RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 KAT6BQ8WYB5 2073 aa25■■□□□ 1.59
PCOLCE-207ENST00000486440 CCDC184Q52MB2 194 aa25■■□□□ 1.59
PCOLCE-207ENST00000486440 MARCH10Q8NA82 808 aaPredicted RBP25■■□□□ 1.59
PCOLCE-207ENST00000486440 RAPGEF4Q8WZA2 1011 aa25■■□□□ 1.59
PCOLCE-207ENST00000486440 HMOX1P09601 288 aa24.99■■□□□ 1.59
PCOLCE-207ENST00000486440 TATP17735 454 aaPredicted RBP24.99■■□□□ 1.59
PCOLCE-207ENST00000486440 VIRMAQ69YN4 1812 aaKnown RBP24.98■■□□□ 1.59
PCOLCE-207ENST00000486440 U2SURPO15042 1029 aaKnown RBP24.98■■□□□ 1.59
PCOLCE-207ENST00000486440 PDE3BQ13370 1112 aa24.98■■□□□ 1.59
PCOLCE-207ENST00000486440 ZCRB1Q8TBF4 217 aaKnown RBP24.97■■□□□ 1.59
PCOLCE-207ENST00000486440 NUDCQ9Y266 331 aa24.95■■□□□ 1.58
PCOLCE-207ENST00000486440 RSPH6AQ9H0K4 717 aa24.93■■□□□ 1.58
PCOLCE-207ENST00000486440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.93■■□□□ 1.58
PCOLCE-207ENST00000486440 PLEKHG2Q9H7P9 1386 aa24.93■■□□□ 1.58
PCOLCE-207ENST00000486440 U2AF1L5P0DN76 240 aaPredicted RBP24.92■■□□□ 1.58
PCOLCE-207ENST00000486440 U2AF1Q01081 240 aaKnown RBP eCLIP24.92■■□□□ 1.58
PCOLCE-207ENST00000486440 DDX54Q8TDD1 881 aaKnown RBP24.92■■□□□ 1.58
PCOLCE-207ENST00000486440 SOCS7O14512 581 aa24.91■■□□□ 1.58
PCOLCE-207ENST00000486440 CYP27B1O15528 508 aa24.91■■□□□ 1.58
PCOLCE-207ENST00000486440 DIEXFQ68CQ4 756 aaKnown RBP24.91■■□□□ 1.58
PCOLCE-207ENST00000486440 ITGB4P16144 1822 aa24.91■■□□□ 1.58
PCOLCE-207ENST00000486440 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
PCOLCE-207ENST00000486440 TOGARAM1Q9Y4F4 1720 aa24.89■■□□□ 1.58
PCOLCE-207ENST00000486440 BCL9O00512 1426 aa24.89■■□□□ 1.58
PCOLCE-207ENST00000486440 SPG7Q9UQ90 795 aa24.89■■□□□ 1.58
PCOLCE-207ENST00000486440 DOT1LQ8TEK3 1739 aa24.89■■□□□ 1.57
PCOLCE-207ENST00000486440 TNS1Q9HBL0 1735 aaKnown RBP24.89■■□□□ 1.57
PCOLCE-207ENST00000486440 FCHSD2O94868 740 aa24.88■■□□□ 1.57
PCOLCE-207ENST00000486440 FAM196AQ6ZSG2 479 aa24.88■■□□□ 1.57
PCOLCE-207ENST00000486440 PHACTR3Q96KR7 559 aa24.88■■□□□ 1.57
PCOLCE-207ENST00000486440 PLEKHO1Q53GL0 409 aaPredicted RBP24.87■■□□□ 1.57
PCOLCE-207ENST00000486440 SCN11AQ9UI33 1791 aa24.87■■□□□ 1.57
PCOLCE-207ENST00000486440 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
PCOLCE-207ENST00000486440 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
PCOLCE-207ENST00000486440 PRKAR2BP31323 418 aa24.86■■□□□ 1.57
PCOLCE-207ENST00000486440 NHSQ6T4R5 1651 aa24.85■■□□□ 1.57
PCOLCE-207ENST00000486440 AMOTQ4VCS5 1084 aa24.85■■□□□ 1.57
PCOLCE-207ENST00000486440 UPF1Q92900 1129 aaKnown RBP eCLIP24.85■■□□□ 1.57
PCOLCE-207ENST00000486440 PLEKHF1Q96S99 279 aa24.85■■□□□ 1.57
PCOLCE-207ENST00000486440 PHKG2P15735 406 aa24.84■■□□□ 1.57
PCOLCE-207ENST00000486440 NKX1-1Q15270 411 aaPredicted RBP24.84■■□□□ 1.57
PCOLCE-207ENST00000486440 MTHFSDQ2M296 383 aaKnown RBP24.84■■□□□ 1.57
PCOLCE-207ENST00000486440 PTF1AQ7RTS3 328 aa24.84■■□□□ 1.57
PCOLCE-207ENST00000486440 ADAMTS8Q9UP79 889 aa24.84■■□□□ 1.57
PCOLCE-207ENST00000486440 BTAF1O14981 1849 aa24.82■■□□□ 1.56
PCOLCE-207ENST00000486440 ZNF530Q6P9A1 599 aaPredicted RBP24.82■■□□□ 1.56
PCOLCE-207ENST00000486440 IFNL2Q8IZJ0 200 aa24.82■■□□□ 1.56
PCOLCE-207ENST00000486440 PNISRQ8TF01 805 aaKnown RBP24.82■■□□□ 1.56
PCOLCE-207ENST00000486440 ADAMTS7Q9UKP4 1686 aa24.81■■□□□ 1.56
PCOLCE-207ENST00000486440 TRIM37O94972 964 aa24.81■■□□□ 1.56
PCOLCE-207ENST00000486440 MRS2Q9HD23 443 aa24.81■■□□□ 1.56
PCOLCE-207ENST00000486440 KCNQ2O43526 872 aa24.8■■□□□ 1.56
PCOLCE-207ENST00000486440 MIER1Q8N108 512 aa24.78■■□□□ 1.56
PCOLCE-207ENST00000486440 ACSBG1Q96GR2 724 aa24.78■■□□□ 1.56
PCOLCE-207ENST00000486440 KDM6AO15550 1401 aaPredicted RBP24.78■■□□□ 1.56
PCOLCE-207ENST00000486440 WDR43Q15061 677 aaKnown RBP eCLIP24.77■■□□□ 1.56
PCOLCE-207ENST00000486440 PRIM1P49642 420 aaKnown RBP24.75■■□□□ 1.55
PCOLCE-207ENST00000486440 AKAP4Q5JQC9 854 aa24.75■■□□□ 1.55
PCOLCE-207ENST00000486440 BCL11BQ9C0K0 894 aaPredicted RBP24.75■■□□□ 1.55
PCOLCE-207ENST00000486440 SIPA1L3O60292 1781 aaPredicted RBP24.75■■□□□ 1.55
PCOLCE-207ENST00000486440 CCDC125Q86Z20 511 aa24.74■■□□□ 1.55
PCOLCE-207ENST00000486440 CCDC146Q8IYE0 955 aa24.74■■□□□ 1.55
PCOLCE-207ENST00000486440 C1orf141Q5JVX7 400 aa24.73■■□□□ 1.55
PCOLCE-207ENST00000486440 MPRIPQ6WCQ1 1025 aa24.73■■□□□ 1.55
PCOLCE-207ENST00000486440 GAS2L2Q8NHY3 880 aa24.73■■□□□ 1.55
PCOLCE-207ENST00000486440 LGR6Q9HBX8 967 aa24.73■■□□□ 1.55
PCOLCE-207ENST00000486440 DCAF5Q96JK2 942 aa24.72■■□□□ 1.55
PCOLCE-207ENST00000486440 PNNQ9H307 717 aaKnown RBP24.72■■□□□ 1.55
PCOLCE-207ENST00000486440 CCER2I3L3R5 266 aa24.71■■□□□ 1.55
PCOLCE-207ENST00000486440 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
PCOLCE-207ENST00000486440 RUNDC1Q96C34 613 aa24.7■■□□□ 1.54
PCOLCE-207ENST00000486440 RGPD3A6NKT7 1758 aaPredicted RBP24.7■■□□□ 1.54
PCOLCE-207ENST00000486440 RGPD4Q7Z3J3 1758 aa24.7■■□□□ 1.54
PCOLCE-207ENST00000486440 LY75O60449 1722 aa24.69■■□□□ 1.54
PCOLCE-207ENST00000486440 MAP3K5Q99683 1374 aa24.69■■□□□ 1.54
PCOLCE-207ENST00000486440 IL17REQ8NFR9 667 aa24.69■■□□□ 1.54
PCOLCE-207ENST00000486440 GNAT3A8MTJ3 354 aa24.68■■□□□ 1.54
PCOLCE-207ENST00000486440 ERVV-2B6SEH9 535 aa24.68■■□□□ 1.54
PCOLCE-207ENST00000486440 RNMTO43148 476 aaKnown RBP24.68■■□□□ 1.54
PCOLCE-207ENST00000486440 NFE2L2Q16236 605 aa24.68■■□□□ 1.54
PCOLCE-207ENST00000486440 DEFB132Q7Z7B7 95 aa24.68■■□□□ 1.54
PCOLCE-207ENST00000486440 APBA3O96018 575 aa24.67■■□□□ 1.54
PCOLCE-207ENST00000486440 SYTL4Q96C24 671 aaPredicted RBP24.67■■□□□ 1.54
PCOLCE-207ENST00000486440 TMPOP42166 694 aaKnown RBP24.66■■□□□ 1.54
PCOLCE-207ENST00000486440 PIGBQ92521 554 aa24.66■■□□□ 1.54
PCOLCE-207ENST00000486440 MAPK8IP3Q9UPT6 1336 aa24.65■■□□□ 1.54
PCOLCE-207ENST00000486440 MRC1P22897 1456 aa24.65■■□□□ 1.54
PCOLCE-207ENST00000486440 RREB1Q92766 1687 aa24.65■■□□□ 1.54
PCOLCE-207ENST00000486440 NEFMP07197 916 aa24.64■■□□□ 1.54
PCOLCE-207ENST00000486440 CEMIPQ8WUJ3 1361 aa24.64■■□□□ 1.53
PCOLCE-207ENST00000486440 PLSCR1O15162 318 aa24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 EN1Q05925 392 aaPredicted RBP24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 SF3B2Q13435 895 aaKnown RBP24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 DCTN1Q14203 1278 aa24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 FAM9BQ8IZU0 186 aa24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 NFATC2IPQ8NCF5 419 aa24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 CAMKK2Q96RR4 588 aa24.63■■□□□ 1.53
PCOLCE-207ENST00000486440 PAPPAQ13219 1627 aa24.62■■□□□ 1.53
PCOLCE-207ENST00000486440 PROM2Q8N271 834 aa24.62■■□□□ 1.53
PCOLCE-207ENST00000486440 RRP7AQ9Y3A4 280 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms