000488214 PLIN1O60240 522 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 CT47B1P0C2W7 299 aaPredicted RBP8.93□□□□□ -0.98
PDAP1-203ENST00000488214 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 IL2RBP14784 551 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 HSPA1LP34931 641 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.93□□□□□ -0.98
PDAP1-203ENST00000488214 BCL2L13Q9BXK5 485 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 SMC4Q9NTJ3 1288 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 TSPYL4Q9UJ04 414 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 TNS2Q63HR2 1409 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 N4BP2Q86UW6 1770 aaPredicted RBP8.93□□□□□ -0.98
PDAP1-203ENST00000488214 UBR2Q8IWV8 1755 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
PDAP1-203ENST00000488214 SPATA31A6Q5VVP1 1343 aa8.92□□□□□ -0.98
PDAP1-203ENST00000488214 BCAR3O75815 825 aa8.92□□□□□ -0.98
PDAP1-203ENST00000488214 KCNA4P22459 653 aa8.92□□□□□ -0.98
PDAP1-203ENST00000488214 RARSP54136 660 aaKnown RBP8.92□□□□□ -0.98
PDAP1-203ENST00000488214 MPRIPQ6WCQ1 1025 aa8.92□□□□□ -0.98
PDAP1-203ENST00000488214 GLI3P10071 1580 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 CHL1O00533 1208 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 RNMTO43148 476 aaKnown RBP8.91□□□□□ -0.98
PDAP1-203ENST00000488214 PHKG2P15735 406 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 TEFQ10587 303 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 C8orf37Q96NL8 207 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDAP1-203ENST00000488214 MIS18AQ9NYP9 233 aa8.91□□□□□ -0.98
PDAP1-203ENST00000488214 ELL2O00472 640 aaPredicted RBP8.9□□□□□ -0.98
PDAP1-203ENST00000488214 KRT24Q2M2I5 525 aa8.9□□□□□ -0.98
PDAP1-203ENST00000488214 TWISTNBQ3B726 338 aaPredicted RBP8.9□□□□□ -0.98
PDAP1-203ENST00000488214 MEX3CQ5U5Q3 659 aaKnown RBP8.9□□□□□ -0.98
PDAP1-203ENST00000488214 IFNL2Q8IZJ0 200 aa8.9□□□□□ -0.98
PDAP1-203ENST00000488214 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
PDAP1-203ENST00000488214 C8orf58Q8NAV2 365 aa8.9□□□□□ -0.98
PDAP1-203ENST00000488214 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
PDAP1-203ENST00000488214 FRAT1Q92837 279 aaPredicted RBP8.9□□□□□ -0.98
PDAP1-203ENST00000488214 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
PDAP1-203ENST00000488214 THSD7AQ9UPZ6 1657 aa8.9□□□□□ -0.98
PDAP1-203ENST00000488214 KIF16BQ96L93 1317 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms