RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 SKAP1Q86WV1 359 aa15.91■□□□□ 0.14
HDLBP-241ENST00000487169 IDH1O75874 414 aaKnown RBP15.91■□□□□ 0.14
HDLBP-241ENST00000487169 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
HDLBP-241ENST00000487169 KIF1BPQ96EK5 621 aa15.91■□□□□ 0.14
HDLBP-241ENST00000487169 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
HDLBP-241ENST00000487169 NUTM1Q86Y26 1132 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 ABCF2Q9UG63 623 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 THOC2Q8NI27 1593 aaKnown RBP15.9■□□□□ 0.14
HDLBP-241ENST00000487169 ANKRD1Q15327 319 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 KRT28Q7Z3Y7 464 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 OLFM4Q6UX06 510 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 TRIM22Q8IYM9 498 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 LRP2BPQ9P2M1 347 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 GPATCH8Q9UKJ3 1502 aaKnown RBP15.9■□□□□ 0.14
HDLBP-241ENST00000487169 FBLN1P23142 703 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 ALDH1L2Q3SY69 923 aa15.9■□□□□ 0.14
HDLBP-241ENST00000487169 NAT10Q9H0A0 1025 aaKnown RBP15.9■□□□□ 0.14
HDLBP-241ENST00000487169 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
HDLBP-241ENST00000487169 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
HDLBP-241ENST00000487169 NASPP49321 788 aaPredicted RBP15.89■□□□□ 0.13
HDLBP-241ENST00000487169 RAI14Q9P0K7 980 aa15.89■□□□□ 0.13
HDLBP-241ENST00000487169 ACEP12821 1306 aa15.89■□□□□ 0.13
HDLBP-241ENST00000487169 MRE11P49959 708 aa15.88■□□□□ 0.13
HDLBP-241ENST00000487169 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
HDLBP-241ENST00000487169 K7ELQ4 463 aaPredicted RBP15.88■□□□□ 0.13
HDLBP-241ENST00000487169 OFD1O75665 1012 aa15.88■□□□□ 0.13
HDLBP-241ENST00000487169 METTL24Q5JXM2 366 aa15.88■□□□□ 0.13
HDLBP-241ENST00000487169 LARP1BQ659C4 914 aaKnown RBP15.88■□□□□ 0.13
HDLBP-241ENST00000487169 CCDC70Q6NSX1 233 aa15.88■□□□□ 0.13
HDLBP-241ENST00000487169 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
HDLBP-241ENST00000487169 TDO2P48775 406 aa15.88■□□□□ 0.13
HDLBP-241ENST00000487169 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
HDLBP-241ENST00000487169 DBF4Q9UBU7 674 aaPredicted RBP15.88■□□□□ 0.13
HDLBP-241ENST00000487169 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
HDLBP-241ENST00000487169 GLRX3O76003 335 aaKnown RBP15.87■□□□□ 0.13
HDLBP-241ENST00000487169 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 NUP133Q8WUM0 1156 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 NGLY1Q96IV0 654 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 MYD88Q99836 296 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 TRIM5Q9C035 493 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
HDLBP-241ENST00000487169 ZNF396Q96N95 335 aaPredicted RBP15.87■□□□□ 0.13
HDLBP-241ENST00000487169 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
HDLBP-241ENST00000487169 TXLNAP40222 546 aa15.86■□□□□ 0.13
HDLBP-241ENST00000487169 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■■□□□ 12.4
HDLBP-241ENST00000487169 WDR33Q9C0J8 1336 aaKnown RBP15.85■□□□□ 0.13
HDLBP-241ENST00000487169 MX1P20591 662 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 UPF3BQ9BZI7 483 aaKnown RBP15.85■□□□□ 0.13
HDLBP-241ENST00000487169 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 R3HCC1Q9Y3T6 440 aaKnown RBP15.85■□□□□ 0.13
HDLBP-241ENST00000487169 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 ATP10BO94823 1461 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 EXOC5O00471 708 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 FLIIQ13045 1269 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 ZNF652Q9Y2D9 606 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 ME1P48163 572 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 KRT85P78386 507 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 ZSCAN29Q8IWY8 852 aaPredicted RBP15.85■□□□□ 0.13
HDLBP-241ENST00000487169 UBAC1Q9BSL1 405 aa15.85■□□□□ 0.13
HDLBP-241ENST00000487169 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 TRIM27P14373 513 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 KRT32Q14532 448 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 A0A087WZG4 1122 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 FAM83GA6ND36 823 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 HSP90AB2PQ58FF8 381 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 PDILTQ8N807 584 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
HDLBP-241ENST00000487169 NAP1L1P55209 391 aaKnown RBP15.84■□□□□ 0.13
HDLBP-241ENST00000487169 ADAMTS12P58397 1594 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 CDK5RAP3Q96JB5 506 aa15.84■□□□□ 0.13
HDLBP-241ENST00000487169 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.13
HDLBP-241ENST00000487169 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.13
HDLBP-241ENST00000487169 FAM43AQ8N2R8 423 aa15.83■□□□□ 0.13
HDLBP-241ENST00000487169 LRRFIP2Q9Y608 721 aaKnown RBP15.83■□□□□ 0.13
HDLBP-241ENST00000487169 PDRG1Q9NUG6 133 aa15.83■□□□□ 0.12
HDLBP-241ENST00000487169 KDM5BQ9UGL1 1544 aa15.83■□□□□ 0.12
HDLBP-241ENST00000487169 AIDAQ96BJ3 306 aa15.83■□□□□ 0.12
HDLBP-241ENST00000487169 ZBTB3Q9H5J0 574 aa15.83■□□□□ 0.12
HDLBP-241ENST00000487169 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
HDLBP-241ENST00000487169 IFIT1P09914 478 aaKnown RBP15.82■□□□□ 0.12
HDLBP-241ENST00000487169 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
HDLBP-241ENST00000487169 TNRQ92752 1358 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 ZPR1O75312 459 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 EPS15P42566 896 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 IFIT5Q13325 482 aaKnown RBP15.82■□□□□ 0.12
HDLBP-241ENST00000487169 CCAR1Q8IX12 1150 aaKnown RBP15.82■□□□□ 0.12
HDLBP-241ENST00000487169 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 AKAP2Q9Y2D5 859 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-241ENST00000487169 PLCH2O75038 1416 aa15.82■□□□□ 0.12
HDLBP-241ENST00000487169 TCOF1Q13428 1488 aaKnown RBP15.81■□□□□ 0.12
HDLBP-241ENST00000487169 NKTRP30414 1462 aaKnown RBP15.81■□□□□ 0.12
HDLBP-241ENST00000487169 LETM1O95202 739 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms