RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
PTBP3-208ENST00000487997 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
PTBP3-208ENST00000487997 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
PTBP3-208ENST00000487997 A0A0G2JS52 829 aa13.09□□□□□ -0.31
PTBP3-208ENST00000487997 FYB1O15117 783 aa13.09□□□□□ -0.31
PTBP3-208ENST00000487997 ZEB1P37275 1124 aaPredicted RBP13.09□□□□□ -0.31
PTBP3-208ENST00000487997 MYT1Q01538 1121 aa13.09□□□□□ -0.31
PTBP3-208ENST00000487997 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
PTBP3-208ENST00000487997 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
PTBP3-208ENST00000487997 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
PTBP3-208ENST00000487997 RGS12O14924 1447 aa13.08□□□□□ -0.32
PTBP3-208ENST00000487997 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
PTBP3-208ENST00000487997 PANK3Q9H999 370 aa13.08□□□□□ -0.32
PTBP3-208ENST00000487997 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
PTBP3-208ENST00000487997 ABCC6O95255 1503 aa13.08□□□□□ -0.32
PTBP3-208ENST00000487997 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
PTBP3-208ENST00000487997 COL5A2P05997 1499 aaPredicted RBP13.07□□□□□ -0.32
PTBP3-208ENST00000487997 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
PTBP3-208ENST00000487997 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
PTBP3-208ENST00000487997 IER5LQ5T953 404 aa13.06□□□□□ -0.32
PTBP3-208ENST00000487997 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
PTBP3-208ENST00000487997 AMPHP49418 695 aa13.05□□□□□ -0.32
PTBP3-208ENST00000487997 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
PTBP3-208ENST00000487997 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
PTBP3-208ENST00000487997 TOM1L2Q6ZVM7 507 aa13.05□□□□□ -0.32
PTBP3-208ENST00000487997 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
PTBP3-208ENST00000487997 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
PTBP3-208ENST00000487997 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
PTBP3-208ENST00000487997 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
PTBP3-208ENST00000487997 CRB1P82279 1406 aa13.05□□□□□ -0.32
PTBP3-208ENST00000487997 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
PTBP3-208ENST00000487997 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
PTBP3-208ENST00000487997 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
PTBP3-208ENST00000487997 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
PTBP3-208ENST00000487997 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
PTBP3-208ENST00000487997 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
PTBP3-208ENST00000487997 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
PTBP3-208ENST00000487997 WDR17Q8IZU2 1322 aa13.03□□□□□ -0.32
PTBP3-208ENST00000487997 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
PTBP3-208ENST00000487997 SEC24BO95487 1268 aa13.02□□□□□ -0.33
PTBP3-208ENST00000487997 IP6K1Q92551 441 aa13.02□□□□□ -0.33
PTBP3-208ENST00000487997 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
PTBP3-208ENST00000487997 NSD2O96028 1365 aa13.02□□□□□ -0.33
PTBP3-208ENST00000487997 BLMP54132 1417 aaPredicted RBP13.02□□□□□ -0.33
PTBP3-208ENST00000487997 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
PTBP3-208ENST00000487997 BARGINQ6ZT62 677 aa13.01□□□□□ -0.33
PTBP3-208ENST00000487997 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
PTBP3-208ENST00000487997 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
PTBP3-208ENST00000487997 PARP4Q9UKK3 1724 aaKnown RBP13.01□□□□□ -0.33
PTBP3-208ENST00000487997 FBLN1P23142 703 aa13□□□□□ -0.33
PTBP3-208ENST00000487997 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
PTBP3-208ENST00000487997 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
PTBP3-208ENST00000487997 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
PTBP3-208ENST00000487997 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
PTBP3-208ENST00000487997 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
PTBP3-208ENST00000487997 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
PTBP3-208ENST00000487997 ERBB3P21860 1342 aa12.99□□□□□ -0.33
PTBP3-208ENST00000487997 PPM1GO15355 546 aaPredicted RBP12.99□□□□□ -0.33
PTBP3-208ENST00000487997 HOXC9P31274 260 aa12.99□□□□□ -0.33
PTBP3-208ENST00000487997 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
PTBP3-208ENST00000487997 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
PTBP3-208ENST00000487997 CARD10Q9BWT7 1032 aa12.99□□□□□ -0.33
PTBP3-208ENST00000487997 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
PTBP3-208ENST00000487997 KIF24Q5T7B8 1368 aa12.98□□□□□ -0.33
PTBP3-208ENST00000487997 PDE3BQ13370 1112 aa12.98□□□□□ -0.33
PTBP3-208ENST00000487997 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
PTBP3-208ENST00000487997 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
PTBP3-208ENST00000487997 FLT4P35916 1363 aa12.97□□□□□ -0.33
PTBP3-208ENST00000487997 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
PTBP3-208ENST00000487997 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
PTBP3-208ENST00000487997 PSEN1P49768 467 aa12.95□□□□□ -0.34
PTBP3-208ENST00000487997 DDB1Q16531 1140 aa12.95□□□□□ -0.34
PTBP3-208ENST00000487997 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTBP3-208ENST00000487997 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
PTBP3-208ENST00000487997 LRRC37A3O60309 1634 aa12.95□□□□□ -0.34
PTBP3-208ENST00000487997 INSRP06213 1382 aa12.94□□□□□ -0.34
PTBP3-208ENST00000487997 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
PTBP3-208ENST00000487997 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
PTBP3-208ENST00000487997 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
PTBP3-208ENST00000487997 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
PTBP3-208ENST00000487997 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
PTBP3-208ENST00000487997 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
PTBP3-208ENST00000487997 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
PTBP3-208ENST00000487997 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
PTBP3-208ENST00000487997 EXOC5O00471 708 aa12.93□□□□□ -0.34
PTBP3-208ENST00000487997 IL2RBP14784 551 aa12.93□□□□□ -0.34
PTBP3-208ENST00000487997 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
PTBP3-208ENST00000487997 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
PTBP3-208ENST00000487997 FAM196AQ6ZSG2 479 aa12.92□□□□□ -0.34
PTBP3-208ENST00000487997 SCUBE2Q9NQ36 999 aa12.92□□□□□ -0.34
PTBP3-208ENST00000487997 PLCG2P16885 1265 aa12.91□□□□□ -0.34
PTBP3-208ENST00000487997 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
PTBP3-208ENST00000487997 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
PTBP3-208ENST00000487997 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
PTBP3-208ENST00000487997 DISP2A7MBM2 1401 aa12.89□□□□□ -0.35
PTBP3-208ENST00000487997 EP400Q96L91 3159 aa12.89□□□□□ -0.35
PTBP3-208ENST00000487997 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
PTBP3-208ENST00000487997 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms