RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 LTN1O94822 1766 aa19.16■□□□□ 0.66
POLR2J3-204ENST00000486319 RGPD5Q99666 1765 aa19.16■□□□□ 0.66
POLR2J3-204ENST00000486319 GOLGA2Q08379 1002 aa19.15■□□□□ 0.66
POLR2J3-204ENST00000486319 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
POLR2J3-204ENST00000486319 U2SURPO15042 1029 aaKnown RBP19.15■□□□□ 0.66
POLR2J3-204ENST00000486319 ERICH6BQ5W0A0 696 aa19.15■□□□□ 0.66
POLR2J3-204ENST00000486319 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
POLR2J3-204ENST00000486319 PPM1GO15355 546 aaPredicted RBP19.14■□□□□ 0.65
POLR2J3-204ENST00000486319 EXOC5O00471 708 aa19.13■□□□□ 0.65
POLR2J3-204ENST00000486319 HSP90AB2PQ58FF8 381 aa19.13■□□□□ 0.65
POLR2J3-204ENST00000486319 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
POLR2J3-204ENST00000486319 RNF123Q5XPI4 1314 aa19.12■□□□□ 0.65
POLR2J3-204ENST00000486319 IL2RBP14784 551 aa19.12■□□□□ 0.65
POLR2J3-204ENST00000486319 FLT4P35916 1363 aa19.11■□□□□ 0.65
POLR2J3-204ENST00000486319 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
POLR2J3-204ENST00000486319 TRIM37O94972 964 aa19.1■□□□□ 0.65
POLR2J3-204ENST00000486319 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
POLR2J3-204ENST00000486319 DEFB132Q7Z7B7 95 aa19.1■□□□□ 0.65
POLR2J3-204ENST00000486319 DISP2A7MBM2 1401 aa19.1■□□□□ 0.65
POLR2J3-204ENST00000486319 RCAN3Q9UKA8 241 aa19.1■□□□□ 0.65
POLR2J3-204ENST00000486319 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
POLR2J3-204ENST00000486319 FCHSD2O94868 740 aa19.09■□□□□ 0.65
POLR2J3-204ENST00000486319 BAG6P46379 1132 aa19.09■□□□□ 0.65
POLR2J3-204ENST00000486319 SLFN5Q08AF3 891 aa19.09■□□□□ 0.65
POLR2J3-204ENST00000486319 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
POLR2J3-204ENST00000486319 E9PSI1 815 aa19.08■□□□□ 0.64
POLR2J3-204ENST00000486319 DUSP27Q5VZP5 1158 aa19.08■□□□□ 0.64
POLR2J3-204ENST00000486319 WWC1Q8IX03 1113 aa19.08■□□□□ 0.64
POLR2J3-204ENST00000486319 MARCH10Q8NA82 808 aaPredicted RBP19.08■□□□□ 0.64
POLR2J3-204ENST00000486319 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.64
POLR2J3-204ENST00000486319 IL13P35225 146 aa19.07■□□□□ 0.64
POLR2J3-204ENST00000486319 NBPF6Q5VWK0 638 aa19.07■□□□□ 0.64
POLR2J3-204ENST00000486319 TRMT2AQ8IZ69 625 aaKnown RBP19.07■□□□□ 0.64
POLR2J3-204ENST00000486319 NBPF4Q96M43 638 aa19.07■□□□□ 0.64
POLR2J3-204ENST00000486319 PEAK1Q9H792 1746 aa19.07■□□□□ 0.64
POLR2J3-204ENST00000486319 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
POLR2J3-204ENST00000486319 NEFMP07197 916 aa19.05■□□□□ 0.64
POLR2J3-204ENST00000486319 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
POLR2J3-204ENST00000486319 LRRC37A3O60309 1634 aa19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 APBA3O96018 575 aa19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 EN1Q05925 392 aaPredicted RBP19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 USHBP1Q8N6Y0 703 aa19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
POLR2J3-204ENST00000486319 TNS2Q63HR2 1409 aa19.03■□□□□ 0.64
POLR2J3-204ENST00000486319 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
POLR2J3-204ENST00000486319 RGPD1P0DJD0 1748 aa19.02■□□□□ 0.64
POLR2J3-204ENST00000486319 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
POLR2J3-204ENST00000486319 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.64
POLR2J3-204ENST00000486319 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
POLR2J3-204ENST00000486319 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
POLR2J3-204ENST00000486319 FAM208AQ9UK61 1670 aaKnown RBP19■□□□□ 0.63
POLR2J3-204ENST00000486319 BCL9O00512 1426 aa19■□□□□ 0.63
POLR2J3-204ENST00000486319 PRKAR2BP31323 418 aa19■□□□□ 0.63
POLR2J3-204ENST00000486319 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
POLR2J3-204ENST00000486319 BCL11BQ9C0K0 894 aaPredicted RBP19■□□□□ 0.63
POLR2J3-204ENST00000486319 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
POLR2J3-204ENST00000486319 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
POLR2J3-204ENST00000486319 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
POLR2J3-204ENST00000486319 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
POLR2J3-204ENST00000486319 EYA1Q99502 592 aa18.99■□□□□ 0.63
POLR2J3-204ENST00000486319 DLG5Q8TDM6 1919 aa18.98■□□□□ 0.63
POLR2J3-204ENST00000486319 HMOX1P09601 288 aa18.98■□□□□ 0.63
POLR2J3-204ENST00000486319 EZH2Q15910 746 aaKnown RBP18.98■□□□□ 0.63
POLR2J3-204ENST00000486319 CAMKK2Q96RR4 588 aa18.98■□□□□ 0.63
POLR2J3-204ENST00000486319 PPP4R2Q9NY27 417 aa18.97■□□□□ 0.63
POLR2J3-204ENST00000486319 MEGF6O75095 1541 aa18.96■□□□□ 0.63
POLR2J3-204ENST00000486319 RIPK4P57078 832 aa18.96■□□□□ 0.63
POLR2J3-204ENST00000486319 PTF1AQ7RTS3 328 aa18.96■□□□□ 0.63
POLR2J3-204ENST00000486319 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
POLR2J3-204ENST00000486319 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
POLR2J3-204ENST00000486319 ACSBG1Q96GR2 724 aa18.95■□□□□ 0.62
POLR2J3-204ENST00000486319 IL16Q14005 1332 aa18.95■□□□□ 0.62
POLR2J3-204ENST00000486319 KCNQ2O43526 872 aa18.95■□□□□ 0.62
POLR2J3-204ENST00000486319 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
POLR2J3-204ENST00000486319 TRIM35Q9UPQ4 493 aa18.95■□□□□ 0.62
POLR2J3-204ENST00000486319 RGPD2P0DJD1 1756 aa18.94■□□□□ 0.62
POLR2J3-204ENST00000486319 PLSCR1O15162 318 aa18.93■□□□□ 0.62
POLR2J3-204ENST00000486319 TNS1Q9HBL0 1735 aaKnown RBP18.92■□□□□ 0.62
POLR2J3-204ENST00000486319 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
POLR2J3-204ENST00000486319 LMOD3Q0VAK6 560 aa18.91■□□□□ 0.62
POLR2J3-204ENST00000486319 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
POLR2J3-204ENST00000486319 PHACTR3Q96KR7 559 aa18.91■□□□□ 0.62
POLR2J3-204ENST00000486319 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
POLR2J3-204ENST00000486319 PCDH11XQ9BZA7 1347 aa18.9■□□□□ 0.62
POLR2J3-204ENST00000486319 PCDH11YQ9BZA8 1340 aa18.9■□□□□ 0.62
POLR2J3-204ENST00000486319 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
POLR2J3-204ENST00000486319 SPG7Q9UQ90 795 aa18.9■□□□□ 0.62
POLR2J3-204ENST00000486319 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
POLR2J3-204ENST00000486319 SYTL4Q96C24 671 aaPredicted RBP18.89■□□□□ 0.61
POLR2J3-204ENST00000486319 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-204ENST00000486319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.61
POLR2J3-204ENST00000486319 KDRP35968 1356 aa18.88■□□□□ 0.61
POLR2J3-204ENST00000486319 CYP27B1O15528 508 aa18.87■□□□□ 0.61
POLR2J3-204ENST00000486319 CT47B1P0C2W7 299 aaPredicted RBP18.87■□□□□ 0.61
POLR2J3-204ENST00000486319 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
POLR2J3-204ENST00000486319 SBF2Q86WG5 1849 aa18.87■□□□□ 0.61
POLR2J3-204ENST00000486319 NBPF14Q5TI25 921 aa18.86■□□□□ 0.61
POLR2J3-204ENST00000486319 PSDA5PKW4 1024 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms