RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 ARFGEF1Q9Y6D6 1849 aa8.69□□□□□ -1.02
CAPN2-209ENST00000487223 CCDC136Q96JN2 1154 aa8.69□□□□□ -1.02
CAPN2-209ENST00000487223 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
CAPN2-209ENST00000487223 DLEC1Q9Y238 1755 aa8.69□□□□□ -1.02
CAPN2-209ENST00000487223 APBA3O96018 575 aa8.69□□□□□ -1.02
CAPN2-209ENST00000487223 EVA1CP58658 441 aa8.68□□□□□ -1.02
CAPN2-209ENST00000487223 DDB1Q16531 1140 aa8.68□□□□□ -1.02
CAPN2-209ENST00000487223 DCAF11Q8TEB1 546 aa8.68□□□□□ -1.02
CAPN2-209ENST00000487223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.68□□□□□ -1.02
CAPN2-209ENST00000487223 EZH2Q15910 746 aaKnown RBP8.67□□□□□ -1.02
CAPN2-209ENST00000487223 UBR3Q6ZT12 1888 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 MINK1Q8N4C8 1332 aaPredicted RBP8.67□□□□□ -1.02
CAPN2-209ENST00000487223 C4BP0C0L5 1744 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 PTGER2P43116 358 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 DEFB132Q7Z7B7 95 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 AKT1S1Q96B36 256 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 TOGARAM1Q9Y4F4 1720 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 ARFGEF2Q9Y6D5 1785 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 TONSLQ96HA7 1378 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 EN1Q05925 392 aaPredicted RBP8.67□□□□□ -1.02
CAPN2-209ENST00000487223 SLC15A2Q16348 729 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 ABTB2Q8N961 1025 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 TRAK1Q9UPV9 953 aa8.67□□□□□ -1.02
CAPN2-209ENST00000487223 ZC3H4Q9UPT8 1303 aaKnown RBP8.66□□□□□ -1.02
CAPN2-209ENST00000487223 NRXN2Q9P2S2 1712 aa8.66□□□□□ -1.02
CAPN2-209ENST00000487223 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
CAPN2-209ENST00000487223 GRIN3BO60391 1043 aa8.66□□□□□ -1.02
CAPN2-209ENST00000487223 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
CAPN2-209ENST00000487223 ERBB3P21860 1342 aa8.66□□□□□ -1.02
CAPN2-209ENST00000487223 CDCA8Q53HL2 280 aa8.66□□□□□ -1.02
CAPN2-209ENST00000487223 BBXQ8WY36 941 aaPredicted RBP8.66□□□□□ -1.02
CAPN2-209ENST00000487223 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
CAPN2-209ENST00000487223 RGL2O15211 777 aa8.65□□□□□ -1.02
CAPN2-209ENST00000487223 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
CAPN2-209ENST00000487223 CCDC9Q9Y3X0 531 aaKnown RBP8.65□□□□□ -1.02
CAPN2-209ENST00000487223 PXDNLA1KZ92 1463 aa8.65□□□□□ -1.02
CAPN2-209ENST00000487223 IP6K1Q92551 441 aa8.65□□□□□ -1.02
CAPN2-209ENST00000487223 CD2APQ9Y5K6 639 aa8.65□□□□□ -1.02
CAPN2-209ENST00000487223 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
CAPN2-209ENST00000487223 INSRP06213 1382 aa8.64□□□□□ -1.03
CAPN2-209ENST00000487223 MRC1P22897 1456 aa8.64□□□□□ -1.03
CAPN2-209ENST00000487223 BRCA1P38398 1863 aaKnown RBP8.64□□□□□ -1.03
CAPN2-209ENST00000487223 EXOC5O00471 708 aa8.64□□□□□ -1.03
CAPN2-209ENST00000487223 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
CAPN2-209ENST00000487223 HDGFL2Q7Z4V5 671 aaPredicted RBP8.64□□□□□ -1.03
CAPN2-209ENST00000487223 PMFBP1Q8TBY8 1022 aa8.64□□□□□ -1.03
CAPN2-209ENST00000487223 ITGB4P16144 1822 aa8.64□□□□□ -1.03
CAPN2-209ENST00000487223 A0A0U1RQG5 324 aaPredicted RBP8.64□□□□□ -1.03
CAPN2-209ENST00000487223 IL2RBP14784 551 aa8.64□□□□□ -1.03
CAPN2-209ENST00000487223 ROCK2O75116 1388 aaKnown RBP8.63□□□□□ -1.03
CAPN2-209ENST00000487223 LMOD2Q6P5Q4 547 aa8.63□□□□□ -1.03
CAPN2-209ENST00000487223 SMARCC1Q92922 1105 aaPredicted RBP8.63□□□□□ -1.03
CAPN2-209ENST00000487223 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
CAPN2-209ENST00000487223 R3HDM1Q15032 1099 aaKnown RBP8.63□□□□□ -1.03
CAPN2-209ENST00000487223 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
CAPN2-209ENST00000487223 TRIM37O94972 964 aa8.62□□□□□ -1.03
CAPN2-209ENST00000487223 MARCH10Q8NA82 808 aaPredicted RBP8.62□□□□□ -1.03
CAPN2-209ENST00000487223 YY1P25490 414 aa8.61□□□□□ -1.03
CAPN2-209ENST00000487223 TXNRD1Q16881 649 aa8.61□□□□□ -1.03
CAPN2-209ENST00000487223 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.61□□□□□ -1.03
CAPN2-209ENST00000487223 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
CAPN2-209ENST00000487223 A0A1W2PP64 1363 aa8.61□□□□□ -1.03
CAPN2-209ENST00000487223 PDZRN3Q9UPQ7 1066 aa8.61□□□□□ -1.03
CAPN2-209ENST00000487223 IGSF3O75054 1194 aa8.6□□□□□ -1.03
CAPN2-209ENST00000487223 POLD1P28340 1107 aa8.6□□□□□ -1.03
CAPN2-209ENST00000487223 CDK11BP21127 795 aaKnown RBP8.59□□□□□ -1.03
CAPN2-209ENST00000487223 FLT4P35916 1363 aa8.59□□□□□ -1.03
CAPN2-209ENST00000487223 UBR2Q8IWV8 1755 aa8.59□□□□□ -1.03
CAPN2-209ENST00000487223 ECM2O94769 699 aaPredicted RBP8.59□□□□□ -1.03
CAPN2-209ENST00000487223 NLRP6P59044 892 aa8.59□□□□□ -1.03
CAPN2-209ENST00000487223 NEUROD1Q13562 356 aa8.59□□□□□ -1.03
CAPN2-209ENST00000487223 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
CAPN2-209ENST00000487223 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
CAPN2-209ENST00000487223 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
CAPN2-209ENST00000487223 AAMPQ13685 434 aa8.58□□□□□ -1.04
CAPN2-209ENST00000487223 TOM1L2Q6ZVM7 507 aa8.58□□□□□ -1.04
CAPN2-209ENST00000487223 PPP1R1BQ9UD71 204 aaPredicted RBP8.58□□□□□ -1.04
CAPN2-209ENST00000487223 KDRP35968 1356 aa8.58□□□□□ -1.04
CAPN2-209ENST00000487223 PAK3O75914 559 aaPredicted RBP8.58□□□□□ -1.04
CAPN2-209ENST00000487223 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
CAPN2-209ENST00000487223 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
CAPN2-209ENST00000487223 THSD7BQ9C0I4 1608 aa8.57□□□□□ -1.04
CAPN2-209ENST00000487223 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
CAPN2-209ENST00000487223 KDM6AO15550 1401 aaPredicted RBP8.57□□□□□ -1.04
CAPN2-209ENST00000487223 TJP1Q07157 1748 aa8.57□□□□□ -1.04
CAPN2-209ENST00000487223 SCN11AQ9UI33 1791 aa8.56□□□□□ -1.04
CAPN2-209ENST00000487223 SSFA2P28290 1259 aa8.56□□□□□ -1.04
CAPN2-209ENST00000487223 WDR90Q96KV7 1748 aa8.56□□□□□ -1.04
CAPN2-209ENST00000487223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
CAPN2-209ENST00000487223 SCN7AQ01118 1682 aa8.55□□□□□ -1.04
CAPN2-209ENST00000487223 RGPD2P0DJD1 1756 aa8.55□□□□□ -1.04
CAPN2-209ENST00000487223 C1QTNF8P60827 252 aa8.55□□□□□ -1.04
CAPN2-209ENST00000487223 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
CAPN2-209ENST00000487223 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
CAPN2-209ENST00000487223 ATP10DQ9P241 1426 aa8.54□□□□□ -1.04
CAPN2-209ENST00000487223 MEGF6O75095 1541 aa8.54□□□□□ -1.04
CAPN2-209ENST00000487223 HSP90AB1P08238 724 aaKnown RBP8.54□□□□□ -1.04
CAPN2-209ENST00000487223 SYT17Q9BSW7 474 aa8.54□□□□□ -1.04
CAPN2-209ENST00000487223 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
CAPN2-209ENST00000487223 NPC1L1Q9UHC9 1359 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms